Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0148
(810 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0134 + 26805329-26805430,26807130-26807230,26807876-268080... 71 8e-13
05_05_0231 + 23488588-23488689,23488775-23488875,23489012-234891... 64 1e-10
01_01_0858 - 6699126-6699128,6699219-6699318,6700052-6700278,670... 62 7e-10
09_02_0115 + 4413714-4414475 32 0.47
07_03_0856 - 22037345-22037665,22037962-22038108,22038201-220389... 31 1.4
06_01_0724 + 5299278-5299542,5299690-5299950,5300246-5300351,530... 31 1.4
11_05_0100 - 19056465-19056470,19057043-19057276,19058391-190585... 30 2.5
10_06_0187 - 11598240-11599508 30 2.5
12_02_0312 + 17395716-17398112 29 3.3
10_08_0762 - 20410681-20411834,20411999-20412098,20412200-204122... 29 4.4
03_01_0005 + 46370-46454,46962-47071,47381-47545,47672-48463,487... 29 4.4
02_05_1203 - 34934635-34934749,34934865-34934923,34935019-349351... 29 4.4
01_06_1113 + 34613668-34614075,34614781-34614970,34615264-346153... 29 4.4
03_06_0108 + 31708713-31709079,31709258-31709822,31709933-317100... 29 5.8
09_01_0017 + 383921-384250,384407-384478,385490-385654,385737-38... 28 7.6
>01_06_0134 +
26805329-26805430,26807130-26807230,26807876-26808032,
26808386-26808582,26809188-26809287,26809501-26809536
Length = 230
Score = 71.3 bits (167), Expect = 8e-13
Identities = 37/88 (42%), Positives = 57/88 (64%)
Frame = +1
Query: 247 KEGKQVELQKKIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYSELLVT 426
++ KQVE++KKI+ S LN +R+KVL+ ++D V ++ ++A K+L V + Y LL
Sbjct: 57 RKEKQVEVRKKIEYSMQLNASRIKVLQAQDDLVNSMKEDATKQLLRVSHNHHEYKNLLKE 116
Query: 427 LIVQALFQLMEPTVTIRVRQTDKALVES 510
L+VQ L +L EP V +R R+ D VES
Sbjct: 117 LVVQGLLRLKEPAVLLRCRKEDHHHVES 144
Score = 45.2 bits (102), Expect = 6e-05
Identities = 23/58 (39%), Positives = 33/58 (56%)
Frame = +2
Query: 80 LSDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMEYYEKK 253
++DADV KQI+ M+ FI Q FNIEK +LV+ ++ KI + YE+K
Sbjct: 1 MNDADVAKQIQQMVRFIRQEAEEKASEISVSAEEEFNIEKLQLVEAEKKKIRQEYERK 58
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/40 (47%), Positives = 29/40 (72%)
Frame = +3
Query: 606 GGIELVAARGRIKISNTLESRLELIAQQLLPEIRNALFGR 725
GG+ L + G+I NTL++RLE++ ++ LPEIR LFG+
Sbjct: 188 GGVVLASRDGKIVCENTLDARLEVVFRKKLPEIRKLLFGQ 227
>05_05_0231 +
23488588-23488689,23488775-23488875,23489012-23489168,
23489365-23489594,23489696-23489795,23489878-23489916
Length = 242
Score = 64.5 bits (150), Expect = 1e-10
Identities = 42/113 (37%), Positives = 63/113 (55%), Gaps = 11/113 (9%)
Frame = +1
Query: 226 QDYGIL*KEGKQVELQKKIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKL 405
QDY ++ KQV++ +KI+ S LN AR+KVL+ ++ V + ++A K L V KD
Sbjct: 53 QDYE---RKAKQVDVGRKIEYSTQLNAARIKVLRAQDGVVGEMKEDAGKSLLRVTKDATA 109
Query: 406 YSELLVTLIV-----------QALFQLMEPTVTIRVRQTDKALVESCSEKLNK 531
Y ++L LIV Q+L +L EP+V +R R+ D+ VES E K
Sbjct: 110 YRKVLKGLIVQRKDSEIIDQIQSLLRLREPSVVLRCREADRGHVESVLEAAKK 162
Score = 42.3 bits (95), Expect = 4e-04
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +2
Query: 80 LSDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMEYYEKK 253
++DADV KQI+ M+ FI Q FNIEK +LV+ ++ +I + YE+K
Sbjct: 1 MNDADVGKQIQQMVRFILQEAEEKASEISVAAEEEFNIEKLQLVESEKRRIRQDYERK 58
Score = 40.3 bits (90), Expect = 0.002
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = +3
Query: 594 PDTCGGIELVAARGRIKISNTLESRLELIAQQLLPEIRNALFGR 725
P GG+ + + G+I NTL++R+E+ +Q LPEIR LF +
Sbjct: 195 PFCSGGVVIASQDGKIVCDNTLDARVEISFKQKLPEIRKKLFSQ 238
>01_01_0858 -
6699126-6699128,6699219-6699318,6700052-6700278,
6701032-6701188,6701422-6701522,6702147-6702251
Length = 230
