BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0147
(735 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY745209-1|AAU93476.1| 167|Anopheles gambiae cytochrome P450 pr... 25 1.8
AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein ... 25 2.4
AY928182-1|AAX22219.1| 335|Anopheles gambiae phenoloxidase inhi... 25 2.4
AY578810-1|AAT07315.1| 897|Anopheles gambiae smurf protein. 25 2.4
AY263176-1|AAP78791.1| 705|Anopheles gambiae TmcB-like protein ... 24 5.6
DQ974162-1|ABJ52802.1| 418|Anopheles gambiae serpin 3 protein. 23 9.8
>AY745209-1|AAU93476.1| 167|Anopheles gambiae cytochrome P450
protein.
Length = 167
Score = 25.4 bits (53), Expect = 1.8
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -1
Query: 363 ILLRYDIKSNDIPLYKVIDRSWCAHPD 283
IL +YD+ SND+ L K+ PD
Sbjct: 129 ILQKYDVHSNDLSLIKMYPACVAVPPD 155
>AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein
protein.
Length = 680
Score = 25.0 bits (52), Expect = 2.4
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 272 YRAAHFPYLSISVFPRDCHAILH 204
YR + PY SIS+ + H +LH
Sbjct: 355 YRCEYCPYASISMRHLESHLLLH 377
>AY928182-1|AAX22219.1| 335|Anopheles gambiae phenoloxidase
inhibitor protein protein.
Length = 335
Score = 25.0 bits (52), Expect = 2.4
Identities = 10/35 (28%), Positives = 16/35 (45%)
Frame = +1
Query: 508 ALLVLGHTRIPRFITTIKQYCVWQ*YSTIKCCQDF 612
++L HT +P+ I +YC+ K C F
Sbjct: 154 SILTTTHTSVPKMCAKIGEYCLTSSECCSKSCLSF 188
>AY578810-1|AAT07315.1| 897|Anopheles gambiae smurf protein.
Length = 897
Score = 25.0 bits (52), Expect = 2.4
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +3
Query: 228 RKHGNGKIRKMSSSVERGSRGE 293
++H NGK ++ VE G RG+
Sbjct: 304 QQHHNGKEQRTGKDVENGGRGD 325
>AY263176-1|AAP78791.1| 705|Anopheles gambiae TmcB-like protein
protein.
Length = 705
Score = 23.8 bits (49), Expect = 5.6
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -1
Query: 591 GRILLPDAILFYGSYETRN 535
G L D++++YGSY R+
Sbjct: 171 GEGYLSDSVMYYGSYSNRS 189
>DQ974162-1|ABJ52802.1| 418|Anopheles gambiae serpin 3 protein.
Length = 418
Score = 23.0 bits (47), Expect = 9.8
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -3
Query: 220 VTRSYTTHWQLPARTRPKTTDLHYST 143
V+R +T +LP +R +TT L ST
Sbjct: 329 VSRVFTDQAELPLISRGRTTPLKVST 354
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 721,967
Number of Sequences: 2352
Number of extensions: 13347
Number of successful extensions: 22
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75260343
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -