Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0143
(696 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006607-1|AAY44022.1| 208|Caenorhabditis elegans Hypothetical ... 31 0.79
U00045-3|AAL02502.1| 868|Caenorhabditis elegans Temporarily ass... 29 2.4
U00045-2|AAL02501.1| 1004|Caenorhabditis elegans Temporarily ass... 29 2.4
U00045-1|AAM29684.1| 1099|Caenorhabditis elegans Temporarily ass... 29 2.4
AF026212-3|AAF99974.2| 1172|Caenorhabditis elegans Hypothetical ... 29 2.4
AF016439-4|AAV28339.1| 489|Caenorhabditis elegans Hypothetical ... 29 2.4
Z81017-11|CAC70095.2| 1158|Caenorhabditis elegans Hypothetical p... 29 3.2
Z81017-10|CAE47468.1| 1051|Caenorhabditis elegans Hypothetical p... 29 3.2
Z81017-9|CAD44136.1| 1096|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z81017-8|CAC70094.2| 988|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z81017-7|CAB02673.2| 1040|Caenorhabditis elegans Hypothetical pr... 29 3.2
U39761-1|AAC46934.1| 1040|Caenorhabditis elegans EGL-15 protein. 29 3.2
AY288941-1|AAP44084.1| 987|Caenorhabditis elegans EGL-15 protein. 29 3.2
U02289-1|AAA18934.1| 1439|Caenorhabditis elegans GTPase-activati... 29 4.2
L16687-1|AAK71357.2| 1317|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z48621-2|CAA88547.1| 536|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z78067-1|CAB01533.1| 1170|Caenorhabditis elegans Hypothetical pr... 28 7.3
AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical... 28 7.3
AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical... 28 7.3
>AC006607-1|AAY44022.1| 208|Caenorhabditis elegans Hypothetical
protein C09E7.10 protein.
Length = 208
Score = 31.1 bits (67), Expect = 0.79
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 4/64 (6%)
Frame = +1
Query: 259 NVENPSQRPEHR--DPQDYTALNERKSQDKHTENLI--PNLTNSHKSYGYTGIDKDESIV 426
NV ++P+ + DP + L E +D H +I + + H YG T DKD
Sbjct: 67 NVTLEKEKPKQKLIDPSTFITLKENDWRDAHEGRMIIWSHESQHHPDYGKTFTDKDRYTY 126
Query: 427 SQDK 438
Q K
Sbjct: 127 RQSK 130
>U00045-3|AAL02502.1| 868|Caenorhabditis elegans Temporarily
assigned gene nameprotein 204, isoform b protein.
Length = 868
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/57 (22%), Positives = 27/57 (47%)
Frame = +1
Query: 271 PSQRPEHRDPQDYTALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKV 441
P Q ++ + Y+A + K T N+I HK G++ + +DE ++ + +
Sbjct: 344 PKQNNGYQRQRRYSASSASKQDGMFTLNVIMGSQPVHKGMGFSTVKRDERVIVESVI 400
>U00045-2|AAL02501.1| 1004|Caenorhabditis elegans Temporarily
assigned gene nameprotein 204, isoform a protein.
Length = 1004
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/57 (22%), Positives = 27/57 (47%)
Frame = +1
Query: 271 PSQRPEHRDPQDYTALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKV 441
P Q ++ + Y+A + K T N+I HK G++ + +DE ++ + +
Sbjct: 299 PKQNNGYQRQRRYSASSASKQDGMFTLNVIMGSQPVHKGMGFSTVKRDERVIVESVI 355
>U00045-1|AAM29684.1| 1099|Caenorhabditis elegans Temporarily
assigned gene nameprotein 204, isoform c protein.
Length = 1099
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/57 (22%), Positives = 27/57 (47%)
Frame = +1
Query: 271 PSQRPEHRDPQDYTALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKV 441
P Q ++ + Y+A + K T N+I HK G++ + +DE ++ + +
Sbjct: 394 PKQNNGYQRQRRYSASSASKQDGMFTLNVIMGSQPVHKGMGFSTVKRDERVIVESVI 450
>AF026212-3|AAF99974.2| 1172|Caenorhabditis elegans Hypothetical
protein F52G3.1 protein.