Score = 61.7 bits (143), Expect = 7e-10
Identities = 37/98 (37%), Positives = 57/98 (58%), Gaps = 10/98 (10%)
Frame = +1
Query: 256 KQVELQKKIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYSELLVTLIV 435
KQ +++KKI+ S LN +RL+VL+ ++D ++L+ A K L + +D +Y LL IV
Sbjct: 61 KQGDIKKKIEYSKQLNASRLEVLQAQDDLAMSMLEAAGKELLYITRDHHVYKNLLRIFIV 120
Query: 436 Q----------ALFQLMEPTVTIRVRQTDKALVESCSE 519
Q +L +L EP V +R R+ D+ LVES E
Sbjct: 121 QDKLTKKNPEQSLLRLKEPAVILRCRKEDRELVESVLE 158
Score = 35.9 bits (79), Expect = 0.038
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +3
Query: 594 PDTCGGIELVAARGRIKISNTLESRLELIAQQLLPE 701
P GG+ L + G+I NTL++RLE++ ++ LPE
Sbjct: 195 PSCSGGVVLASRDGKIVCENTLDARLEVVFRKKLPE 230
Score = 32.7 bits (71), Expect = 0.36
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = +2
Query: 80 LSDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMEYYEK 250
++D DV +Q+K M FI Q F IEK +LV+ ++ +I +E+
Sbjct: 2 MNDGDVARQLKQMTDFIRQEAVEKAAEIEAAAAEEFQIEKLQLVEAEKKRIRLEFER 58
>09_02_0115 + 4413714-4414475
Length = 253
Score = 32.3 bits (70), Expect = 0.47
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = +3
Query: 408 LRAAGHTYCAGSLPAHGTHCHHPRPSNRQGSGGVL 512
LR H+ + SLP H HHPRP +GS G L
Sbjct: 20 LRLFSHSSASASLPLLLGHFHHPRPVPPRGSPGDL 54
>07_03_0856 -
22037345-22037665,22037962-22038108,22038201-22038978,
22039092-22039384,22039663-22039758
Length = 544
Score = 30.7 bits (66), Expect = 1.4
Identities = 29/110 (26%), Positives = 45/110 (40%), Gaps = 1/110 (0%)
Frame = +3
Query: 390 KGHQTVLRAAGHTYCAGSLPAHGTHCHHPRPSNRQGSGGVLLGKAQQDYKNKIKKDVVLK 569
K HQ R + GS+P+ C H S S +LGK QD+ + + +
Sbjct: 325 KLHQFRYRGPSISMMLGSVPSIEHACLHYEDSRDGESVKYILGKLSQDF--PLLTSLSID 382
Query: 570 VDTENFLSPDTCGGIELVAARGR-IKISNTLESRLELIAQQLLPEIRNAL 716
DT +P GG+ R + + T+ S +L +L E+ AL
Sbjct: 383 FDTYELKNPVIPGGLPTAFKNLRSLMLRVTMHSNDDLAWATMLLEVAPAL 432
>06_01_0724 +
5299278-5299542,5299690-5299950,5300246-5300351,
5300633-5300697,5300759-5301233,5302239-5302347,
5302432-5302710,5303025-5303231,5303319-5303468,
5304164-5304277
Length = 676
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/56 (30%), Positives = 36/56 (64%)
Frame = +1
Query: 247 KEGKQVELQKKIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYSE 414
K G+Q+ L++KI++++M Q++ ++V E H++ +E K A++ K+ K Y +
Sbjct: 139 KVGQQIILREKIKAASMKLQSKKAAIEVLESHIK-CTEEIVK--AKIGKERKNYEK 191
>11_05_0100 -
19056465-19056470,19057043-19057276,19058391-19058546,
19059639-19059763,19059912-19059983,19060080-19060184,
19060691-19060745,19061576-19061656,19062806-19062869,
19064715-19064782,19064947-19065033,19066121-19066285,
19066310-19066429,19066485-19066607,19066738-19067019,
19067936-19068075,19068234-19068335,19068802-19068874,
19069061-19069171
Length = 722
Score = 29.9 bits (64), Expect = 2.5
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = -3
Query: 781 QQTLFVSPLN*SVNLRLGLRPKRALRISGSSCWAISSKRDSRVLLILIRPLAATSSI--P 608
Q L S +N S + G+ + I S C A+ SK D +LIL P+A + ++ P
Sbjct: 315 QSDLKGSAVNGSSHEGNGMNDNSKILIDNSCCLALYSKLDEDQVLILQSPVALSKAVKNP 374
Query: 607 PQVSGDKK 584
++ G +K
Sbjct: 375 VELDGLRK 382
>10_06_0187 - 11598240-11599508
Length = 422
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/69 (27%), Positives = 34/69 (49%)
Frame = +1
Query: 196 KGPSCPAATSQDYGIL*KEGKQVELQKKIQSSNMLNQARLKVLKVREDHVRNVLDEARKR 375
K P AAT QD +L + +Q L K + Q++++ H++ +DEA+ R
Sbjct: 92 KNPKPVAATPQDARLLSEIQEQQNLLKTYEVMVKKFQSQIQTRDTEITHLQQQIDEAKLR 151
Query: 376 LAEVPKDTK 402
+++ K K
Sbjct: 152 KSKLEKKLK 160
>12_02_0312 + 17395716-17398112
Length = 798
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = +1
