Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0146
         (639 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    22   3.8  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   3.8  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   5.0  
AF260823-1|AAG02021.1|  138|Tribolium castaneum alpha-esterase l...    21   6.6  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   8.7  

>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 372 LLKQLEFLQIHNTKWSSLHLCVW 440
           LLK L+ +Q HN      H C++
Sbjct: 96  LLKNLKMVQNHNNIREKSHYCLF 118


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 372 LLKQLEFLQIHNTKWSSLHLCVW 440
           LLK L+ +Q HN      H C++
Sbjct: 96  LLKNLKMVQNHNNIREKSHYCLF 118


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +2

Query: 98  LCCLALNVGGTRLATASTKG 157
           +C L L VGG  L  A   G
Sbjct: 6   ICALILTVGGRNLKNAEFNG 25


>AF260823-1|AAG02021.1|  138|Tribolium castaneum alpha-esterase like
           protein E4 protein.
          Length = 138

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 13/42 (30%), Positives = 17/42 (40%)
 Frame = +1

Query: 334 QSTLATVNFLPKYFSSNWSFCKFTIPNGPPCICAFGVDKSSI 459
           Q  L  + F     +  WS  +    +G PCI    V KS I
Sbjct: 8   QPPLGPLRFKAPQPAEPWSGIRDATQDGTPCISRHPVLKSLI 49


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 3/31 (9%)
 Frame = +1

Query: 271 CVTSDHGTVHVFSLEDEKLNK---QSTLATV 354
           CV SDHGT  + +     L     Q TL+++
Sbjct: 259 CVLSDHGTQFISNTWQNSLRAADIQPTLSSI 289


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,657
Number of Sequences: 336
Number of extensions: 3259
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)