Length = 1172
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/77 (22%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Frame = +1
Query: 262 VENPSQRPEHRDPQDYTALNERKSQD--KHTENLIPN-LTNSHKSYGYTGIDKDESIVSQ 432
++N +Q QD+ ++ K +D + T +P L G+ +S+ ++
Sbjct: 651 LQNHTQNQSQNQSQDHEKNSKTKPKDPKQGTRLFVPKALRKEADDLPANGLLSPQSVETK 710
Query: 433 DKVAFTNDNGNLYQSKE 483
+K+A NG++++S E
Sbjct: 711 EKIAAAKSNGDVFKSDE 727
>AF016439-4|AAV28339.1| 489|Caenorhabditis elegans Hypothetical
protein R02F11.3b protein.
Length = 489
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/40 (27%), Positives = 23/40 (57%)
Frame = +1
Query: 253 PRNVENPSQRPEHRDPQDYTALNERKSQDKHTENLIPNLT 372
PR+ NP ++P R + +++E+K + +T + N+T
Sbjct: 159 PRSPRNPRKKPMERTDTEEKSVDEKKDDESNTAARMANIT 198
>Z81017-11|CAC70095.2| 1158|Caenorhabditis elegans Hypothetical
protein F58A3.2c protein.
Length = 1158
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +1
Query: 271 PSQRPEHRDPQDYTA-LNERKSQDKHTENLIPNLTNSH 381
P + + Q+ T L RK+ DK LIPNLT H
Sbjct: 736 PKEEKAKKSSQELTDYLEPRKASDKDDIELIPNLTQRH 773
>Z81017-10|CAE47468.1| 1051|Caenorhabditis elegans Hypothetical
protein F58A3.2e protein.
Length = 1051
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +1
Query: 271 PSQRPEHRDPQDYTA-LNERKSQDKHTENLIPNLTNSH 381
P + + Q+ T L RK+ DK LIPNLT H
Sbjct: 736 PKEEKAKKSSQELTDYLEPRKASDKDDIELIPNLTQRH 773
>Z81017-9|CAD44136.1| 1096|Caenorhabditis elegans Hypothetical
protein F58A3.2d protein.
Length = 1096
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +1
Query: 271 PSQRPEHRDPQDYTA-LNERKSQDKHTENLIPNLTNSH 381
P + + Q+ T L RK+ DK LIPNLT H
Sbjct: 736 PKEEKAKKSSQELTDYLEPRKASDKDDIELIPNLTQRH 773
>Z81017-8|CAC70094.2| 988|Caenorhabditis elegans Hypothetical
protein F58A3.2b protein.
Length = 988
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +1
Query: 271 PSQRPEHRDPQDYTA-LNERKSQDKHTENLIPNLTNSH 381
P + + Q+ T L RK+ DK LIPNLT H
Sbjct: 684 PKEEKAKKSSQELTDYLEPRKASDKDDIELIPNLTQRH 721
>Z81017-7|CAB02673.2| 1040|Caenorhabditis elegans Hypothetical
protein F58A3.2a protein.
Length = 1040
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +1
Query: 271 PSQRPEHRDPQDYTA-LNERKSQDKHTENLIPNLTNSH 381
P + + Q+ T L RK+ DK LIPNLT H
Sbjct: 736 PKEEKAKKSSQELTDYLEPRKASDKDDIELIPNLTQRH 773
>U39761-1|AAC46934.1| 1040|Caenorhabditis elegans EGL-15 protein.
Length = 1040
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +1
Query: 271 PSQRPEHRDPQDYTA-LNERKSQDKHTENLIPNLTNSH 381
P + + Q+ T L RK+ DK LIPNLT H
Sbjct: 736 PKEEKAKKSSQELTDYLEPRKASDKDDIELIPNLTQRH 773
>AY288941-1|AAP44084.1| 987|Caenorhabditis elegans EGL-15 protein.
Length = 987
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +1
Query: 271 PSQRPEHRDPQDYTA-LNERKSQDKHTENLIPNLTNSH 381
P + + Q+ T L RK+ DK LIPNLT H
Sbjct: 683 PKEEKAKKSSQELTDYLEPRKASDKDDIELIPNLTQRH 720
>U02289-1|AAA18934.1| 1439|Caenorhabditis elegans GTPase-activating
protein protein.
