Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0143
(696 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46013| Best HMM Match : DUF1129 (HMM E-Value=0.23) 30 1.6
SB_40906| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_17622| Best HMM Match : zf-CCHC (HMM E-Value=0.3) 29 3.6
SB_377| Best HMM Match : IQ (HMM E-Value=0.0002) 29 4.8
SB_29028| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_59327| Best HMM Match : DUF919 (HMM E-Value=6.3) 28 6.3
SB_35264| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_20424| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_30230| Best HMM Match : CH (HMM E-Value=0.0035) 28 8.3
SB_43441| Best HMM Match : Lipase (HMM E-Value=8.19998e-41) 28 8.3
SB_9200| Best HMM Match : Peptidase_A17 (HMM E-Value=4.4e-39) 28 8.3
SB_3143| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
>SB_46013| Best HMM Match : DUF1129 (HMM E-Value=0.23)
Length = 553
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/65 (24%), Positives = 29/65 (44%)
Frame = +1
Query: 313 ALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKVAFTNDNGNLYQSKESRS 492
++N+ + +N I + NS + D D SI D + NDN ++Y + S
Sbjct: 290 SINDNDNSINDNDNSIYDNDNSINDNDNSINDNDNSINDNDNSIYDNDNSSIYDNDNSIY 349
Query: 493 ENSGT 507
+N +
Sbjct: 350 DNDNS 354
>SB_40906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 154
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +1
Query: 316 LNERKSQDKHTENLIPNLT-NSHKSYGYTGIDKDESIVSQDKVAFTNDNGNLYQSKES 486
++E + +D+ T N P L N KSY I E ++ ++ + + G+L KES
Sbjct: 41 VDENEPKDEETANQTPTLKDNDEKSYYKVDIPSSEQRITVEERSDDSTRGHLGSPKES 98
>SB_17622| Best HMM Match : zf-CCHC (HMM E-Value=0.3)
Length = 374
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/83 (22%), Positives = 34/83 (40%)
Frame = +1
Query: 214 PNHRKTKP*STS*PRNVENPSQRPEHRDPQDYTALNERKSQDKHTENLIPNLTNSHKSYG 393
P TK ST P Q H T ++++ KHTE + N+ S+
Sbjct: 64 PQLTPTKHSSTPTPIQTHRKPQERIHNVLLTKTEAQKKEALVKHTEKKVCPYHNNAASHN 123
Query: 394 YTGIDKDESIVSQDKVAFTNDNG 462
T + + ++ ++++ F NG
Sbjct: 124 LTECKRFKELLYEERLEFLKSNG 146
>SB_377| Best HMM Match : IQ (HMM E-Value=0.0002)
Length = 1376
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/66 (27%), Positives = 30/66 (45%)
Frame = +1
Query: 304 DYTALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKVAFTNDNGNLYQSKE 483
D L+ + SQ + + N H S+ G+D E++ S+D+ + T KE
Sbjct: 715 DNCELSSKSSQPESEQVRESKTHNEHVSHAPDGLDTQETVGSKDEDSITERKKT--DQKE 772
Query: 484 SRSENS 501
SE+S
Sbjct: 773 GNSESS 778
>SB_29028| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 714
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +3
Query: 483 ISFRKLR-NLTQDTVPKIIYVQTDGLQDNQLYQVAGSSGDSIIMS 614
+ RKL NL+ PK++ QTD +D + + SG ++ S
Sbjct: 216 LPLRKLSSNLSMHDDPKVMKNQTDSFEDTTISLIGSKSGTTLFQS 260
>SB_59327| Best HMM Match : DUF919 (HMM E-Value=6.3)
Length = 293
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +3
Query: 483 ISFRKLR-NLTQDTVPKIIYVQTDGLQDNQLYQVAGSSGDSIIMS 614
+ RKL NL+ PK++ QTD +D + + SG ++ S
Sbjct: 97 LPLRKLSSNLSMHDDPKVMKNQTDSFEDTTISLIGSKSGTTLFQS 141
>SB_35264| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 619
Score = 28.3 bits (60), Expect = 6.3
Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 3/72 (4%)
Frame = +1
Query: 196 HSRSWRPNHRKTKP*STS*PRNVENPSQRPEHRD--PQDYTALNERKS-QDKHTENLIPN 366
H R R H + S S N E PS R + RD P + L +S +D T N N
Sbjct: 80 HRRESRRVHVRNSRCSDSFRGNDEKPSARSDRRDRKPDNQRGLKRSRSRKDDTTANAKRN 139
Query: 367 LTNSHKSYGYTG 402
+ + + Y G
Sbjct: 140 RSQYQRLHSYRG 151
>SB_20424| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1711
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = +1
Query: 262 VENPSQRPEHRDPQDYTALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDK 438
+E + E +D T ER+ +D EN+ N+ NS S + ++ I +DK
Sbjct: 976 LERRKHQEELETLKDKTLKVERELRDSQQENIKMNIENSKLSRKVSSLESSVEIFEKDK 1034
>SB_30230| Best HMM Match : CH (HMM E-Value=0.0035)
Length = 2440
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +1
Query: 256 RNVENPSQRPEHRDP--QDYTALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDES 420
R+ P + H+DP + + +E + + +LT+ H+S TG+DK+E+
Sbjct: 203 RSSSIPERLSTHQDPGVDEGKSRSETELNSARKNSSEVHLTDLHRSQSLTGLDKNEA 259
>SB_43441| Best HMM Match : Lipase (HMM E-Value=8.19998e-41)
Length = 291
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/58 (22%), Positives = 25/58 (43%)
Frame = +1
Query: 253 PRNVENPSQRPEHRDPQDYTALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIV 426
PR++ P Y L++ + + +P+ T +GY G+D +SI+
Sbjct: 48 PRDIGTRLLLYTQASPDKYEVLSDADTATIEKSSFLPHRTTRFIVHGYAGLDSVDSII 105
>SB_9200| Best HMM Match : Peptidase_A17 (HMM E-Value=4.4e-39)
Length = 1607
Score = 27.9 bits (59), Expect = 8.3
Identities = 19/83 (22%), Positives = 33/83 (39%)
Frame = +1
Query: 214 PNHRKTKP*STS*PRNVENPSQRPEHRDPQDYTALNERKSQDKHTENLIPNLTNSHKSYG 393
P TK ST P Q H T ++++ KHTE + N+ S+
Sbjct: 535 PQLTPTKHSSTPTPIQTHRKPQERIHNVLLTKTEAQKKEALVKHTEKKVCPYHNNAASHN 594
Query: 394 YTGIDKDESIVSQDKVAFTNDNG 462
T + + + ++++ F NG
Sbjct: 595 LTECKRFKELPYEERLEFLKSNG 617
>SB_3143| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 322
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/52 (25%), Positives = 25/52 (48%)
Frame = +1
Query: 265 ENPSQRPEHRDPQDYTALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDES 420
E+ S H + ++E+K ++K ENL+ KSY + ++ +S
Sbjct: 170 EDNSLNNSHSENDSKNRVSEKKYEEKTGENLVTETYQEQKSYQNSDYERQKS 221
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,808,152
Number of Sequences: 59808
Number of extensions: 405656
Number of successful extensions: 1000
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 995
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1817559367
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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