Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0139
(624 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)... 140 9e-34
At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)... 138 2e-33
At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E... 138 4e-33
At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E... 74 7e-14
At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E... 73 2e-13
At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E... 73 2e-13
At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative ... 73 2e-13
At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative ... 73 2e-13
At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)... 72 4e-13
At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)... 72 4e-13
At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E... 72 4e-13
At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E... 72 4e-13
At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E... 72 4e-13
At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa ... 72 4e-13
At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa ... 72 4e-13
At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)... 72 4e-13
At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E... 71 5e-13
At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative ... 71 5e-13
At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative ... 69 3e-12
At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)... 67 1e-11
At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative ... 66 1e-11
At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative ... 66 2e-11
At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative ... 66 2e-11
At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative ... 66 2e-11
At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative ... 63 1e-10
At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative ... 62 3e-10
At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)... 62 3e-10
At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family pro... 62 3e-10
At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative ... 59 2e-09
At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative ... 58 6e-09
At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative stron... 58 6e-09
At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E... 56 2e-08
At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative ... 53 2e-07
At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10) id... 50 9e-07
At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative ... 49 3e-06
At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)... 49 3e-06
At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)... 47 9e-06
At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E... 45 5e-05
At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E... 45 5e-05
At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)... 44 6e-05
At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative ... 43 2e-04
At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E... 43 2e-04
At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative ... 40 0.002
At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)... 37 0.009
At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family pro... 36 0.029
At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family pro... 34 0.067
At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family pro... 34 0.067
At1g44000.1 68414.m05076 expressed protein 34 0.067
At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative ... 33 0.12
At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative ... 33 0.12
At4g10560.1 68417.m01729 DC1 domain-containing protein contains ... 32 0.36
At3g61630.1 68416.m06907 AP2 domain-containing transcription fac... 31 0.47
At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family pro... 31 0.82
