Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0139
(624 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.) 156 2e-38
SB_26407| Best HMM Match : UQ_con (HMM E-Value=0) 111 3e-25
SB_15708| Best HMM Match : UQ_con (HMM E-Value=0) 69 2e-12
SB_44322| Best HMM Match : UQ_con (HMM E-Value=1.6e-37) 64 1e-10
SB_28696| Best HMM Match : UQ_con (HMM E-Value=5.3e-30) 58 8e-09
SB_7202| Best HMM Match : UQ_con (HMM E-Value=5.9e-05) 47 1e-05
SB_33407| Best HMM Match : UQ_con (HMM E-Value=0) 47 1e-05
SB_21041| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 8e-05
SB_24498| Best HMM Match : Galactosyl_T_2 (HMM E-Value=0) 44 1e-04
SB_5638| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_28812| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_26077| Best HMM Match : UQ_con (HMM E-Value=6e-18) 37 0.015
SB_33408| Best HMM Match : UQ_con (HMM E-Value=3.7e-07) 37 0.015
SB_26076| Best HMM Match : UQ_con (HMM E-Value=3.6e-15) 33 0.25
SB_3717| Best HMM Match : UQ_con (HMM E-Value=0.00017) 33 0.25
SB_57663| Best HMM Match : UQ_con (HMM E-Value=0.24) 32 0.43
SB_31103| Best HMM Match : CC (HMM E-Value=8.3) 29 2.3
SB_36855| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_26761| Best HMM Match : UQ_con (HMM E-Value=1.7e-06) 28 5.4
SB_47219| Best HMM Match : DUF414 (HMM E-Value=1.7) 28 5.4
SB_9528| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-39) 28 5.4
SB_50940| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
>SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 473
Score = 156 bits (378), Expect = 2e-38
Identities = 64/82 (78%), Positives = 76/82 (92%)
Frame = +1
Query: 256 FPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETI 435
FPKEYP RPP + F+++IWHPN+ KNG+VCISILHEPG+DK+GYEKA ERW P+HTVETI
Sbjct: 388 FPKEYPQRPPTLTFISDIWHPNVHKNGEVCISILHEPGEDKYGYEKADERWRPIHTVETI 447
Query: 436 LISVISMLADPNDESPANVDAA 501
++SVISMLA+PNDESPANVDAA
Sbjct: 448 MLSVISMLAEPNDESPANVDAA 469
Score = 82.6 bits (195), Expect = 2e-16
Identities = 31/48 (64%), Positives = 40/48 (83%)
Frame = +2
Query: 122 ELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLIFPR 265
EL K PVEGFSAGL DD D+YKWE++++GPP T YE G+FKA ++FP+
Sbjct: 343 ELQKKPVEGFSAGLFDDEDLYKWEIMVVGPPGTYYEEGYFKASMVFPK 390
>SB_26407| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 1282
Score = 111 bits (268), Expect = 3e-25
Identities = 50/91 (54%), Positives = 64/91 (70%)
Frame = +1
Query: 229 GRFL*STFNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERW 408
G + + +FP +YP PP +F+T++WHPNI ++GDVCISILH P DD E SERW
Sbjct: 1171 GGYFKAHMSFPHDYPYSPPTFRFLTKMWHPNIYESGDVCISILHPPVDDPQSGELPSERW 1230
Query: 409 LPVHTVETILISVISMLADPNDESPANVDAA 501
P V TIL+SVIS+L +PN SPANVDA+
Sbjct: 1231 NPTQNVRTILLSVISLLNEPNTFSPANVDAS 1261
Score = 67.7 bits (158), Expect = 7e-12
Identities = 26/55 (47%), Positives = 41/55 (74%)
Frame = +2
Query: 104 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLIFPRN 268
L+ +L +L + PVEGF+ + D+++ ++W+V I GPP TLY GG+FKAH+ FP +
Sbjct: 1129 LQLELKKLTEEPVEGFTVEVPDESNTFEWDVAIFGPPGTLYAGGYFKAHMSFPHD 1183
>SB_15708| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 145
Score = 69.3 bits (162), Expect = 2e-12
Identities = 33/102 (32%), Positives = 53/102 (51%)
Frame = +1
Query: 256 FPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETI 435
FP EYP +PP++ F T+I+HPNID+ G VC+ I+ + E W P E +
Sbjct: 48 FPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPII------------SPENWKPATKTEQV 95
Query: 436 LISVISMLADPNDESPANVDAAKE*ENDIRNSKRKLPDVLGK 561
+ ++++++ DP E P D A+E D + + D K
Sbjct: 96 IQALLALVHDPEPEHPLRADLAEEYSKDKKKFMKNAEDCTKK 137
>SB_44322| Best HMM Match : UQ_con (HMM E-Value=1.6e-37)
Length = 190
Score = 63.7 bits (148), Expect = 1e-10
Identities = 26/83 (31%), Positives = 46/83 (55%)
