Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0146
(639 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL031633-25|CAI06057.1| 354|Caenorhabditis elegans Hypothetical... 69 2e-12
AL031633-2|CAD60426.1| 388|Caenorhabditis elegans Hypothetical ... 69 2e-12
AL031633-1|CAA21019.3| 386|Caenorhabditis elegans Hypothetical ... 69 2e-12
AF016448-16|AAM45377.1| 394|Caenorhabditis elegans Atg (autopha... 56 3e-08
AF016448-15|AAB65961.1| 412|Caenorhabditis elegans Atg (autopha... 56 3e-08
Z73978-3|CAA98293.1| 501|Caenorhabditis elegans Hypothetical pr... 32 0.40
Z78544-3|CAB01760.1| 395|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical pr... 29 2.8
AL132904-13|CAC35846.4| 778|Caenorhabditis elegans Hypothetical... 29 2.8
AF067607-6|AAY86221.1| 461|Caenorhabditis elegans Hypothetical ... 28 4.9
U23176-7|AAC46713.4| 454|Caenorhabditis elegans Hypothetical pr... 28 6.5
AF039038-9|AAO12408.1| 559|Caenorhabditis elegans Hypothetical ... 28 6.5
AF039038-8|AAM81097.1| 874|Caenorhabditis elegans Hypothetical ... 28 6.5
AF039038-7|AAM81098.1| 942|Caenorhabditis elegans Hypothetical ... 28 6.5
AF016452-10|AAB66019.1| 620|Caenorhabditis elegans Gastrulation... 28 6.5
AC024753-2|AAF60457.2| 561|Caenorhabditis elegans Hypothetical ... 28 6.5
Z68337-5|CAA92743.1| 230|Caenorhabditis elegans Hypothetical pr... 27 8.6
>AL031633-25|CAI06057.1| 354|Caenorhabditis elegans Hypothetical
protein Y39A1A.1c protein.
Length = 354
Score = 69.3 bits (162), Expect = 2e-12
Identities = 41/85 (48%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Frame = +2
Query: 5 KTGHVQLVELSS-HAGPSTAPESHLIAAHEAPLCCLALNVGGTRLATASTKGTLIRVFDT 181
KTG VQ++ L++ A S +P +I AH + +ALN GT +AT STKGT+IRVFD
Sbjct: 160 KTGSVQIMHLNALTARESKSPI--VIEAHLTDIAQVALNCQGTLVATGSTKGTVIRVFDA 217
Query: 182 STGQKLAELRRGAHQATIYCINFNP 256
T L ELRRG QA + C+ F+P
Sbjct: 218 RTKGPLYELRRGTVQAHLQCMAFSP 242
Score = 41.1 bits (92), Expect = 7e-04
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Frame = +1
Query: 247 F*PTSTNLCVTSDHGTVHVFSLEDEKLNKQSTLATVNFLPKYFSSNWSFCKFTIPNGPPC 426
F P S+ L V SD GT+H+F + D + K+ N L + S+ S K + + P
Sbjct: 240 FSPCSSYLAVASDKGTLHMFGIRDAEPQKKK-----NVLERSRGSS-SIVKIQL-DRPVM 292
Query: 427 ICAFG----VDKSSIIVVCADGSYYKYKF 501
FG + SII +CAD +Y++++F
Sbjct: 293 AIGFGKKTPKNLQSIIAICADATYWRHEF 321
>AL031633-2|CAD60426.1| 388|Caenorhabditis elegans Hypothetical
protein Y39A1A.1b protein.