At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family pro... 31 0.82
At1g79830.1 68414.m09326 expressed protein weak similarity to TA... 31 0.82
At3g09490.1 68416.m01128 chloroplast lumen common family protein... 29 3.3
At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family pro... 29 3.3
At1g06930.1 68414.m00737 expressed protein ; expression supporte... 29 3.3
At2g02680.1 68415.m00207 DC1 domain-containing protein contains ... 28 4.4
At5g05880.1 68418.m00647 UDP-glucoronosyl/UDP-glucosyl transfera... 27 7.7
At5g03360.1 68418.m00289 DC1 domain-containing protein contains ... 27 7.7
At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family pro... 27 7.7
At2g02690.1 68415.m00208 hypothetical protein 27 7.7
>At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)
E2; UbcAT3; identical to gi:2129757, S46656
Length = 167
Score = 140 bits (338), Expect = 9e-34
Identities = 61/111 (54%), Positives = 81/111 (72%)
Frame = +1
Query: 211 PRHTIRGRFL*STFNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYE 390
P G F + +FP+ YP+ PP + F +E+WHPN+ +G VCISILH PGDD GYE
Sbjct: 46 PDTLYEGGFFNAIMSFPENYPVSPPTVTFTSEMWHPNVYSDGKVCISILHPPGDDPHGYE 105
Query: 391 KASERWLPVHTVETILISVISMLADPNDESPANVDAAKE*ENDIRNSKRKL 543
ASERW PVHTVE+I++S+ISML+ PNDESPANV+AAKE ++ ++K+
Sbjct: 106 LASERWTPVHTVESIVLSIISMLSGPNDESPANVEAAKEWRDNRAEFRKKV 156
Score = 92.3 bits (219), Expect = 2e-19
Identities = 39/64 (60%), Positives = 52/64 (81%)
Frame = +2
Query: 77 MSEPQSSLLLKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLI 256
M+ Q+SLLL+KQL +L K PV+GFSAGL+D+ ++++W V I+GPPDTLYEGGFF A +
Sbjct: 1 MANNQASLLLQKQLKDLCKKPVDGFSAGLVDEKNVFQWSVSIMGPPDTLYEGGFFNAIMS 60
Query: 257 FPRN 268
FP N
Sbjct: 61 FPEN 64
Score = 35.1 bits (77), Expect = 0.038
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +3
Query: 501 KRMRERYSEFKKKVARCVRKSQE 569
K R+ +EF+KKV+RCVR+SQE
Sbjct: 143 KEWRDNRAEFRKKVSRCVRRSQE 165
>At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)
E2; identical to gi:992706
Length = 166
Score = 138 bits (335), Expect = 2e-33
Identities = 63/121 (52%), Positives = 84/121 (69%)
Frame = +1
Query: 211 PRHTIRGRFL*STFNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYE 390
P G F + +FP+ YP PP ++F ++IWHPN+ +G VCISILH PGDD GYE
Sbjct: 45 PDTLYEGGFFYAIMSFPQNYPNSPPTVRFTSDIWHPNVYPDGRVCISILHPPGDDPSGYE 104
Query: 391 KASERWLPVHTVETILISVISMLADPNDESPANVDAAKE*ENDIRNSKRKLPDVLGKVKK 570
ASERW PVHTVE+I++S+ISML+ PNDESPANV+AAKE K+K+ + K ++
Sbjct: 105 LASERWTPVHTVESIMLSIISMLSGPNDESPANVEAAKEWREKRDEFKKKVSRCVRKSQE 164
Query: 571 I 573
+
Sbjct: 165 M 165
Score = 90.6 bits (215), Expect = 7e-19
Identities = 39/60 (65%), Positives = 51/60 (85%)
Frame = +2
Query: 89 QSSLLLKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLIFPRN 268
Q+ LLL+KQL +L K+PV+GFSAGL+D+ +I++W V IIGPPDTLYEGGFF A + FP+N
Sbjct: 4 QACLLLQKQLKDLCKHPVDGFSAGLVDEKNIFEWSVTIIGPPDTLYEGGFFYAIMSFPQN 63
>At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E2;
identical to gi:992703, SP:P42747
Length = 198
Score = 138 bits (333), Expect = 4e-33
Identities = 62/121 (51%), Positives = 84/121 (69%)
Frame = +1
Query: 211 PRHTIRGRFL*STFNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYE 390
P G F + FP+ YP PP ++F +++WHPN+ +G VCISILH PGDD GYE
Sbjct: 77 PDTLYEGGFFNAIMTFPQNYPNSPPTVRFTSDMWHPNVYSDGRVCISILHPPGDDPSGYE 136
Query: 391 KASERWLPVHTVETILISVISMLADPNDESPANVDAAKE*ENDIRNSKRKLPDVLGKVKK 570
ASERW PVHTVE+I++S+ISML+ PNDESPANV+AAKE + K+K+ + K ++
Sbjct: 137 LASERWTPVHTVESIMLSIISMLSGPNDESPANVEAAKEWRDKRDEFKKKVSRCVRKSQE 196
Query: 571 I 573
+
Sbjct: 197 M 197
Score = 54.4 bits (125), Expect = 6e-08
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +2
Query: 167 DDNDIYKWEVLIIGPPDTLYEGGFFKAHLIFPRN 268
D +I++W V IIGPPDTLYEGGFF A + FP+N
Sbjct: 62 DCYNIFEWSVTIIGPPDTLYEGGFFNAIMTFPQN 95
>At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E2;
identical to gi:431261, SP:P42746
