Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0148
(810 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF045642-4|AAK67210.1| 226|Caenorhabditis elegans Vacuolar h at... 91 1e-18
U42847-2|AAA83604.3| 430|Caenorhabditis elegans Hypothetical pr... 29 3.0
U40946-4|AAA81726.1| 414|Caenorhabditis elegans Hypothetical pr... 29 3.0
AF016682-9|AAB66189.3| 441|Caenorhabditis elegans Hypothetical ... 29 3.9
AF016682-8|AAO38605.1| 422|Caenorhabditis elegans Hypothetical ... 29 3.9
U41037-3|AAA82389.1| 378|Caenorhabditis elegans Hypothetical pr... 29 5.2
AF003385-7|AAB54247.1| 381|Caenorhabditis elegans Serpentine re... 29 5.2
Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical pr... 28 6.9
AY303575-1|AAP57297.1| 382|Caenorhabditis elegans cell death-re... 28 6.9
AC024791-9|AAF60653.1| 382|Caenorhabditis elegans Cell-death-re... 28 6.9
Z81071-2|CAB03012.1| 618|Caenorhabditis elegans Hypothetical pr... 28 9.1
>AF045642-4|AAK67210.1| 226|Caenorhabditis elegans Vacuolar h
atpase protein 8 protein.
Length = 226
Score = 90.6 bits (215), Expect = 1e-18
Identities = 45/87 (51%), Positives = 58/87 (66%)
Frame = +1
Query: 247 KEGKQVELQKKIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYSELLVT 426
K+ KQVELQ+KIQ+SN LN RL+ LK REDH+ VLDEAR L+ + D Y +L
Sbjct: 59 KKEKQVELQRKIQASNSLNAGRLRCLKAREDHIGAVLDEARSNLSRISGDAARYPAILKG 118
Query: 427 LIVQALFQLMEPTVTIRVRQTDKALVE 507
L++Q L QL+E V +R R+ D LVE
Sbjct: 119 LVMQGLLQLLEKEVVLRCREKDLRLVE 145
Score = 82.6 bits (195), Expect = 3e-16
Identities = 36/60 (60%), Positives = 48/60 (80%)
Frame = +3
Query: 570 VDTENFLSPDTCGGIELVAARGRIKISNTLESRLELIAQQLLPEIRNALFGRNPNRKFTD 749
+D +NFL ++ GG+EL A G+IK+S+TLESRLELIA Q++P++R ALFG NPNR F D
Sbjct: 167 LDKQNFLPSESAGGVELSARAGKIKVSSTLESRLELIANQIVPQVRTALFGPNPNRSFFD 226
Score = 71.7 bits (168), Expect = 6e-13
Identities = 35/58 (60%), Positives = 40/58 (68%)
Frame = +2
Query: 80 LSDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMEYYEKK 253
+SD DVQKQ++HMMAFIEQ FNIEKGRLVQQQR KIME++EKK
Sbjct: 3 ISDNDVQKQLRHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQQQRQKIMEFFEKK 60
>U42847-2|AAA83604.3| 430|Caenorhabditis elegans Hypothetical
protein F39H12.1 protein.
Length = 430
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +1
Query: 421 VTLIVQALFQL-MEPTVTIRVRQTDKALVESCSEKLNKT 534
VT ++Q + QL ME + + R++DKA +E E+LN+T
Sbjct: 347 VTDLLQIIEQLEMEKRLLLAQRRSDKAEIERLQEQLNET 385
>U40946-4|AAA81726.1| 414|Caenorhabditis elegans Hypothetical
protein W05H9.1 protein.
Length = 414
Score = 29.5 bits (63), Expect = 3.0
Identities = 25/91 (27%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Frame = +1
Query: 256 KQVELQKKIQSSNMLNQARLKVLKVREDHVRNVLDEARK-RLAEVPKDTKLYSELLVTLI 432
+Q +++K Q+S L Q R + LK + D + LDE RK +L E+ D EL+ +
Sbjct: 156 RQEQIEKWKQASEKLQQQR-EELKQQIDAAKQKLDERRKQKLEELKTDLAQVKELVTAEV 214
Query: 433 VQALFQLMEPTVTIRVRQTDKALVESCSEKL 525
+ + + + R+ +AL + ++KL
Sbjct: 215 KRRVDEKNQRLG--EQRENHEALKQQINDKL 243
>AF016682-9|AAB66189.3| 441|Caenorhabditis elegans Hypothetical
protein T07D3.9a protein.