Length = 1439
Score = 28.7 bits (61), Expect = 4.2
Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 4/84 (4%)
Frame = +1
Query: 265 ENPSQRPEHRDPQDYTALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKVA 444
E+PS+ H DP++ ++E + + + N +L N S G+D ++ + +V
Sbjct: 159 EDPSEDTGHDDPEETQEISE--TPIRRSRNRNASLRNRQSSRSLGGLDFEKLRMGTARVG 216
Query: 445 FTN----DNGNLYQSKESRSENSG 504
+N +NG S S + G
Sbjct: 217 DSNEATAENGTSSSSSRKNSRDDG 240
>L16687-1|AAK71357.2| 1317|Caenorhabditis elegans Hypothetical
protein C04D8.1 protein.
Length = 1317
Score = 28.7 bits (61), Expect = 4.2
Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 4/84 (4%)
Frame = +1
Query: 265 ENPSQRPEHRDPQDYTALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKVA 444
E+PS+ H DP++ ++E + + + N +L N S G+D ++ + +V
Sbjct: 37 EDPSEDTGHDDPEETQEISE--TPIRRSRNRNASLRNRQSSRSLGGLDFEKLRMGTARVG 94
Query: 445 FTN----DNGNLYQSKESRSENSG 504
+N +NG S S + G
Sbjct: 95 DSNEATAENGTSSSSSRKNSRDDG 118
>Z48621-2|CAA88547.1| 536|Caenorhabditis elegans Hypothetical
protein R07B1.3 protein.
Length = 536
Score = 28.3 bits (60), Expect = 5.5
Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +1
Query: 253 PRNVENPSQRPEHRDPQDYTAL-NERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVS 429
P V+ +PE + Y L +E+K + + + ++K Y Y+ +D D
Sbjct: 77 PDEVKYLGAKPELIEVGGYAFLESEQKKYYEFSSDKTKMFYQNYKQYHYSEVDNDAGYNY 136
Query: 430 QDKVAFTN 453
DK+ F N
Sbjct: 137 NDKIMFPN 144
>Z78067-1|CAB01533.1| 1170|Caenorhabditis elegans Hypothetical
protein ZC412.2 protein.
Length = 1170
Score = 27.9 bits (59), Expect = 7.3
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +3
Query: 462 EFISK*RISFRKLRNLTQDTVPKIIYVQTDGLQDNQLYQVA--GSSGDSIIMSRAQTNKG 635
+F ++ + FR++RN D + K I + DG Q L++ GS D I S Q +
Sbjct: 636 QFDAEQKAEFRQMRNFDNDNLNKFIGLCLDGPQLFSLWRFCSRGSLSDVISKSSMQMDSF 695
Query: 636 PLYYIVK 656
++ +++
Sbjct: 696 FMFSLIR 702
>AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical
protein Y105E8A.24b protein.
Length = 1127
Score = 27.9 bits (59), Expect = 7.3
Identities = 19/86 (22%), Positives = 41/86 (47%)
Frame = +1
Query: 277 QRPEHRDPQDYTALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKVAFTND 456
Q+ HR T+ + D +T ++P T+S TG+ ++ ++ + + +N
Sbjct: 18 QQQRHRRQSSGTSGGGASNLDANTLKVLPTTTSSQSICCDTGVAEN---LNLNLNSISNH 74
Query: 457 NGNLYQSKESRSENSGT*HRILCPKL 534
N ++ +SK + S + T R+ P +
Sbjct: 75 NSSIPKSKSNNSVSGITSRRVSFPNI 100
>AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical
protein Y105E8A.24a protein.
Length = 1161
Score = 27.9 bits (59), Expect = 7.3
Identities = 19/86 (22%), Positives = 41/86 (47%)
Frame = +1
Query: 277 QRPEHRDPQDYTALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKVAFTND 456
Q+ HR T+ + D +T ++P T+S TG+ ++ ++ + + +N
Sbjct: 18 QQQRHRRQSSGTSGGGASNLDANTLKVLPTTTSSQSICCDTGVAEN---LNLNLNSISNH 74
Query: 457 NGNLYQSKESRSENSGT*HRILCPKL 534
N ++ +SK + S + T R+ P +
Sbjct: 75 NSSIPKSKSNNSVSGITSRRVSFPNI 100
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,934,098
Number of Sequences: 27780
Number of extensions: 307864
Number of successful extensions: 798
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 779
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 797
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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