Length = 150
Score = 74.1 bits (174), Expect = 7e-14
Identities = 35/103 (33%), Positives = 61/103 (59%)
Frame = +1
Query: 247 TFNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTV 426
T +F ++YP +PP ++FV+ ++HPNI +G +C+ IL +W P++ V
Sbjct: 56 TLHFTEDYPNKPPIVRFVSRMFHPNIYADGSICLDILQN-------------QWSPIYDV 102
Query: 427 ETILISVISMLADPNDESPANVDAAKE*ENDIRNSKRKLPDVL 555
+L S+ S+L DPN +SPAN +AA+ + R RK+ +++
Sbjct: 103 AAVLTSIQSLLCDPNPDSPANAEAARLFSENKREYNRKVIEIV 145
Score = 43.2 bits (97), Expect = 1e-04
Identities = 22/45 (48%), Positives = 26/45 (57%)
Frame = +2
Query: 125 LNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLIF 259
L K+P G S G DN+I W LI GP DT ++GG FK L F
Sbjct: 16 LQKDPPVGIS-GAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHF 59
>At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 72.9 bits (171), Expect = 2e-13
Identities = 36/103 (34%), Positives = 58/103 (56%)
Frame = +1
Query: 247 TFNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTV 426
+ F ++YP +PP ++FV+ ++HPNI +G +C+ IL +W P++ V
Sbjct: 56 SLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQN-------------QWSPIYDV 102
Query: 427 ETILISVISMLADPNDESPANVDAAKE*ENDIRNSKRKLPDVL 555
IL S+ S+L DPN SPAN +AA+ R R++ DV+
Sbjct: 103 AAILTSIQSLLCDPNPNSPANSEAARMYSESKREYNRRVRDVV 145
Score = 43.6 bits (98), Expect = 1e-04
Identities = 24/61 (39%), Positives = 32/61 (52%)
Frame = +2
Query: 77 MSEPQSSLLLKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLI 256
MS P L++ L ++P G S G DN+I W +I GP DT ++GG FK L
Sbjct: 1 MSTPARKRLMR-DFKRLQQDPPAGIS-GAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQ 58
Query: 257 F 259
F
Sbjct: 59 F 59
>At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 72.9 bits (171), Expect = 2e-13
Identities = 36/103 (34%), Positives = 58/103 (56%)
Frame = +1
Query: 247 TFNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTV 426
+ F ++YP +PP ++FV+ ++HPNI +G +C+ IL +W P++ V
Sbjct: 56 SLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQN-------------QWSPIYDV 102
Query: 427 ETILISVISMLADPNDESPANVDAAKE*ENDIRNSKRKLPDVL 555
IL S+ S+L DPN SPAN +AA+ R R++ DV+
Sbjct: 103 AAILTSIQSLLCDPNPNSPANSEAARMYSESKREYNRRVRDVV 145
Score = 43.6 bits (98), Expect = 1e-04
Identities = 24/61 (39%), Positives = 32/61 (52%)
Frame = +2
Query: 77 MSEPQSSLLLKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLI 256
MS P L++ L ++P G S G DN+I W +I GP DT ++GG FK L
Sbjct: 1 MSTPARKRLMR-DFKRLQQDPPAGIS-GAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQ 58
Query: 257 F 259
F
Sbjct: 59 F 59
>At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 72.5 bits (170), Expect = 2e-13
Identities = 31/79 (39%), Positives = 48/79 (60%)
Frame = +1
Query: 247 TFNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTV 426
T +FP +YP +PP++ F T+++HPNI+ NG +C+ IL E+W P TV
Sbjct: 53 TIHFPPDYPFKPPKVAFRTKVYHPNINSNGSICLDIL-------------KEQWSPALTV 99
Query: 427 ETILISVISMLADPNDESP 483
+L+S+ S+L DPN + P
Sbjct: 100 SKVLLSICSLLTDPNPDDP 118
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/57 (35%), Positives = 34/57 (59%)
Frame = +2
Query: 92 SSLLLKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLIFP 262
+S + K+L +L ++P SAG D D+++W+ I+GP D+ + GG F + FP
Sbjct: 2 ASKRINKELRDLQRDPPVSCSAGPTGD-DMFQWQATIMGPADSPFAGGVFLVTIHFP 57
>At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 72.5 bits (170), Expect = 2e-13
Identities = 31/79 (39%), Positives = 48/79 (60%)
Frame = +1
Query: 247 TFNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTV 426
T +FP +YP +PP++ F T+++HPNI+ NG +C+ IL E+W P TV
Sbjct: 53 TIHFPPDYPFKPPKVAFRTKVYHPNINSNGSICLDIL-------------KEQWSPALTV 99
Query: 427 ETILISVISMLADPNDESP 483
+L+S+ S+L DPN + P
Sbjct: 100 SKVLLSICSLLTDPNPDDP 118
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/57 (35%), Positives = 34/57 (59%)
Frame = +2
Query: 92 SSLLLKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLIFP 262
