Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0145
         (598 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132863-10|CAN99717.1|  181|Caenorhabditis elegans Hypothetical...    29   2.5  
U41010-2|AAF98588.1|  585|Caenorhabditis elegans Trehalase prote...    27   7.7  
AJ512334-1|CAD54508.2|  585|Caenorhabditis elegans trehalase pro...    27   7.7  

>AL132863-10|CAN99717.1|  181|Caenorhabditis elegans Hypothetical
           protein Y37H2A.14 protein.
          Length = 181

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 14/66 (21%), Positives = 32/66 (48%)
 Frame = +2

Query: 311 SRRLQSNLRRRPCVRSIEHDHH*RQVGPRDPSVPADAVRTSHQRPRSVPLLRSSAAGQSF 490
           ++R  +N ++R   R++E +H     G     +PA   +   + P+ +PL++ S   Q  
Sbjct: 42  AKRANNNRKKRDSQRTVEKEHI--SHGIVSTEIPAADPKAHDESPKQMPLVKKSKKSQKK 99

Query: 491 RRRRVL 508
             + ++
Sbjct: 100 TNKEIV 105


>U41010-2|AAF98588.1|  585|Caenorhabditis elegans Trehalase protein
           2 protein.
          Length = 585

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +1

Query: 427 DLTSAPALGTAPQEFCCWSELQAAASTGR 513
           DL SA  L T  ++   W +L AAA +GR
Sbjct: 263 DLESAEHLDTLEKKCVLWGDLAAAAESGR 291


>AJ512334-1|CAD54508.2|  585|Caenorhabditis elegans trehalase
           protein.
          Length = 585

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +1

Query: 427 DLTSAPALGTAPQEFCCWSELQAAASTGR 513
           DL SA  L T  ++   W +L AAA +GR
Sbjct: 263 DLESAEHLDTLEKKCVLWGDLAAAAESGR 291


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,155,885
Number of Sequences: 27780
Number of extensions: 265832
Number of successful extensions: 728
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 728
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)