Frame = +1
Query: 259 PKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETIL 438
P+ YP PP+++FVT I+HPNID +G +C+ L P W P + ++L
Sbjct: 22 PERYPFEPPKVRFVTPIYHPNIDSSGRICLDTLKMP---------PKGMWKPALNISSVL 72
Query: 439 ISVISMLADPNDESPANVDAAKE 507
+++ ++A+PN + P + + E
Sbjct: 73 STILILMAEPNPDDPLMAEISNE 95
>SB_28696| Best HMM Match : UQ_con (HMM E-Value=5.3e-30)
Length = 204
Score = 57.6 bits (133), Expect = 8e-09
Identities = 24/79 (30%), Positives = 43/79 (54%)
Frame = +1
Query: 271 PLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVI 450
P PP+++FVT I+HPNID +G +C+ L P W P + ++L +++
Sbjct: 40 PFEPPKVRFVTPIYHPNIDSSGRICLDTLKMP---------PKGMWKPALNISSVLSTIL 90
Query: 451 SMLADPNDESPANVDAAKE 507
++A+PN + P + + E
Sbjct: 91 ILMAEPNPDDPLMAEISNE 109
>SB_7202| Best HMM Match : UQ_con (HMM E-Value=5.9e-05)
Length = 200
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/53 (39%), Positives = 33/53 (62%)
Frame = +2
Query: 104 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLIFP 262
++++L E+ +P SAG D D+Y+W I+GPP ++YEGG F + FP
Sbjct: 140 IQRELTEITLDPPPNCSAGPKGD-DLYEWYSTILGPPGSVYEGGVFFLDIHFP 191
>SB_33407| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 226
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/53 (39%), Positives = 33/53 (62%)
Frame = +2
Query: 104 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLIFP 262
++++L E+ +P SAG D D+Y+W I+GPP ++YEGG F + FP
Sbjct: 100 IQRELTEITLDPPPNCSAGPKGD-DLYEWYSTILGPPGSVYEGGVFFLDIHFP 151
>SB_21041| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 269
Score = 44.4 bits (100), Expect = 8e-05
Identities = 25/74 (33%), Positives = 41/74 (55%)
Frame = +1
Query: 283 PRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLA 462
PR F+T+I+HPN+ KNG++C++ L + W P ++ +L++V +L
Sbjct: 144 PRF-FLTKIFHPNVAKNGEICVNTL-------------KKDWKPDLGIKQVLLTVKCLLI 189
Query: 463 DPNDESPANVDAAK 504
PN ES N +A K
Sbjct: 190 VPNPESALNEEAGK 203
>SB_24498| Best HMM Match : Galactosyl_T_2 (HMM E-Value=0)
Length = 446
Score = 43.6 bits (98), Expect = 1e-04
Identities = 19/27 (70%), Positives = 23/27 (85%)
Frame = +1
Query: 382 GYEKASERWLPVHTVETILISVISMLA 462
GYE ++ERW PV +VE IL+SVISMLA
Sbjct: 2 GYESSAERWSPVQSVEKILLSVISMLA 28
>SB_5638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 151
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 5/48 (10%)
Frame = +1
Query: 229 GRFL*STFNFPKEYPLRPPRMKFVTE-----IWHPNIDKNGDVCISIL 357
G F P +YP+RPPR+K +T ++PN+ +NG VC+SI+
Sbjct: 27 GGFFYFLIRCPPDYPIRPPRVKLMTTGSGQVRFNPNLYRNGKVCLSII 74
Score = 34.3 bits (75), Expect = 0.082
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = +2
Query: 167 DDNDIYKWEVLIIGPPDTLYEGGFF 241
D +DI K LI GP DT YEGGFF
Sbjct: 6 DKDDIPKIHALITGPFDTPYEGGFF 30
>SB_28812| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 385
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/53 (33%), Positives = 31/53 (58%)
Frame = +2
Query: 104 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLIFP 262
L ++ EL +N E + A ++DN +++W + GPPDT + GG + +I P
Sbjct: 15 LMREAKEL-RNATELYHAQPLEDN-LFEWHFTVRGPPDTEFAGGRYHGRIILP 65
Score = 31.1 bits (67), Expect = 0.76
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +1
Query: 259 PKEYPLRPPRMKFVTEIWHPNIDKNGDVCISI-LHEPGDDKWGYEKASERWLPVHTVETI 435
P EYP++PP + +T I K +C+S+ H P E W P ++ T+
Sbjct: 65 PPEYPMKPPSIMLLTPNGRFEIGKK--ICLSMSAHHP-----------ETWQPSWSIRTV 111
Query: 436 LISVISML 459
L+++I +
Sbjct: 112 LMAIIGFM 119
>SB_26077| Best HMM Match : UQ_con (HMM E-Value=6e-18)
Length = 215
Score = 36.7 bits (81), Expect = 0.015
Identities = 15/35 (42%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = +1
Query: 262 KEYPLRPPRMKFVTEIWHPNID-KNGDVCISILHE 363
++YP PP + V I+HPN+D +G VC+S+L +
Sbjct: 62 EDYPNTPPVPRCVNNIYHPNMDLDDGSVCLSLLDD 96