+S + K+L +L ++P SAG D D+++W+ I+GP D+ + GG F + FP
Sbjct: 2 ASKRINKELRDLQRDPPVSCSAGPTGD-DMFQWQATIMGPADSPFAGGVFLVTIHFP 57
>At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 71.7 bits (168), Expect = 4e-13
Identities = 30/79 (37%), Positives = 48/79 (60%)
Frame = +1
Query: 247 TFNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTV 426
T +FP +YP +PP++ F T+++HPNI+ NG +C+ IL E+W P T+
Sbjct: 53 TIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTI 99
Query: 427 ETILISVISMLADPNDESP 483
+L+S+ S+L DPN + P
Sbjct: 100 SKVLLSICSLLTDPNPDDP 118
Score = 43.2 bits (97), Expect = 1e-04
Identities = 20/57 (35%), Positives = 34/57 (59%)
Frame = +2
Query: 92 SSLLLKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLIFP 262
+S + K+L +L K+P SAG + + D++ W+ I+GP ++ Y GG F + FP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSESPYAGGVFLVTIHFP 57
>At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 71.7 bits (168), Expect = 4e-13
Identities = 30/79 (37%), Positives = 48/79 (60%)
Frame = +1
Query: 247 TFNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTV 426
T +FP +YP +PP++ F T+++HPNI+ NG +C+ IL E+W P T+
Sbjct: 53 TIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTI 99
Query: 427 ETILISVISMLADPNDESP 483
+L+S+ S+L DPN + P
Sbjct: 100 SKVLLSICSLLTDPNPDDP 118
Score = 43.2 bits (97), Expect = 1e-04
Identities = 20/57 (35%), Positives = 34/57 (59%)
Frame = +2
Query: 92 SSLLLKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLIFP 262
+S + K+L +L K+P SAG + + D++ W+ I+GP ++ Y GG F + FP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSESPYAGGVFLVTIHFP 57
>At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 149
Score = 71.7 bits (168), Expect = 4e-13
Identities = 30/79 (37%), Positives = 48/79 (60%)
Frame = +1
Query: 247 TFNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTV 426
T +FP +YP +PP++ F T+++HPNI+ NG +C+ IL E+W P T+
Sbjct: 54 TIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTI 100
Query: 427 ETILISVISMLADPNDESP 483
+L+S+ S+L DPN + P
Sbjct: 101 SKVLLSICSLLTDPNPDDP 119
Score = 37.5 bits (83), Expect = 0.007
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +2
Query: 92 SSLLLKKQLAELNKNPVEG-FSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLIFP 262
+S + K+L +L K+P AG + + D++ W+ I+GP ++ Y GG F + FP
Sbjct: 2 ASKRILKELKDLQKDPPTSCIFAGPVAE-DMFHWQATIMGPAESPYSGGVFLVTIHFP 58
>At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 71.7 bits (168), Expect = 4e-13
Identities = 30/79 (37%), Positives = 48/79 (60%)
Frame = +1
Query: 247 TFNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTV 426
T +FP +YP +PP++ F T+++HPNI+ NG +C+ IL E+W P T+
Sbjct: 53 TIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTI 99
Query: 427 ETILISVISMLADPNDESP 483
+L+S+ S+L DPN + P
Sbjct: 100 SKVLLSICSLLTDPNPDDP 118
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/57 (35%), Positives = 34/57 (59%)
Frame = +2
Query: 92 SSLLLKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLIFP 262
+S + K+L +L K+P SAG + + D++ W+ I+GP ++ Y GG F + FP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPAESPYSGGVFLVTIHFP 57
>At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 71.7 bits (168), Expect = 4e-13
Identities = 30/79 (37%), Positives = 48/79 (60%)
Frame = +1
Query: 247 TFNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTV 426
T +FP +YP +PP++ F T+++HPNI+ NG +C+ IL E+W P T+
Sbjct: 53 TIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTI 99
Query: 427 ETILISVISMLADPNDESP 483
+L+S+ S+L DPN + P
Sbjct: 100 SKVLLSICSLLTDPNPDDP 118
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/57 (35%), Positives = 34/57 (59%)
Frame = +2
Query: 92 SSLLLKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLIFP 262
+S + K+L +L K+P SAG + + D++ W+ I+GP ++ Y GG F + FP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPAESPYSGGVFLVTIHFP 57
>At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 178
