Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0139
(624 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 166 1e-41
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 128 3e-30
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 122 3e-28
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 73 2e-13
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 73 2e-13
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 68 5e-12
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 68 6e-12
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 68 6e-12
U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conju... 64 6e-11
Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical pr... 58 7e-09
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 55 4e-08
Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical pr... 54 8e-08
U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin conju... 54 8e-08
AF106565-1|AAC97374.1| 166|Caenorhabditis elegans ubiquitin-con... 54 8e-08
AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin con... 48 7e-06
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 46 2e-05
AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical... 46 2e-05
U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2 (c... 45 4e-05
AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 45 4e-05
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 44 7e-05
AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin con... 44 9e-05
AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin con... 42 5e-04
U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 37 0.010
U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin conju... 37 0.013
Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical pr... 34 0.095
U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical pr... 31 0.88
U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin conju... 30 1.5
AF016678-9|AAB66155.1| 155|Caenorhabditis elegans Hypothetical ... 30 1.5
Z80223-8|CAN99671.1| 177|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z80223-7|CAB02316.2| 613|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z81502-2|CAB04106.2| 720|Caenorhabditis elegans Hypothetical pr... 28 4.7
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 166 bits (404), Expect = 1e-41
Identities = 72/111 (64%), Positives = 87/111 (78%)
Frame = +1
Query: 211 PRHTIRGRFL*STFNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYE 390
P G F + +FP++YP +PP+MKF++EIWHPNIDK G+VCISILH+PGDDKWGYE
Sbjct: 44 PDTLYEGGFFKAILDFPRDYPQKPPKMKFISEIWHPNIDKEGNVCISILHDPGDDKWGYE 103
Query: 391 KASERWLPVHTVETILISVISMLADPNDESPANVDAAKE*ENDIRNSKRKL 543
+ ERWLPVHTVETIL+SVISML DPN ESPANVDAAK + K+K+
Sbjct: 104 RPEERWLPVHTVETILLSVISMLTDPNFESPANVDAAKMQRENYAEFKKKV 154
Score = 110 bits (265), Expect = 7e-25
Identities = 49/60 (81%), Positives = 56/60 (93%)
Frame = +2
Query: 89 QSSLLLKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLIFPRN 268
QSSLLLKKQLA++ + PV+GFSAGL+DDNDIYKWEVL+IGPPDTLYEGGFFKA L FPR+
Sbjct: 3 QSSLLLKKQLADMRRVPVDGFSAGLVDDNDIYKWEVLVIGPPDTLYEGGFFKAILDFPRD 62
Score = 41.5 bits (93), Expect = 5e-04
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +3
Query: 501 KRMRERYSEFKKKVARCVRKSQED 572
K RE Y+EFKKKVA+CVR+SQE+
Sbjct: 141 KMQRENYAEFKKKVAQCVRRSQEE 164
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 128 bits (309), Expect = 3e-30
Identities = 60/100 (60%), Positives = 74/100 (74%)
Frame = +1
Query: 256 FPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETI 435
FP++YPL PP+M+F I+HPNI +G VCISILH PGDD GYE ++ERW PV ++E I
Sbjct: 60 FPQDYPLSPPKMRFTCGIFHPNIYADGRVCISILHAPGDDPTGYELSNERWSPVQSIEKI 119
Query: 436 LISVISMLADPNDESPANVDAAKE*ENDIRNSKRKLPDVL 555
L+SV+SMLA+PNDESPANV AAK D R K+ D L
Sbjct: 120 LLSVVSMLAEPNDESPANVSAAKMWRED-RAQFEKIADSL 158
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/55 (38%), Positives = 32/55 (58%)
Frame = +2
Query: 104 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLIFPRN 268
L + EL P EG A ID+++ ++WE LI GP +T + G F A + FP++
Sbjct: 9 LMTEYKELTTRPPEGIIAAPIDEDNFFEWECLITGPEETCFANGVFPARITFPQD 63
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 122 bits (293), Expect = 3e-28
Identities = 53/100 (53%), Positives = 68/100 (68%)
Frame = +1