Length = 388
Score = 69.3 bits (162), Expect = 2e-12
Identities = 41/85 (48%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Frame = +2
Query: 5 KTGHVQLVELSS-HAGPSTAPESHLIAAHEAPLCCLALNVGGTRLATASTKGTLIRVFDT 181
KTG VQ++ L++ A S +P +I AH + +ALN GT +AT STKGT+IRVFD
Sbjct: 192 KTGSVQIMHLNALTARESKSPI--VIEAHLTDIAQVALNCQGTLVATGSTKGTVIRVFDA 249
Query: 182 STGQKLAELRRGAHQATIYCINFNP 256
T L ELRRG QA + C+ F+P
Sbjct: 250 RTKGPLYELRRGTVQAHLQCMAFSP 274
Score = 39.5 bits (88), Expect = 0.002
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Frame = +1
Query: 247 F*PTSTNLCVTSDHGTVHVFSLEDEKLNKQSTLATVNFLPKYFSSNWSFCKFTIPNGPPC 426
F P S+ L V SD GT+H+F + D + K+ N L + S+ S K + + P
Sbjct: 272 FSPCSSYLAVASDKGTLHMFGIRDAEPQKKK-----NVLERSRGSS-SIVKIQL-DRPVM 324
Query: 427 ICAFG------VDKSSIIVVCADGSYYKYKF 501
FG + SII +CAD +Y++++F
Sbjct: 325 AIGFGKIPETPKNLQSIIAICADATYWRHEF 355
>AL031633-1|CAA21019.3| 386|Caenorhabditis elegans Hypothetical
protein Y39A1A.1a protein.
Length = 386
Score = 69.3 bits (162), Expect = 2e-12
Identities = 41/85 (48%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Frame = +2
Query: 5 KTGHVQLVELSS-HAGPSTAPESHLIAAHEAPLCCLALNVGGTRLATASTKGTLIRVFDT 181
KTG VQ++ L++ A S +P +I AH + +ALN GT +AT STKGT+IRVFD
Sbjct: 192 KTGSVQIMHLNALTARESKSPI--VIEAHLTDIAQVALNCQGTLVATGSTKGTVIRVFDA 249
Query: 182 STGQKLAELRRGAHQATIYCINFNP 256
T L ELRRG QA + C+ F+P
Sbjct: 250 RTKGPLYELRRGTVQAHLQCMAFSP 274
Score = 41.1 bits (92), Expect = 7e-04
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Frame = +1
Query: 247 F*PTSTNLCVTSDHGTVHVFSLEDEKLNKQSTLATVNFLPKYFSSNWSFCKFTIPNGPPC 426
F P S+ L V SD GT+H+F + D + K+ N L + S+ S K + + P
Sbjct: 272 FSPCSSYLAVASDKGTLHMFGIRDAEPQKKK-----NVLERSRGSS-SIVKIQL-DRPVM 324
Query: 427 ICAFG----VDKSSIIVVCADGSYYKYKF 501
FG + SII +CAD +Y++++F
Sbjct: 325 AIGFGKKTPKNLQSIIAICADATYWRHEF 353
>AF016448-16|AAM45377.1| 394|Caenorhabditis elegans Atg (autophagy)
related protein18, isoform b protein.
Length = 394
Score = 55.6 bits (128), Expect = 3e-08
Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Frame = +2
Query: 83 AHEAPLCCLALNVGGTRLATASTKGTLIRVFDTSTGQKLAELRRGAHQ-ATIYCINFN 253
AHE + CL N G +ATASTKGT+IRV+ G +L E RRG + IY + F+
Sbjct: 186 AHEGTIACLKFNQEGNMIATASTKGTVIRVYSVPNGHRLFEFRRGVTRCVNIYSLCFS 243
>AF016448-15|AAB65961.1| 412|Caenorhabditis elegans Atg (autophagy)
related protein18, isoform a protein.
Length = 412
Score = 55.6 bits (128), Expect = 3e-08
Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Frame = +2
Query: 83 AHEAPLCCLALNVGGTRLATASTKGTLIRVFDTSTGQKLAELRRGAHQ-ATIYCINFN 253
AHE + CL N G +ATASTKGT+IRV+ G +L E RRG + IY + F+
Sbjct: 186 AHEGTIACLKFNQEGNMIATASTKGTVIRVYSVPNGHRLFEFRRGVTRCVNIYSLCFS 243
>Z73978-3|CAA98293.1| 501|Caenorhabditis elegans Hypothetical
protein ZC302.2a protein.