Score = 71.7 bits (168), Expect = 4e-13
Identities = 30/79 (37%), Positives = 48/79 (60%)
Frame = +1
Query: 247 TFNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTV 426
T +FP +YP +PP++ F T+++HPNI+ NG +C+ IL E+W P T+
Sbjct: 83 TIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTI 129
Query: 427 ETILISVISMLADPNDESP 483
+L+S+ S+L DPN + P
Sbjct: 130 SKVLLSICSLLTDPNPDDP 148
Score = 45.2 bits (102), Expect = 4e-05
Identities = 21/57 (36%), Positives = 34/57 (59%)
Frame = +2
Query: 92 SSLLLKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLIFP 262
+S + K+L +L K+P SAG + + D++ W+ I+GP D+ Y GG F + FP
Sbjct: 32 ASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSDSPYSGGVFLVTIHFP 87
>At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 148
Score = 71.7 bits (168), Expect = 4e-13
Identities = 30/79 (37%), Positives = 48/79 (60%)
Frame = +1
Query: 247 TFNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTV 426
T +FP +YP +PP++ F T+++HPNI+ NG +C+ IL E+W P T+
Sbjct: 53 TIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTI 99
Query: 427 ETILISVISMLADPNDESP 483
+L+S+ S+L DPN + P
Sbjct: 100 SKVLLSICSLLTDPNPDDP 118
Score = 45.2 bits (102), Expect = 4e-05
Identities = 21/57 (36%), Positives = 34/57 (59%)
Frame = +2
Query: 92 SSLLLKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLIFP 262
+S + K+L +L K+P SAG + + D++ W+ I+GP D+ Y GG F + FP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSDSPYSGGVFLVTIHFP 57
>At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)
E2; identical to gi:12643427, SP:P35134
Length = 148
Score = 71.7 bits (168), Expect = 4e-13
Identities = 33/85 (38%), Positives = 51/85 (60%)
Frame = +1
Query: 229 GRFL*STFNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERW 408
G FL S +FP +YP +PP++ F T+++HPNI+ NG +C+ IL E+W
Sbjct: 48 GVFLVS-IHFPPDYPFKPPKVSFKTKVYHPNINSNGSICLDIL-------------KEQW 93
Query: 409 LPVHTVETILISVISMLADPNDESP 483
P T+ +L+S+ S+L DPN + P
Sbjct: 94 SPALTISKVLLSICSLLTDPNPDDP 118
Score = 47.2 bits (107), Expect = 9e-06
Identities = 21/57 (36%), Positives = 35/57 (61%)
Frame = +2
Query: 92 SSLLLKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLIFP 262
+S + K+L +L K+P SAG + + D++ W+ I+GPP++ Y GG F + FP
Sbjct: 2 ASKRILKELKDLQKDPPSNCSAGPVAE-DMFHWQATIMGPPESPYAGGVFLVSIHFP 57
>At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E2;
identical to gi:2689242, SP:P42745
Length = 152
Score = 71.3 bits (167), Expect = 5e-13
Identities = 35/103 (33%), Positives = 58/103 (56%)
Frame = +1
Query: 247 TFNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTV 426
+ F ++YP +PP ++FV+ ++HPNI +G +C+ IL +W P++ V
Sbjct: 56 SLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL-------------QNQWSPIYDV 102
Query: 427 ETILISVISMLADPNDESPANVDAAKE*ENDIRNSKRKLPDVL 555
IL S+ S+L DPN SPAN +AA+ R R++ +V+
Sbjct: 103 AAILTSIQSLLCDPNPNSPANSEAARMFSESKREYNRRVREVV 145
Score = 43.6 bits (98), Expect = 1e-04
Identities = 24/61 (39%), Positives = 32/61 (52%)
Frame = +2
Query: 77 MSEPQSSLLLKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLI 256
MS P L++ L ++P G S G DN+I W +I GP DT ++GG FK L
Sbjct: 1 MSTPARKRLMR-DFKRLQQDPPAGIS-GAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQ 58
Query: 257 F 259
F
Sbjct: 59 F 59
>At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative
identical or nearly so to Ubiquitin-conjugating enzymes
SP|P35132, SP|P35131, SP|P35133 from {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 71.3 bits (167), Expect = 5e-13
Identities = 29/79 (36%), Positives = 48/79 (60%)
Frame = +1
Query: 247 TFNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTV 426
T +FP +YP +PP++ F T+++HPN++ NG +C+ IL E+W P T+
Sbjct: 53 TIHFPPDYPFKPPKVAFRTKVFHPNVNSNGSICLDIL-------------KEQWSPALTI 99
Query: 427 ETILISVISMLADPNDESP 483
+L+S+ S+L DPN + P
Sbjct: 100 SKVLLSICSLLTDPNPDDP 118
Score = 45.2 bits (102), Expect = 4e-05
