Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0142
(741 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z95123-2|CAB08356.1| 339|Caenorhabditis elegans Hypothetical pr... 109 2e-24
AF260244-1|AAF97550.1| 339|Caenorhabditis elegans stearoyl-CoA ... 109 2e-24
AF260243-1|AAF97549.1| 338|Caenorhabditis elegans stearoyl-CoA ... 107 6e-24
AF022972-8|AAC48239.1| 338|Caenorhabditis elegans Fatty acid de... 107 6e-24
Z82073-6|CAB04924.1| 333|Caenorhabditis elegans Hypothetical pr... 95 6e-20
AF260242-1|AAF97548.1| 333|Caenorhabditis elegans palmitoyl-CoA... 95 6e-20
Z34802-8|CAH10787.1| 704|Caenorhabditis elegans Hypothetical pr... 32 0.49
Z34802-7|CAA84338.2| 828|Caenorhabditis elegans Hypothetical pr... 32 0.49
AL117204-38|CAL49444.1| 982|Caenorhabditis elegans Hypothetical... 30 1.5
AL117204-31|CAB55122.2| 727|Caenorhabditis elegans Hypothetical... 30 1.5
U80952-2|AAB38094.1| 309|Caenorhabditis elegans Muscle attachme... 29 3.5
U80952-1|AAU20846.1| 315|Caenorhabditis elegans Muscle attachme... 29 3.5
Z98877-12|CAB63409.1| 528|Caenorhabditis elegans Hypothetical p... 29 4.6
Z70718-6|CAA94677.1| 1029|Caenorhabditis elegans Hypothetical pr... 28 6.0
AF026211-8|AAB71291.2| 234|Caenorhabditis elegans Hypothetical ... 28 8.0
AF000264-2|AAC71121.1| 761|Caenorhabditis elegans Half transpor... 28 8.0
>Z95123-2|CAB08356.1| 339|Caenorhabditis elegans Hypothetical
protein VZK822L.1 protein.
Length = 339
Score = 109 bits (262), Expect = 2e-24
Identities = 59/153 (38%), Positives = 84/153 (54%), Gaps = 3/153 (1%)
Frame = +2
Query: 290 LFKAMWRTSIFAIFLYLCSGLGITAGAHRLWAHKSYKARLPLRILLTIFNTIAFQDAVVD 469
+F+A W+T IF LY+ G GITAGAHRLW+HKSYKA P+RI L I N IA Q+ V++
Sbjct: 70 IFEAKWQTVIFTFLLYVFGGFGITAGAHRLWSHKSYKATTPMRIFLMILNNIALQNDVIE 129
Query: 470 WARDHRMHHKYSEPMRTPTTQPEDSSFPTLAGCC*GSIPKSKPKA--IPST*MICAMILS 643
WARDHR HHK+++ P F + P+ K + + + ++ +L
Sbjct: 130 WARDHRCHHKWTDTDADPHNTTRGFFFAHMGWLLVRKHPQVKEQGAKLDMSDLLSDPVL- 188
Query: 644 YVFRRSTTKF*CL*PVFIMPTYVPT-LWGRNSF 739
VF+R + FI+PT +P W +F
Sbjct: 189 -VFQRKHYFPLVILCCFILPTIIPVYFWKETAF 220
>AF260244-1|AAF97550.1| 339|Caenorhabditis elegans stearoyl-CoA
desaturase FAT-6 protein.
Length = 339
Score = 109 bits (262), Expect = 2e-24
Identities = 59/153 (38%), Positives = 84/153 (54%), Gaps = 3/153 (1%)
Frame = +2
Query: 290 LFKAMWRTSIFAIFLYLCSGLGITAGAHRLWAHKSYKARLPLRILLTIFNTIAFQDAVVD 469
+F+A W+T IF LY+ G GITAGAHRLW+HKSYKA P+RI L I N IA Q+ V++
Sbjct: 70 IFEAKWQTVIFTFLLYVFGGFGITAGAHRLWSHKSYKATTPMRIFLMILNNIALQNDVIE 129
Query: 470 WARDHRMHHKYSEPMRTPTTQPEDSSFPTLAGCC*GSIPKSKPKA--IPST*MICAMILS 643
WARDHR HHK+++ P F + P+ K + + + ++ +L
Sbjct: 130 WARDHRCHHKWTDTDADPHNTTRGFFFAHMGWLLVRKHPQVKEQGAKLDMSDLLSDPVL- 188
Query: 644 YVFRRSTTKF*CL*PVFIMPTYVPT-LWGRNSF 739
VF+R + FI+PT +P W +F
Sbjct: 189 -VFQRKHYFPLVILCCFILPTIIPVYFWKETAF 220
>AF260243-1|AAF97549.1| 338|Caenorhabditis elegans stearoyl-CoA
desaturase FAT-7 protein.
