Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0146
         (639 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    23   1.9  
AB201717-1|BAD90662.1|  107|Apis mellifera apime-corazonin prepr...    22   4.4  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    22   5.8  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 14/51 (27%), Positives = 22/51 (43%)
 Frame = +1

Query: 370 YFSSNWSFCKFTIPNGPPCICAFGVDKSSIIVVCADGSYYKYKFNERGNAP 522
           Y +S + F K     GP  +  FG  K  I+V  +   + K  + +  N P
Sbjct: 21  YLTSTFDFWKSRGVVGPKPVPFFGTTKDLILVKKSTAHFVKDIYEKYKNEP 71


>AB201717-1|BAD90662.1|  107|Apis mellifera apime-corazonin
           preprohormone protein.
          Length = 107

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +3

Query: 183 QQDRNWLNCEEELIRQLYTALILTHKYKSLCDL 281
           Q D  + NCE + +R L    I    +++ C+L
Sbjct: 49  QSDNVFANCELQKLRLLLQGNINNQLFQTPCEL 81


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +1

Query: 295 VHVFSLEDEKL 327
           +HVFSL D KL
Sbjct: 152 IHVFSLHDNKL 162


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,176
Number of Sequences: 438
Number of extensions: 3364
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19193721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)