Query: 202 YWSPRHTIRGRFL*STFNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKW 381
Y P+ +G + ++ FP YP PP MKF T++WHPN+ +NGD+CISILH P DD
Sbjct: 47 YGPPKTLYQGGYFKASIRFPSNYPYSPPSMKFTTKVWHPNVYENGDLCISILHSPIDDPQ 106
Query: 382 GYEKASERWLPVHTVETILISVISMLADPNDESPANVDAA 501
E A ERW P +V TIL+SVIS+L +PN SPANVDA+
Sbjct: 107 SGELACERWNPTQSVRTILLSVISLLNEPNTSSPANVDAS 146
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/55 (49%), Positives = 36/55 (65%)
Frame = +2
Query: 104 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLIFPRN 268
L +L L PVEGF+ + +DN ++ W V I GPP TLY+GG+FKA + FP N
Sbjct: 15 LTMELKNLQSQPVEGFTIDVNEDN-LFVWTVGIYGPPKTLYQGGYFKASIRFPSN 68
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 72.5 bits (170), Expect = 2e-13
Identities = 33/98 (33%), Positives = 52/98 (53%)
Frame = +1
Query: 211 PRHTIRGRFL*STFNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYE 390
P +G T +FP +YP +PP++ F T I+HPNI+ NG +C+ IL
Sbjct: 41 PESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR---------- 90
Query: 391 KASERWLPVHTVETILISVISMLADPNDESPANVDAAK 504
+W P T+ +L+S+ S+L DPN + P + A+
Sbjct: 91 ---SQWSPALTISKVLLSICSLLCDPNPDDPLVPEIAR 125
Score = 48.0 bits (109), Expect = 5e-06
Identities = 20/53 (37%), Positives = 35/53 (66%)
Frame = +2
Query: 104 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLIFP 262
++K+L +L ++P SAG + D D++ W+ I+GPP++ Y+GG F + FP
Sbjct: 6 IQKELQDLGRDPPAQCSAGPVGD-DLFHWQATIMGPPESPYQGGVFFLTIHFP 57
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 72.5 bits (170), Expect = 2e-13
Identities = 33/98 (33%), Positives = 52/98 (53%)
Frame = +1
Query: 211 PRHTIRGRFL*STFNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYE 390
P +G T +FP +YP +PP++ F T I+HPNI+ NG +C+ IL
Sbjct: 41 PESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR---------- 90
Query: 391 KASERWLPVHTVETILISVISMLADPNDESPANVDAAK 504
+W P T+ +L+S+ S+L DPN + P + A+
Sbjct: 91 ---SQWSPALTISKVLLSICSLLCDPNPDDPLVPEIAR 125
Score = 48.0 bits (109), Expect = 5e-06
Identities = 20/53 (37%), Positives = 35/53 (66%)
Frame = +2
Query: 104 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLIFP 262
++K+L +L ++P SAG + D D++ W+ I+GPP++ Y+GG F + FP
Sbjct: 6 IQKELQDLGRDPPAQCSAGPVGD-DLFHWQATIMGPPESPYQGGVFFLTIHFP 57
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 68.1 bits (159), Expect = 5e-12
Identities = 30/83 (36%), Positives = 51/83 (61%)
Frame = +1
Query: 259 PKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETIL 438
P+EYP+ P+++F+T+I+HPNIDK G +C+ IL ++W P + T+L
Sbjct: 60 PEEYPMAAPKVRFMTKIYHPNIDKLGRICLDIL-------------KDKWSPALQIRTVL 106
Query: 439 ISVISMLADPNDESPANVDAAKE 507
+S+ ++L+ PN E P D A++
Sbjct: 107 LSIQALLSAPNPEDPLATDVAEQ 129
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 67.7 bits (158), Expect = 6e-12
Identities = 33/103 (32%), Positives = 59/103 (57%)
Frame = +1
Query: 247 TFNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTV 426
+ F +EYP +PP +KF+++++HPN+ +G +C+ IL RW P + V
Sbjct: 56 SLEFTEEYPNKPPTVKFISKMFHPNVYADGSICLDIL-------------QNRWSPTYDV 102
Query: 427 ETILISVISMLADPNDESPANVDAAKE*ENDIRNSKRKLPDVL 555
IL S+ S+L +PN SPAN AA+ + + R ++++ ++
Sbjct: 103 AAILTSIQSLLDEPNPNSPANSLAAQLYQENRREYEKRVQQIV 145
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/52 (38%), Positives = 28/52 (53%)
Frame = +2
Query: 104 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLIF 259
L + +L ++P G S +DN I WE +I GP +T +E G FK L F
Sbjct: 9 LMRDFKKLQEDPPAGVSGAPTEDN-ILTWEAIIFGPQETPFEDGTFKLSLEF 59
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 67.7 bits (158), Expect = 6e-12
Identities = 33/103 (32%), Positives = 59/103 (57%)
Frame = +1
Query: 247 TFNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTV 426
+ F +EYP +PP +KF+++++HPN+ +G +C+ IL RW P + V
Sbjct: 56 SLEFTEEYPNKPPTVKFISKMFHPNVYADGSICLDIL-------------QNRWSPTYDV 102
Query: 427 ETILISVISMLADPNDESPANVDAAKE*ENDIRNSKRKLPDVL 555
IL S+ S+L +PN SPAN AA+ + + R ++++ ++
Sbjct: 103 AAILTSIQSLLDEPNPNSPANSLAAQLYQENRREYEKRVQQIV 145
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/52 (38%), Positives = 28/52 (53%)
Frame = +2
Query: 104 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLIF 259
L + +L ++P G S +DN I WE +I GP +T +E G FK L F
Sbjct: 9 LMRDFKKLQEDPPAGVSGAPTEDN-ILTWEAIIFGPQETPFEDGTFKLSLEF 59
>U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein18 protein.
