Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0146
         (639 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    25   2.7  
AF533893-1|AAM97678.1|  570|Anopheles gambiae ascorbate transpor...    23   6.2  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          23   8.2  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            23   8.2  

>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = -1

Query: 639  TILLAQHSSIPYILKI*LMIFIEIFIY 559
            T+L A   S+P +  I L++F+ +FI+
Sbjct: 1740 TLLFALAMSLPALFNICLLLFLVMFIF 1766


>AF533893-1|AAM97678.1|  570|Anopheles gambiae ascorbate transporter
           protein.
          Length = 570

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -2

Query: 575 LKYLSIFRSLQKLIINISGAFPLSLNLYL**EPSAQTT 462
           L+Y+ +  S    I+ +S  FPL L L+L   P A  T
Sbjct: 435 LQYVDLRSSRNLYILGVSFFFPLVLCLWLQEHPGAIQT 472


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +1

Query: 406 IPNGPPCICAFGVDKSSIIVVC 471
           +PN PP    F V +  ++ VC
Sbjct: 256 LPNNPPWFVIFRVSEDDMLDVC 277


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 12/21 (57%), Positives = 14/21 (66%), Gaps = 2/21 (9%)
 Frame = +3

Query: 375 LKQLEFLQI--HNTKWSSLHL 431
           LKQL  L +  HNT WSS+ L
Sbjct: 120 LKQLVNLTLRTHNTDWSSISL 140


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 663,944
Number of Sequences: 2352
Number of extensions: 14042
Number of successful extensions: 21
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62723250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)