Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0140
         (721 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    24   1.4  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     23   2.5  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    21   7.6  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    21   7.6  

>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/22 (36%), Positives = 16/22 (72%)
 Frame = -2

Query: 123 GKLFSFLLFSYKNDLHRLYT*Y 58
           GK+ +F+L +Y+N+ ++L   Y
Sbjct: 97  GKILTFVLLNYRNEWNQLVAKY 118


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 24/101 (23%), Positives = 39/101 (38%), Gaps = 4/101 (3%)
 Frame = -2

Query: 720 SIIIMNSS-PRVFSSLC---NLTFQIINHLSTASL*SSCIPCMMTLGPP*NASPYFCFCF 553
           SII++N   P     +C    +   ++NHLS+ S             P  +  P+   C 
Sbjct: 97  SIIVVNRKMPGPSVEVCLGDEVIIDVVNHLSSDSTTIHWHGHHQKNSPYMDGVPFVTQCP 156

Query: 552 SYRSISAGGMFFTNLCIVVLWHVHTSRTLGLGSFSFFYVRV 430
            +  ++    F  +      WH H+      G+F  F VRV
Sbjct: 157 IHPGMTFRYHFNVHNSGTHFWHSHSGFQRSDGTFGPFIVRV 197


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +1

Query: 151 QNKEAKEKTFVEKQAERMQRLRNL 222
           QN+ AKE+   +K+ E   ++ NL
Sbjct: 206 QNRRAKERKQNKKRIEEKSQIDNL 229


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +1

Query: 151 QNKEAKEKTFVEKQAERMQR 210
           QN+ AKE+  V+K+ E  Q+
Sbjct: 205 QNRRAKERKQVKKREEVTQK 224


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,179
Number of Sequences: 336
Number of extensions: 3556
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)