Length = 153
Score = 64.5 bits (150), Expect = 6e-11
Identities = 27/88 (30%), Positives = 49/88 (55%)
Frame = +1
Query: 256 FPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETI 435
FP +YP +PP++ F T+I+HPN+D+ G C+ I+ +E W P E +
Sbjct: 57 FPVDYPFKPPKVAFETKIYHPNVDEEGKFCLPIV------------TAENWKPATKTEQV 104
Query: 436 LISVISMLADPNDESPANVDAAKE*END 519
+++++S++ +P P D A+E + D
Sbjct: 105 MMALLSLINEPEPSHPIRADVAEEFQKD 132
Score = 33.5 bits (73), Expect = 0.13
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +2
Query: 104 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLIFP 262
L+K+L +L V+ + ++ ++ KW VL+I P Y G FK + FP
Sbjct: 7 LQKELGDLKNCGVKAYENVECEETNLLKWTVLLI-PDKEPYNKGAFKVGITFP 58
>Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical
protein R09B3.4 protein.
Length = 180
Score = 57.6 bits (133), Expect = 7e-09
Identities = 28/83 (33%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Frame = +1
Query: 259 PKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETIL 438
P EY PP +K +T++WHPNI+++G +C+SIL + D++G W P + ++
Sbjct: 84 PPEYNNVPPVVKCLTKVWHPNINEDGSICLSILRQNSLDQYG-------WRPTRNLTDVV 136
Query: 439 ISVISMLADPNDESPA-NVDAAK 504
++S+ D D + A N+ AA+
Sbjct: 137 HGLVSLFNDLMDFNDALNIQAAQ 159
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 55.2 bits (127), Expect = 4e-08
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +1
Query: 259 PKEYPLRPPRMKFVTEIWHPNI-DKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETI 435
P +YP PP +KF T+IWHPN+ + G +C+ IL ++W T+ T+
Sbjct: 63 PDQYPFSPPNVKFSTKIWHPNVSSQTGVICLDIL-------------KDQWAASLTLRTV 109
Query: 436 LISVISMLADPNDESPANVDAAKE 507
L+S+ +++ P + P + AK+
Sbjct: 110 LLSIQALMCTPEPKDPQDAVVAKQ 133
>Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical
protein F49E12.4 protein.
Length = 160
Score = 54.0 bits (124), Expect = 8e-08
Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Frame = +1
Query: 247 TFNFPKEYPLRPPRMKFVTEIWHPNIDK-NGDVCISILHEPGDDKWGYEKASERWLPVHT 423
T + EYP +PP +KF ++HPN+D ++C +L + E W P T
Sbjct: 65 TLDVNVEYPFKPPYLKFCHNVYHPNVDPVTCELCSPMLLQ------------ENWKPETT 112
Query: 424 VETILISVISMLADPNDESPANVDAAKE 507
+E +L+++I +L +P+ P N+DAA +
Sbjct: 113 MEDVLLNLIVLLNEPDLSRPVNIDAAHD 140
>U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein9 protein.