Length = 338
Score = 107 bits (258), Expect = 6e-24
Identities = 43/78 (55%), Positives = 59/78 (75%)
Frame = +2
Query: 290 LFKAMWRTSIFAIFLYLCSGLGITAGAHRLWAHKSYKARLPLRILLTIFNTIAFQDAVVD 469
+F A W+T++F+ LY+ SG GITAGAHRLW+HKSYKA P+RI L + N IA Q+ +++
Sbjct: 69 VFHAKWQTAVFSFALYVFSGFGITAGAHRLWSHKSYKATTPMRIFLMLLNNIALQNDIIE 128
Query: 470 WARDHRMHHKYSEPMRTP 523
WARDHR HHK+++ P
Sbjct: 129 WARDHRCHHKWTDTDADP 146
Score = 91.5 bits (217), Expect = 6e-19
Identities = 37/61 (60%), Positives = 50/61 (81%)
Frame = +1
Query: 511 DADPHNATRGFFFSHIGWLLLRKHPEIKAKGHTVDVNDLRNDPILRFQKKYYQILMPLAC 690
DADPHN TRGFFF+H+GWLL+RKHP++K G +D++DL +DP+L FQ+K+Y L+ L C
Sbjct: 143 DADPHNTTRGFFFTHMGWLLVRKHPQVKEHGGKLDLSDLFSDPVLVFQRKHYFPLVILFC 202
Query: 691 F 693
F
Sbjct: 203 F 203
>AF022972-8|AAC48239.1| 338|Caenorhabditis elegans Fatty acid
desaturase protein 7 protein.
Length = 338
Score = 107 bits (258), Expect = 6e-24
Identities = 43/78 (55%), Positives = 59/78 (75%)
Frame = +2
Query: 290 LFKAMWRTSIFAIFLYLCSGLGITAGAHRLWAHKSYKARLPLRILLTIFNTIAFQDAVVD 469
+F A W+T++F+ LY+ SG GITAGAHRLW+HKSYKA P+RI L + N IA Q+ +++
Sbjct: 69 VFHAKWQTAVFSFALYVFSGFGITAGAHRLWSHKSYKATTPMRIFLMLLNNIALQNDIIE 128
Query: 470 WARDHRMHHKYSEPMRTP 523
WARDHR HHK+++ P
Sbjct: 129 WARDHRCHHKWTDTDADP 146
Score = 91.5 bits (217), Expect = 6e-19
Identities = 37/61 (60%), Positives = 50/61 (81%)
Frame = +1
Query: 511 DADPHNATRGFFFSHIGWLLLRKHPEIKAKGHTVDVNDLRNDPILRFQKKYYQILMPLAC 690
DADPHN TRGFFF+H+GWLL+RKHP++K G +D++DL +DP+L FQ+K+Y L+ L C
Sbjct: 143 DADPHNTTRGFFFTHMGWLLVRKHPQVKEHGGKLDLSDLFSDPVLVFQRKHYFPLVILFC 202
Query: 691 F 693
F
Sbjct: 203 F 203
>Z82073-6|CAB04924.1| 333|Caenorhabditis elegans Hypothetical
protein W06D12.3 protein.
Length = 333
Score = 94.7 bits (225), Expect = 6e-20
Identities = 37/78 (47%), Positives = 54/78 (69%)
Frame = +2
Query: 290 LFKAMWRTSIFAIFLYLCSGLGITAGAHRLWAHKSYKARLPLRILLTIFNTIAFQDAVVD 469
+F+A W T + L+ +G+T GAHRLWAH++YKA L R+ L + N+IAFQ+ ++D
Sbjct: 61 VFQAKWATVGWVFLLHTLGSMGVTGGAHRLWAHRAYKATLSWRVFLMLINSIAFQNDIID 120
Query: 470 WARDHRMHHKYSEPMRTP 523
WARDHR HHK+++ P
Sbjct: 121 WARDHRCHHKWTDTDADP 138
Score = 80.6 bits (190), Expect = 1e-15
Identities = 35/77 (45%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Frame = +1
Query: 511 DADPHNATRGFFFSHIGWLLLRKHPEIKAKGHTVDVNDLRNDPILRFQKKYYQILMPLAC 690
DADPH+ RG FF+H+GWLL++KH ++K +G +D++DL DP+L FQ+K Y L+ + C
Sbjct: 135 DADPHSTNRGMFFAHMGWLLVKKHDQLKIQGGKLDLSDLYEDPVLMFQRKNYLPLVGIFC 194
Query: 691 FH-HAYICTNIVGEKQF 738
F +I + GE F
Sbjct: 195 FALPTFIPVVLWGESAF 211
>AF260242-1|AAF97548.1| 333|Caenorhabditis elegans palmitoyl-CoA
fatty acid desaturaseFAT-5 protein.
Length = 333
Score = 94.7 bits (225), Expect = 6e-20
Identities = 37/78 (47%), Positives = 54/78 (69%)
Frame = +2
Query: 290 LFKAMWRTSIFAIFLYLCSGLGITAGAHRLWAHKSYKARLPLRILLTIFNTIAFQDAVVD 469
+F+A W T + L+ +G+T GAHRLWAH++YKA L R+ L + N+IAFQ+ ++D
Sbjct: 61 VFQAKWATVGWVFLLHTLGSMGVTGGAHRLWAHRAYKATLSWRVFLMLINSIAFQNDIID 120
Query: 470 WARDHRMHHKYSEPMRTP 523
WARDHR HHK+++ P
Sbjct: 121 WARDHRCHHKWTDTDADP 138
Score = 80.6 bits (190), Expect = 1e-15
Identities = 35/77 (45%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Frame = +1
Query: 511 DADPHNATRGFFFSHIGWLLLRKHPEIKAKGHTVDVNDLRNDPILRFQKKYYQILMPLAC 690
DADPH+ RG FF+H+GWLL++KH ++K +G +D++DL DP+L FQ+K Y L+ + C
Sbjct: 135 DADPHSTNRGMFFAHMGWLLVKKHDQLKIQGGKLDLSDLYEDPVLMFQRKNYLPLVGIFC 194
Query: 691 FH-HAYICTNIVGEKQF 738
F +I + GE F
Sbjct: 195 FALPTFIPVVLWGESAF 211
>Z34802-8|CAH10787.1| 704|Caenorhabditis elegans Hypothetical
protein M88.5b protein.
Length = 704
Score = 31.9 bits (69), Expect = 0.49
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = -2
Query: 269 HHRHANKEQNHISPHNLPRSLLC*GRYMGRCIF--WQVIGVGFVQYPRSLLFPLG 111
H++H N Q+H PH++P++L+ M RC+ W + V +Y ++ P G
Sbjct: 157 HNQHRNHNQSHSGPHHIPQNLM-----MPRCMLKDWPIRCVVEGKYHAVIIGPNG 206
>Z34802-7|CAA84338.2| 828|Caenorhabditis elegans Hypothetical
protein M88.5a protein.
Length = 828
Score = 31.9 bits (69), Expect = 0.49
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = -2
Query: 269 HHRHANKEQNHISPHNLPRSLLC*GRYMGRCIF--WQVIGVGFVQYPRSLLFPLG 111
H++H N Q+H PH++P++L+ M RC+ W + V +Y ++ P G
Sbjct: 281 HNQHRNHNQSHSGPHHIPQNLM-----MPRCMLKDWPIRCVVEGKYHAVIIGPNG 330
>AL117204-38|CAL49444.1| 982|Caenorhabditis elegans Hypothetical
protein Y116A8C.16c protein.