Query: 274 KKIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYSELLV 423
++++ +N+ N L VLK+ D + + L L+ PKD +++ ELL+
Sbjct: 381 QEVKETNIPNTDILSVLKLSYDALPSDLRACFASLSTFPKDYEIFRELLI 430
>10_08_0762 -
20410681-20411834,20411999-20412098,20412200-20412298,
20412563-20414133,20415080-20415128
Length = 990
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/45 (37%), Positives = 27/45 (60%)
Frame = +1
Query: 307 ARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYSELLVTLIVQA 441
+RL++LK R+D++ N LD+A K+ E D + E V +QA
Sbjct: 826 SRLRILKCRDDNI-NSLDDAIKQHVEACTDQPNWDEDGVVAKIQA 869
>03_01_0005 +
46370-46454,46962-47071,47381-47545,47672-48463,
48730-48840,48935-49195,49415-49638,49735-49855,
50673-51214,51302-51488,51569-51895,52047-52197,
52287-52424,52918-53013,53276-53357,54411-54679,
54769-54882,55050-55288,55488-55715,55799-55951,
56479-56616,57061-57188,57598-57718,58142-58306,
59486-59633,59772-59898,60025-60118,60119-60268,
60577-60624,60712-60819,61040-61114,61225-61275,
61341-61487,61584-61714,61944-62031,62204-62266,
62336-62582,62830-62981,63056-63126,63214-63370,
63520-63687
Length = 2323
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +3
Query: 387 AKGHQTVLRAAGHTYCAGSLPAHGTHCHHPRPSNRQGSGGVLLGK 521
+KG V+RA Y G HG H + + S + GVL G+
Sbjct: 115 SKGSHQVMRAEWEKYLLGKAELHGLHRKNKKTSQQLKGFGVLDGE 159
>02_05_1203 -
34934635-34934749,34934865-34934923,34935019-34935120,
34935254-34935333,34935474-34935558,34935641-34935724,
34935842-34935927,34936053-34936135,34936226-34936479
Length = 315
Score = 29.1 bits (62), Expect = 4.4
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Frame = +1
Query: 226 QDYGIL*--KEGKQVELQKKIQSSNMLNQARLKVLKVREDHVRNVLDEARKR 375
+D+G++ +EGK VE K I SS +LN+ R ++ V ++ V N + +R R
Sbjct: 230 KDFGVICIRREGKDVE--KIISSSEILNECRDNIISV-DEIVPNQISSSRVR 278
>01_06_1113 +
34613668-34614075,34614781-34614970,34615264-34615372,
34615822-34615912,34615948-34616076,34616306-34616804,
34617154-34617251
Length = 507
Score = 29.1 bits (62), Expect = 4.4
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = +3
Query: 405 VLRAAGHTYCAGSLPAHGTHCHHPRPSNRQGSG--GVLLGKAQQDYKNKIKKDVVLKVDT 578
++ A G+ Y +G HGT PRP G GK + KIK D + + +
Sbjct: 93 MMGAPGNGYNSGGGSGHGTGAGAPRPMLNGGGNDRNSSAGKGGEVNHTKIKPDGIPRFTS 152
Query: 579 EN 584
EN
Sbjct: 153 EN 154
>03_06_0108 +
31708713-31709079,31709258-31709822,31709933-31710015,
31710231-31710319,31710486-31710559,31710654-31710704,
31710807-31710883,31711454-31712031,31712388-31712555,
31713364-31713417,31713456-31713467,31713554-31713715
Length = 759
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +3
Query: 426 TYCAGSLPAHGTHCHHPRPSNRQGSGGVL 512
TYCAG + G H HH ++Q GG L
Sbjct: 34 TYCAGGVDDVGHHHHHHVHQHQQQHGGGL 62
>09_01_0017 +
383921-384250,384407-384478,385490-385654,385737-385784,
385863-385940,386425-386538,386661-386753,387779-387890,
388959-389005,389116-389478
Length = 473
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = -3
Query: 295 CSKIGSSSEVQPASLLFIVFHNLETLLLDKTALFD----VELLLGLRI 164
C K+ + ++ P +LF+ + E+ + +KT FD + L GL I
Sbjct: 140 CFKVSAKDQLMPGDILFLPVNLKESSVAEKTKKFDNRNEINFLRGLEI 187
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,303,737
Number of Sequences: 37544
Number of extensions: 415988
Number of successful extensions: 1280
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1233
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1277
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2209429392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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