Length = 166
Score = 54.0 bits (124), Expect = 8e-08
Identities = 27/81 (33%), Positives = 43/81 (53%)
Frame = +1
Query: 256 FPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETI 435
F ++P PP+ KF ++HPN+ +G VC+S+L E D W P +++ +
Sbjct: 64 FKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDENKD-----------WKPSISIKQL 112
Query: 436 LISVISMLADPNDESPANVDA 498
LI + +L PN E PA +A
Sbjct: 113 LIGIQDLLNHPNIEDPAQAEA 133
Score = 32.3 bits (70), Expect = 0.29
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = +2
Query: 176 DIYKWEVLIIGPPDTLYEGGFFKAHLIF 259
+++ WE I G DT++EGG ++ ++F
Sbjct: 37 NLFNWECAIPGRKDTIWEGGLYRIRMLF 64
>AF106565-1|AAC97374.1| 166|Caenorhabditis elegans
ubiquitin-conjugating enzyme 9homolog protein.
Length = 166
Score = 54.0 bits (124), Expect = 8e-08
Identities = 27/81 (33%), Positives = 43/81 (53%)
Frame = +1
Query: 256 FPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETI 435
F ++P PP+ KF ++HPN+ +G VC+S+L E D W P +++ +
Sbjct: 64 FKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDENKD-----------WKPSISIKQL 112
Query: 436 LISVISMLADPNDESPANVDA 498
LI + +L PN E PA +A
Sbjct: 113 LIGIQDLLNHPNIEDPAQAEA 133
Score = 32.3 bits (70), Expect = 0.29
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = +2
Query: 176 DIYKWEVLIIGPPDTLYEGGFFKAHLIF 259
+++ WE I G DT++EGG ++ ++F
Sbjct: 37 NLFNWECAIPGRKDTIWEGGLYRIRMLF 64
>AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein26 protein.
Length = 203
Score = 47.6 bits (108), Expect = 7e-06
Identities = 23/55 (41%), Positives = 31/55 (56%)
Frame = +2
Query: 104 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLIFPRN 268
LKK L K PV A ++ N I +W +IIG P T YEGG + L+FP++
Sbjct: 13 LKKDYQRLLKEPVPFMKAAPLETN-ILEWRYIIIGAPKTPYEGGIYMGKLLFPKD 66
Score = 31.5 bits (68), Expect = 0.51
Identities = 21/86 (24%), Positives = 37/86 (43%)
Frame = +1
Query: 208 SPRHTIRGRFL*STFNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGY 387
+P+ G FPK++P +PP + +T + N +C+SI
Sbjct: 47 APKTPYEGGIYMGKLLFPKDFPFKPPAILMLTP--NGRFQTNTRLCLSI----------S 94
Query: 388 EKASERWLPVHTVETILISVISMLAD 465
+ + W P TV TI+ ++S + D
Sbjct: 95 DYHPDTWNPAWTVSTIITGLMSFMND 120
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 46.0 bits (104), Expect = 2e-05
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 16/101 (15%)
Frame = +1
Query: 253 NFPKEYPLRPPRM---------------KFVTEIWHPNID-KNGDVCISILHEPGDDKWG 384
+ P+ YP PP++ KFVT IWHPNI + G +C+ IL
Sbjct: 75 DIPEHYPFEPPKVTEIIFHIRAFEYIQAKFVTRIWHPNISSQTGTICLDIL--------- 125
Query: 385 YEKASERWLPVHTVETILISVISMLADPNDESPANVDAAKE 507
++W T+ T+L+S+ +ML P P + AK+
Sbjct: 126 ----KDKWTASLTLRTVLLSLQAMLCSPEPSDPQDAVVAKQ 162
>AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical
protein F52C6.12 protein.
Length = 78
Score = 46.0 bits (104), Expect = 2e-05
Identities = 18/46 (39%), Positives = 31/46 (67%)
Frame = +2
Query: 104 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFF 241
++K+L +L ++P S G + D D+Y W+ I+GPP++ Y+GG F
Sbjct: 6 IQKELHDLGRDPPAQCSTGSVGD-DLYHWQATIMGPPESPYQGGIF 50
>U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2
(conjugating enzyme)variant protein 2 protein.
Length = 230
Score = 45.2 bits (102), Expect = 4e-05
Identities = 28/96 (29%), Positives = 48/96 (50%)
Frame = +1
Query: 253 NFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVET 432
NF K +P+ PP +F T + HPN+D G + + +L + E W +++
Sbjct: 93 NFHK-WPIIPPICEFKTPLHHPNVDLRGSIYLKMLEQ------------EHWSSETSLKK 139
Query: 433 ILISVISMLADPNDESPANVDAAKE*ENDIRNSKRK 540
+L + ++LA P+ AN++A E EN N + K
Sbjct: 140 LLREISNLLATPDLTQAANIEAWMEYENQRENYEAK 175
>AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical
protein Y54E5B.4 protein.