Length = 501
Score = 31.9 bits (69), Expect = 0.40
Identities = 17/61 (27%), Positives = 33/61 (54%)
Frame = +2
Query: 77 IAAHEAPLCCLALNVGGTRLATASTKGTLIRVFDTSTGQKLAELRRGAHQATIYCINFNP 256
+A+H+ + + + +A+AS T +++FD +G L +R H ++C +FNP
Sbjct: 251 LASHQLGINDFSWSSNSQFIASASDD-TTVKIFDVISGACLRTMR--GHTNYVFCCSFNP 307
Query: 257 Q 259
Q
Sbjct: 308 Q 308
>Z78544-3|CAB01760.1| 395|Caenorhabditis elegans Hypothetical
protein K04G11.4 protein.
Length = 395
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +2
Query: 128 TRLATASTKGTLIRVFDTSTGQKLAELRRGAHQATIYCINFNP 256
++L + + L++VFD S+G+ + L+ H ++C FNP
Sbjct: 160 SKLIVSCSDDKLVKVFDVSSGRCVKTLK--GHTNYVFCCCFNP 200
>Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical
protein C14B1.4 protein.
Length = 376
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/49 (24%), Positives = 25/49 (51%)
Frame = +2
Query: 128 TRLATASTKGTLIRVFDTSTGQKLAELRRGAHQATIYCINFNPQVQIFV 274
+R +++ +++F+ T + L+ H ++C NFNPQ + V
Sbjct: 141 SRCVVSASDDKTLKIFEIVTSRMTKTLK--GHNNYVFCCNFNPQSSLVV 187
>AL132904-13|CAC35846.4| 778|Caenorhabditis elegans Hypothetical
protein Y111B2A.17 protein.
Length = 778
Score = 29.1 bits (62), Expect = 2.8
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Frame = +2
Query: 62 PESHLIAAHEAPLCCLALNVGGTRLATA----STKGTLIRVFDTSTGQKLAELRRGAHQA 229
PE H + H + + N G LATA + +++ ++ TS K +E+ HQ
Sbjct: 552 PEQHKLYGHGYEVYAVTANPTGNVLATACKSSHVEHSVVMLWSTSNWSKKSEII--GHQL 609
Query: 230 TIYCINFNP 256
T+ I +NP
Sbjct: 610 TVTQIAWNP 618
>AF067607-6|AAY86221.1| 461|Caenorhabditis elegans Hypothetical
protein C18H7.11 protein.
Length = 461
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = -3
Query: 637 NLTXTAFINPLYSQDIINDFY*NI 566
N T T F+NP++SQ+ +N F+ NI
Sbjct: 196 NNTHTFFMNPVFSQNGLNVFFPNI 219
>U23176-7|AAC46713.4| 454|Caenorhabditis elegans Hypothetical
protein F21H12.1 protein.
Length = 454
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 80 AAHEAPLCCLALNVGGTRLATASTKGTLIRVFDTSTGQKLAELR 211
+AH P+ CL+ + G +L T+S + I +FD G L +R
Sbjct: 64 SAHCLPVSCLSWSRDGRKLLTSSADNS-IAMFDVLAGTLLHRIR 106
>AF039038-9|AAO12408.1| 559|Caenorhabditis elegans Hypothetical
protein K06A5.8d protein.
