Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0139
         (624 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    24   1.2  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   2.7  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   6.3  
AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450 ...    21   6.3  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   6.3  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   8.4  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   8.4  
AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    21   8.4  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   8.4  

>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 394 LFHNPICHHLARE 356
           L HNP+ HHL +E
Sbjct: 347 LHHNPMSHHLKQE 359


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +1

Query: 343 CISILHEPGDDKWGYEKASERW 408
           C+ +  E  +DK GY+K  E++
Sbjct: 409 CLELFEELAEDKDGYKKFYEQF 430


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = -2

Query: 353 IDMQTSPFLSIFGCHISVTNFIRGGLKGYSLGKL 252
           +  QT+P    +  H S+++ + GGL G  +  L
Sbjct: 66  VKQQTAPHGPPYAPHPSLSSGLGGGLSGMPMPAL 99


>AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 81  DINYNCEIYPEDTK 40
           D++YN  IYPE  K
Sbjct: 93  DLHYNPVIYPEPEK 106


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 494 MLQKNERTIFGIQKESCQMC*EKSRR 571
           +LQ +ERT  G +   CQ C ++  R
Sbjct: 149 VLQNHERTHTGEKPFECQECHKRFTR 174


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = +1

Query: 268 YPLRPPRMKFVTEIWH 315
           YP+  P M  V   WH
Sbjct: 174 YPILSPEMSQVAASWH 189


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = +1

Query: 268 YPLRPPRMKFVTEIWH 315
           YP+  P M  V   WH
Sbjct: 66  YPILSPEMSQVAASWH 81


>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 234 PPSYSVSGGPIMRTSH 187
           P S  V G P+M +SH
Sbjct: 141 PGSLQVPGAPMMMSSH 156


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +1

Query: 409 LPVHTVETILISVISMLAD 465
           L +HTV+T+L + +S  +D
Sbjct: 386 LVLHTVKTVLKTTMSTFSD 404


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,636
Number of Sequences: 336
Number of extensions: 3575
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15979473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)