Length = 152
Score = 45.2 bits (102), Expect = 4e-05
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Frame = +1
Query: 250 FNFPKEYPLRPPRMKFVTEIW--HPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHT 423
F F +YP P + FV E HP+I NG +C+SIL S+ W P +
Sbjct: 59 FTFGPQYPFNSPEVMFVGETIPAHPHIYSNGHICLSIL-------------SDDWTPALS 105
Query: 424 VETILISVISMLADPNDESPANVDA 498
V+++ +S++SML+ ++ DA
Sbjct: 106 VQSVCLSILSMLSSSKEKKHPIDDA 130
Score = 34.3 bits (75), Expect = 0.072
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +2
Query: 104 LKKQLAELNKNPVEGFSA-GLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLIF 259
L K+LA+L EG ND+ +W++ ++G TLY G F F
Sbjct: 9 LMKELAQLKSEAPEGLLVDNTSTSNDLKQWKIGVVGAEGTLYAGEVFMLQFTF 61
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 44.4 bits (100), Expect = 7e-05
Identities = 25/88 (28%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Frame = +1
Query: 262 KEYPLRPPRMKFVTEIWHPNIDK-NGDVCISILHEPGDDKWGYEKASERWLPVH-TVETI 435
+ YP + P +KF+T+IWHP++ +G +C LH+ + W PV T+ +
Sbjct: 406 ESYPFKAPTVKFITKIWHPSVSPFDGTIC---LHDVDNGVW----------PVSMTIYKV 452
Query: 436 LISVISMLADPNDESPANVDAAKE*END 519
LI + S +++ N++ P +V+ ++ N+
Sbjct: 453 LIVIQSWMSNFNEKEPIDVEILEQATNN 480
>AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein15 protein.
Length = 218
Score = 44.0 bits (99), Expect = 9e-05
Identities = 20/55 (36%), Positives = 35/55 (63%)
Frame = +2
Query: 104 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLIFPRN 268
L+K A+L ++PV+G A L ++++I +W + G PDT + GG++ +IF N
Sbjct: 24 LQKDYAKLMQDPVDGIKA-LPNEDNILEWHYCLRGSPDTPFYGGYYWGKVIFKEN 77
>AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein8 protein.
Length = 221
Score = 41.5 bits (93), Expect = 5e-04
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +1
Query: 253 NFPKEYPLRPPRMKFVTEIWHPNIDK-NGDVCISILHEPGDDKWGYEKASERWLPVHTVE 429
+ P +YP + P + F+ +I+HPNID+ +G VC+ ++++ + + +LP
Sbjct: 57 DMPDKYPFKSPSIGFLNKIFHPNIDEASGTVCLDVINQAWTALYDLTNIFDTFLP----- 111
Query: 430 TILISVISMLADPNDESPANVDAAK 504
+L PN P N +AA+
Sbjct: 112 -------QLLTYPNAADPLNGEAAR 129
>U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein17 protein.
Length = 679
Score = 37.1 bits (82), Expect = 0.010
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Frame = +1
Query: 256 FPKEYPLRPPRMKFVTE-----IWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVH 420
FP YP PP+ F+T ++PN+ +G +C+SIL W + E+W P
Sbjct: 468 FPTGYPFSPPKCAFLTTGSGNVRFNPNLYNDGKICLSIL-----GTW-EGRPEEKWNPYC 521
Query: 421 TVETILISV 447
++ +L+S+
Sbjct: 522 SLMQVLVSI 530
Score = 29.9 bits (64), Expect = 1.5
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +2
Query: 104 LKKQLAEL-NKNPVEGFSAGLI--DDNDIYKWEVLIIGPPDTLYEGGFFKAHLIFP 262
+ K+LA + N P+ ++ + D+ + +VLI GP DT Y G F+ + FP
Sbjct: 414 IAKELASIANALPLNASNSIYVCYDEGRVDIIKVLISGPDDTPYANGLFEFDIFFP 469
>U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein6 protein.