>SB_33408| Best HMM Match : UQ_con (HMM E-Value=3.7e-07)
Length = 181
Score = 36.7 bits (81), Expect = 0.015
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = +2
Query: 152 SAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLIFP 262
SAG D +Y+W I+GPP ++YEGG F + FP
Sbjct: 43 SAGPKGDK-LYEWYSTILGPPGSVYEGGVFFLDIHFP 78
>SB_26076| Best HMM Match : UQ_con (HMM E-Value=3.6e-15)
Length = 243
Score = 32.7 bits (71), Expect = 0.25
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 265 EYPLRPPRMKFVTEIWHPNIDKNGDVCISILHE 363
+YP P + T+I+HPN+D VC+S+L +
Sbjct: 63 DYPNVAPSINCKTKIYHPNMDGYDGVCMSLLDD 95
>SB_3717| Best HMM Match : UQ_con (HMM E-Value=0.00017)
Length = 123
Score = 32.7 bits (71), Expect = 0.25
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +2
Query: 173 NDIYKWEVLIIGPPDTLYEGGFFKAHLIFP 262
+++++W + GPPDT + GG + +I P
Sbjct: 1 DNLFEWHFTVRGPPDTEFAGGRYHGRIILP 30
>SB_57663| Best HMM Match : UQ_con (HMM E-Value=0.24)
Length = 48
Score = 31.9 bits (69), Expect = 0.43
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = +1
Query: 403 RWLPVHTVETILISVISMLADPNDESPANVDAAKE 507
+W P + T+L+S+ ++L+ PN + P D A++
Sbjct: 2 KWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQ 36
>SB_31103| Best HMM Match : CC (HMM E-Value=8.3)
Length = 93
Score = 29.5 bits (63), Expect = 2.3
Identities = 23/73 (31%), Positives = 33/73 (45%)
Frame = -3
Query: 358 EVLICRHHHFYQYLDAIFQSQISSGVVSKDIPWEN*MCFKETSLV*CVWGTNNEDFPFVY 179
+VLI H H Y+ L ++ Q+ +G SK+ P+ N C + N D PF Y
Sbjct: 3 DVLIWAHEHSYEKLFRVYNQQMCNG--SKEAPYTN-PCAPVHIITGSAGCQENHD-PFKY 58
Query: 178 IIVIY*ASRKAFY 140
+ ASR Y
Sbjct: 59 HFGPWTASRSLDY 71
>SB_36855| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 115
Score = 29.1 bits (62), Expect = 3.1
Identities = 23/73 (31%), Positives = 33/73 (45%)
Frame = -3
Query: 358 EVLICRHHHFYQYLDAIFQSQISSGVVSKDIPWEN*MCFKETSLV*CVWGTNNEDFPFVY 179
+VLI H H Y+ L ++ Q+ +G SK+ P+ N C + N D PF Y
Sbjct: 3 DVLIWAHEHSYEKLFPVYNRQMCNG--SKEAPYTN-PCAPVHIITGSAGCQENHD-PFKY 58
Query: 178 IIVIY*ASRKAFY 140
+ ASR Y
Sbjct: 59 HFGPWTASRSLDY 71
>SB_26761| Best HMM Match : UQ_con (HMM E-Value=1.7e-06)
Length = 739
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 170 DNDIYKWEVLIIGPPDTLYEGGFFKAHLIFPRN 268
D+DI++ V+I GP T Y+ G F ++ P N
Sbjct: 632 DHDIFR--VMIEGPAGTPYDHGLFAFDILLPAN 662
>SB_47219| Best HMM Match : DUF414 (HMM E-Value=1.7)
Length = 704
Score = 28.3 bits (60), Expect = 5.4
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = +1
Query: 370 DDKWGYEKASERWLPVHTVETILISVISMLADPNDESPANVDAAKE*ENDIRNSKRKLP- 546
+ +W YE+A R+L + + L V + D + +S + V A + + D + + K P
Sbjct: 440 EQEWKYEQARRRFLASSSAVSALSGVSAGPDDMSIQSSSQVSFALD-QEDAPDGQHKPPV 498
Query: 547 -DVLGKVKKIASRSKRI 594
+ LG + K++ +R+
Sbjct: 499 EETLGFIPKLSEIQERL 515
>SB_9528| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-39)
Length = 841
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +2
Query: 146 GFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLIFP 262
G L+D+ K + I GPP+T +EGG + ++ P
Sbjct: 676 GIKVELVDET-FTKLKGEIRGPPETPFEGGTYNLDIVIP 713
>SB_50940| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 531
Score = 27.9 bits (59), Expect = 7.1
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +2
Query: 65 QL*LMSEPQSSLLLKKQLAELNKNPVE-GFSAGLIDDNDIYKWEVLIIGPP 214
+L L+ P++S K+ NKN GF L DDND Y W V + PP
Sbjct: 212 ELPLLLPPRNS---SKRSRHDNKNITHYGFWLCLRDDNDDYHWTVENVIPP 259
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,273,967
Number of Sequences: 59808
Number of extensions: 399792
Number of successful extensions: 1181
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1173
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1548368000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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