Length = 441
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = -3
Query: 289 KIGSSSEVQPASLLFIVFHNLETLLLDKTALFDVELL 179
++GSS+ QP + F V HN+ + L+ ++ + DV +L
Sbjct: 239 RMGSSTNKQPTNEEFQVIHNMYSELVGRSMVHDVAVL 275
>AF016682-8|AAO38605.1| 422|Caenorhabditis elegans Hypothetical
protein T07D3.9b protein.
Length = 422
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = -3
Query: 289 KIGSSSEVQPASLLFIVFHNLETLLLDKTALFDVELL 179
++GSS+ QP + F V HN+ + L+ ++ + DV +L
Sbjct: 194 RMGSSTNKQPTNEEFQVIHNMYSELVGRSMVHDVAVL 230
>U41037-3|AAA82389.1| 378|Caenorhabditis elegans Hypothetical
protein T24C12.1 protein.
Length = 378
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -3
Query: 298 ACSKIGSSSEVQPASLLFIVFHNLETLLLDKTALFDVE 185
ACS IGS E FI+F+ L L ++ L + E
Sbjct: 5 ACSPIGSVPEASATQFSFILFYEPSALFLSQSILVERE 42
>AF003385-7|AAB54247.1| 381|Caenorhabditis elegans Serpentine
receptor, class w protein7 protein.
Length = 381
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/46 (26%), Positives = 26/46 (56%)
Frame = +1
Query: 406 YSELLVTLIVQALFQLMEPTVTIRVRQTDKALVESCSEKLNKTTRI 543
Y++ ++L+V L+ + + + +++T K SEK N TT++
Sbjct: 230 YADSCISLVVSTLYVFVALALVVELQRTKKRRKNLRSEKPNNTTKL 275
>Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical protein
T01H10.8 protein.
Length = 2692
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = -3
Query: 361 HQVHYVRDLHALSVPSDELGSACSKIGSSSEVQPASLLFIVFHNLETLLLDKTA 200
H V +R LSV S+E G + +++ A +FHN LLL+K A
Sbjct: 940 HSVIPIRHNQQLSVKSEEAGFT----STVEQLRAAGGFGFIFHNFTKLLLEKNA 989
>Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical protein
T01H10.8 protein.
Length = 2692
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = -3
Query: 361 HQVHYVRDLHALSVPSDELGSACSKIGSSSEVQPASLLFIVFHNLETLLLDKTA 200
H V +R LSV S+E G + +++ A +FHN LLL+K A
Sbjct: 940 HSVIPIRHNQQLSVKSEEAGFT----STVEQLRAAGGFGFIFHNFTKLLLEKNA 989
>AY303575-1|AAP57297.1| 382|Caenorhabditis elegans cell
death-related nuclease 1 protein.
Length = 382
Score = 28.3 bits (60), Expect = 6.9
Identities = 16/64 (25%), Positives = 29/64 (45%)
Frame = -2
Query: 752 LIGEFTVRVASEEGVTYLRQQLLGDQLQARLQSVADLDTSPGCNQLDTTTGVGRQKVLSV 573
L+ F VA + + L ++++ ++ DL GC+ T GVG +K + +
Sbjct: 190 LLRHFLAPVAKKIPIKEFNLSLALEEMKLSVEEFIDLCILLGCDYCGTIRGVGPKKAVEL 249
Query: 572 DFQH 561
QH
Sbjct: 250 IRQH 253
>AC024791-9|AAF60653.1| 382|Caenorhabditis elegans
Cell-death-related nuclease protein1 protein.
Length = 382
Score = 28.3 bits (60), Expect = 6.9
Identities = 16/64 (25%), Positives = 29/64 (45%)
Frame = -2
Query: 752 LIGEFTVRVASEEGVTYLRQQLLGDQLQARLQSVADLDTSPGCNQLDTTTGVGRQKVLSV 573
L+ F VA + + L ++++ ++ DL GC+ T GVG +K + +
Sbjct: 190 LLRHFLAPVAKKIPIKEFNLSLALEEMKLSVEEFIDLCILLGCDYCGTIRGVGPKKAVEL 249
Query: 572 DFQH 561
QH
Sbjct: 250 IRQH 253
>Z81071-2|CAB03012.1| 618|Caenorhabditis elegans Hypothetical
protein F28F8.2 protein.
Length = 618
Score = 27.9 bits (59), Expect = 9.1
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -3
Query: 364 LHQVHYVRDLHALSVPSDELG 302
LH++ YV D H + VP D G
Sbjct: 515 LHKLDYVADAHVVGVPDDRYG 535
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,700,313
Number of Sequences: 27780
Number of extensions: 326806
Number of successful extensions: 995
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 961
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 992
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1987863822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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