Length = 559
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +2
Query: 149 TKGTLIR--VFDTSTGQKLAELRRGAHQATIYCINFNP 256
TK T R ++ + ++A R H+ ++YC++FNP
Sbjct: 387 TKRTQSRPMAYEQTKNAEIAVTRPKQHRGSVYCLSFNP 424
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +2
Query: 86 HEAPLCCLALNVGGTRLATASTKGTL-IRVFDTSTGQKLAELRRGAHQATI 235
H + CL+ N G LAT S T+ + F+ + + AE+ H T+
Sbjct: 413 HRGSVYCLSFNPNGDLLATGSNDKTIRLMAFNEDSCRIGAEMELTCHDGTV 463
>AF039038-8|AAM81097.1| 874|Caenorhabditis elegans Hypothetical
protein K06A5.8a protein.
Length = 874
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +2
Query: 149 TKGTLIR--VFDTSTGQKLAELRRGAHQATIYCINFNP 256
TK T R ++ + ++A R H+ ++YC++FNP
Sbjct: 653 TKRTQSRPMAYEQTKNAEIAVTRPKQHRGSVYCLSFNP 690
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +2
Query: 86 HEAPLCCLALNVGGTRLATASTKGTL-IRVFDTSTGQKLAELRRGAHQATI 235
H + CL+ N G LAT S T+ + F+ + + AE+ H T+
Sbjct: 679 HRGSVYCLSFNPNGDLLATGSNDKTIRLMAFNEDSCRIGAEMELTCHDGTV 729
>AF039038-7|AAM81098.1| 942|Caenorhabditis elegans Hypothetical
protein K06A5.8b protein.
Length = 942
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +2
Query: 149 TKGTLIR--VFDTSTGQKLAELRRGAHQATIYCINFNP 256
TK T R ++ + ++A R H+ ++YC++FNP
Sbjct: 653 TKRTQSRPMAYEQTKNAEIAVTRPKQHRGSVYCLSFNP 690
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +2
Query: 86 HEAPLCCLALNVGGTRLATASTKGTL-IRVFDTSTGQKLAELRRGAHQATI 235
H + CL+ N G LAT S T+ + F+ + + AE+ H T+
Sbjct: 679 HRGSVYCLSFNPNGDLLATGSNDKTIRLMAFNEDSCRIGAEMELTCHDGTV 729
>AF016452-10|AAB66019.1| 620|Caenorhabditis elegans Gastrulation
defective protein 1 protein.
Length = 620
Score = 27.9 bits (59), Expect = 6.5
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 11/75 (14%)
Frame = +2
Query: 65 ESHLIAAHEAPLCCLALNVGGTRLATASTKGTLIRVFDTSTGQKLAELRRG--------- 217
+ L+ A + LA + G L AS + +IR+ D + G++ +E RG
Sbjct: 162 DKELLPAESHVINSLAFSPNGETLVVASGEA-IIRLLDRA-GKQWSETVRGDQYIIDLNI 219
Query: 218 --AHQATIYCINFNP 256
H AT+ C+ FNP
Sbjct: 220 TKGHTATVNCVEFNP 234
>AC024753-2|AAF60457.2| 561|Caenorhabditis elegans Hypothetical
protein Y23H5B.5 protein.
Length = 561
Score = 27.9 bits (59), Expect = 6.5
Identities = 16/49 (32%), Positives = 30/49 (61%)
Frame = +2
Query: 89 EAPLCCLALNVGGTRLATASTKGTLIRVFDTSTGQKLAELRRGAHQATI 235
E P+ + G +ATA+ G +++++DT+TG++L L+ AH T+
Sbjct: 219 EHPVESVLFLPGEQLIATAA--GPIVKIWDTTTGRQLTALQ--AHYKTV 263
>Z68337-5|CAA92743.1| 230|Caenorhabditis elegans Hypothetical
protein M7.8 protein.
Length = 230
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = -3
Query: 325 VSHLLN*IHEQFHDLRSHKDLYLWVKINAV 236
V+ +LN +HE F LR +D+ L +I++V
Sbjct: 115 VAEILNELHESFWSLRPDQDVVLHFEISSV 144
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,322,077
Number of Sequences: 27780
Number of extensions: 296975
Number of successful extensions: 713
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 707
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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