Length = 314
Score = 36.7 bits (81), Expect = 0.013
Identities = 19/53 (35%), Positives = 30/53 (56%)
Frame = +2
Query: 104 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLIFP 262
L K+ EL + P E + A ++DN +++W I G T +EGG + +IFP
Sbjct: 15 LMKEAMEL-RQPTEMYHAQPMEDN-LFEWHFTIRGTLGTDFEGGIYHGRIIFP 65
Score = 36.3 bits (80), Expect = 0.018
Identities = 22/68 (32%), Positives = 35/68 (51%)
Frame = +1
Query: 256 FPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETI 435
FP +YP++PP + +T + + N VC+SI GY E WLP ++ T
Sbjct: 64 FPADYPMKPPNLILLTP--NGRFELNKKVCLSIS--------GYH--PETWLPSWSIRTA 111
Query: 436 LISVISML 459
L+++I L
Sbjct: 112 LLALIGFL 119
>Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical
protein F39B2.2 protein.
Length = 139
Score = 33.9 bits (74), Expect = 0.095
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Frame = +2
Query: 74 LMSEPQSSLLLKKQLAELNKNPVEG-FSAGLIDDND--IYKWEVLIIGPPDTLYEGGFFK 244
++ P++ LL+ +L E K +G S GL DD+D + +W IIGPP T YE +
Sbjct: 1 MVDVPRNFRLLE-ELEEGQKGKGDGNISWGLEDDSDMTLTRWTASIIGPPRTPYESRIYN 59
Query: 245 AHL 253
+
Sbjct: 60 LQI 62
>U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical protein
F45E4.4 protein.
Length = 2361
Score = 30.7 bits (66), Expect = 0.88
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = -1
Query: 177 SLSSIKPAEKPSTGFLFSSANCFFNKSEDCGSDINYNCEIYPEDTKQMI 31
SL + ++P+ GFL + AN NK+++ GS I I P + I
Sbjct: 1100 SLPGSRMLKRPNFGFLSNIANDAINKAKEAGSQIQAAVPIKPSSSSSNI 1148
>U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein22 protein.
Length = 182
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +2
Query: 200 IIGPPDTLYEGGFFKAHLIFPRN 268
I GP DT YE G F+ L FP N
Sbjct: 35 IAGPADTPYETGVFEVDLTFPDN 57
>AF016678-9|AAB66155.1| 155|Caenorhabditis elegans Hypothetical
protein K07E8.10 protein.
Length = 155
Score = 29.9 bits (64), Expect = 1.5
Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Frame = -1
Query: 342 DITIFINIWMPYFSHKFHPGWSQRIFLGKIKCALKKPPSYSVSGGPIMRTSHLYISLSSI 163
DIT ++ F + + L + K + PP +S PIM Y S I
Sbjct: 70 DITRLSSVVNMLFKNHIKVTFDHARGLYRTKHDCQNPPKIVLSKRPIMDCQQFYQSSEDI 129
Query: 162 KPAEKPSTGFLFSSANC-FFNKS 97
+ PST + SS+N F+KS
Sbjct: 130 DEEQVPSTSNVQSSSNAPSFSKS 152
>Z80223-8|CAN99671.1| 177|Caenorhabditis elegans Hypothetical
protein F26D10.9b protein.
Length = 177
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -1
Query: 159 PAEKPSTGFLFSSANCFFNKSEDCGSDINYNCEIYPEDTKQMIFRQ 22
PA K GF + A FF +S+D NYN + E++ I+R+
Sbjct: 17 PAGKDHHGFSGNDAPIFFPESDDKLELDNYNTQFETENSALKIYRK 62
>Z80223-7|CAB02316.2| 613|Caenorhabditis elegans Hypothetical
protein F26D10.9a protein.
Length = 613
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -1
Query: 159 PAEKPSTGFLFSSANCFFNKSEDCGSDINYNCEIYPEDTKQMIFRQ 22
PA K GF + A FF +S+D NYN + E++ I+R+
Sbjct: 453 PAGKDHHGFSGNDAPIFFPESDDKLELDNYNTQFETENSALKIYRK 498
>Z81502-2|CAB04106.2| 720|Caenorhabditis elegans Hypothetical
protein F14B6.2 protein.
Length = 720
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/61 (22%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = -1
Query: 231 PSYSVSGGPIMRTSHLYISLSSIKPAEKPSTGFLFSSANC-FFNKSEDCGSDINYNCEIY 55
PS+S GP H++ +S P+ P+ F+ S+ ++ + D ++ Y +
Sbjct: 499 PSHSSHSGPAQAPQHIHFESASSTPSTPPAFHFIPPSSEAPYYVEINDADTETVYVSSVT 558
Query: 54 P 52
P
Sbjct: 559 P 559
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,726,557
Number of Sequences: 27780
Number of extensions: 315939
Number of successful extensions: 909
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 892
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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