Length = 982
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/75 (22%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Frame = +3
Query: 78 YNQYIVSVKMPPQRKQEASWV---LYEADANNLPEDAPPHVPPSAEKRPWKIVWRNVILF 248
+ Q+I S K +R++ V + + +NL ++ + ++RPW W I
Sbjct: 380 FTQHIKSRKEDQKRQRGIGRVGQWMGRSYKDNLSKETRKMLAEGTDERPWFTYWITTIQI 439
Query: 249 FICMSVVFMEGTCSF 293
F+C+ + + G F
Sbjct: 440 FVCLLSLLLYGFAPF 454
>AL117204-31|CAB55122.2| 727|Caenorhabditis elegans Hypothetical
protein Y116A8C.16a protein.
Length = 727
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/75 (22%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Frame = +3
Query: 78 YNQYIVSVKMPPQRKQEASWV---LYEADANNLPEDAPPHVPPSAEKRPWKIVWRNVILF 248
+ Q+I S K +R++ V + + +NL ++ + ++RPW W I
Sbjct: 125 FTQHIKSRKEDQKRQRGIGRVGQWMGRSYKDNLSKETRKMLAEGTDERPWFTYWITTIQI 184
Query: 249 FICMSVVFMEGTCSF 293
F+C+ + + G F
Sbjct: 185 FVCLLSLLLYGFAPF 199
>U80952-2|AAB38094.1| 309|Caenorhabditis elegans Muscle attachment
abnormal protein1, isoform a protein.
Length = 309
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +3
Query: 105 MPPQRKQEASWVLYEADANNLPEDAPPHVPPSAEKRP 215
+PP +A + + +P +PPH PPS E P
Sbjct: 66 LPPTPHFQAPFSPHPPPVQQVPSYSPPHAPPSYETYP 102
>U80952-1|AAU20846.1| 315|Caenorhabditis elegans Muscle attachment
abnormal protein1, isoform b protein.
Length = 315
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +3
Query: 105 MPPQRKQEASWVLYEADANNLPEDAPPHVPPSAEKRP 215
+PP +A + + +P +PPH PPS E P
Sbjct: 72 LPPTPHFQAPFSPHPPPVQQVPSYSPPHAPPSYETYP 108
>Z98877-12|CAB63409.1| 528|Caenorhabditis elegans Hypothetical
protein Y69H2.12 protein.
Length = 528
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +3
Query: 285 CSFSKPCGGLLY-SPYFCTCVRDWVSQLAR-TDFGHTSPIKLGCH 413
C S C +L S Y CTC DW + D T P++ GC+
Sbjct: 171 CQNSGNCTMVLENSNYLCTCSPDWQGRRCEVADAVSTPPVQDGCY 215
>Z70718-6|CAA94677.1| 1029|Caenorhabditis elegans Hypothetical
protein C04G2.6 protein.
Length = 1029
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = -2
Query: 614 STVWPLALISGCFLNNNQPMWEKKNPRVALWGSASALNICGACDDHGPNPL 462
S + +AL + F N + ++++ R + L CG C D G NPL
Sbjct: 8 SGIHSVALHTTYFQNRSGKVYKRAEERYLRNDLSCGLAQCGTCKDFGTNPL 58
>AF026211-8|AAB71291.2| 234|Caenorhabditis elegans Hypothetical
protein T13B5.8 protein.
Length = 234
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = -2
Query: 569 NNQPMWEKKNPRVALWGSASALNICGACDDHGPNPL 462
NN+P+++ ++P A WG +A C + NP+
Sbjct: 166 NNKPIYDARDPLFAKWGERAASAHCKPETEQQINPV 201
>AF000264-2|AAC71121.1| 761|Caenorhabditis elegans Half transporter
(pgp related)protein 2 protein.
Length = 761
Score = 27.9 bits (59), Expect = 8.0
Identities = 16/58 (27%), Positives = 24/58 (41%)
Frame = -3
Query: 361 CDTQSRTQVQKYGEYRSPPHGFEKEQVPSINTTDMQIKNRITFLHTIFQGLFSAEGGT 188
CD V YG + EKEQ+ + MQ+ + +L + GL A G +
Sbjct: 430 CDNAILVAVLFYGGHLVMTGKMEKEQLITFLLYQMQLGENLYYLSYVMSGLMEAVGAS 487
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,682,406
Number of Sequences: 27780
Number of extensions: 471144
Number of successful extensions: 1455
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1358
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1453
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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