Identities = 21/57 (36%), Positives = 34/57 (59%)
Frame = +2
Query: 92 SSLLLKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLIFP 262
+S + K+L +L K+P SAG + + D++ W+ I+GP D+ Y GG F + FP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSDSPYSGGVFLVTIHFP 57
>At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P35133 Ubiquitin-conjugating
enzyme E2-17 kDa 10 (EC 6.3.2.19) (Ubiquitin- protein
ligase 10) (Ubiquitin carrier protein 10) {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 68.5 bits (160), Expect = 3e-12
Identities = 28/77 (36%), Positives = 48/77 (62%)
Frame = +1
Query: 253 NFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVET 432
+FP +YP +PP++ F T+++HPNI+ NG++C+ IL ++W P T+
Sbjct: 55 HFPPDYPFKPPKVVFRTKVFHPNINSNGNICLDIL-------------KDQWSPALTISK 101
Query: 433 ILISVISMLADPNDESP 483
+L+S+ S+L DPN + P
Sbjct: 102 VLLSICSLLTDPNPDDP 118
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/51 (37%), Positives = 31/51 (60%)
Frame = +2
Query: 110 KQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLIFP 262
K+L EL ++P SAG + D++ W+ I+GP ++ Y GG F ++ FP
Sbjct: 8 KELKELQRDPPVSCSAGPTGE-DMFHWQATIMGPNESPYSGGVFLVNIHFP 57
>At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)
nearly identical to ubiquitin-conjugating enzyme UBC20
[Arabidopsis thaliana] GI:22530867; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 180
Score = 66.9 bits (156), Expect = 1e-11
Identities = 36/105 (34%), Positives = 58/105 (55%)
Frame = +1
Query: 247 TFNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTV 426
+ +F +YP +PP++KF T +HPN+D G++C+ IL ++W + V
Sbjct: 87 SLSFSNDYPFKPPKVKFETCCFHPNVDVYGNICLDIL-------------QDKWSSAYDV 133
Query: 427 ETILISVISMLADPNDESPANVDAAKE*ENDIRNSKRKLPDVLGK 561
TIL+S+ S+L +PN SP N AA+ N + RK+ + L K
Sbjct: 134 RTILLSIQSLLGEPNISSPLNTQAAQLWSN--QEEYRKMVEKLYK 176
Score = 29.1 bits (62), Expect = 2.5
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +2
Query: 104 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLIF 259
L+ +L L G SA +DN I+ W+ I G DT++EG ++ L F
Sbjct: 40 LQSELMGLMMGGGPGISAFPEEDN-IFCWKGTITGSKDTVFEGTEYRLSLSF 90
>At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative
strong similar to ubiquitin-conjugating enzymes E2-17
from [Arabidopsis thaliana] SP|P35134, SP|P35132,
SP|P35133; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 149
Score = 66.5 bits (155), Expect = 1e-11
Identities = 28/79 (35%), Positives = 44/79 (55%)
Frame = +1
Query: 247 TFNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTV 426
+ +F +YP +PP++ F T+++HPNID G +C+ IL E+W P T
Sbjct: 54 SIDFSSDYPFKPPKVNFKTKVYHPNIDSKGSICLDIL-------------KEQWSPAPTT 100
Query: 427 ETILISVISMLADPNDESP 483
+L+S+ S+L DPN P
Sbjct: 101 SKVLLSICSLLTDPNPNDP 119
Score = 46.0 bits (104), Expect = 2e-05
Identities = 18/56 (32%), Positives = 33/56 (58%)
Frame = +2
Query: 92 SSLLLKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLIF 259
+S + ++L ++ ++P SAG + + DI+ W+ I+GP D+ Y GG F + F
Sbjct: 2 ASKRISRELRDMQRHPPANCSAGPVAEEDIFHWQATIMGPHDSPYSGGVFTVSIDF 57
>At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 65.7 bits (153), Expect = 2e-11
Identities = 29/82 (35%), Positives = 51/82 (62%)
Frame = +1
Query: 259 PKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETIL 438
P+EYP+ P+++F+T+I+HPNIDK G +C+ IL ++W P + T+L
Sbjct: 61 PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDIL-------------KDKWSPALQIRTVL 107
Query: 439 ISVISMLADPNDESPANVDAAK 504
+S+ ++L+ PN + P + + AK
Sbjct: 108 LSIQALLSAPNPDDPLSENIAK 129
Score = 41.1 bits (92), Expect = 6e-04
Identities = 21/51 (41%), Positives = 27/51 (52%)
Frame = +2
Query: 110 KQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLIFP 262
K+ L P G SA +DN Y + V+I+GP + YEGG FK L P
Sbjct: 12 KETQRLLSEPAPGISASPSEDNMRY-FNVMILGPTQSPYEGGVFKLELFLP 61
>At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 65.7 bits (153), Expect = 2e-11
Identities = 29/82 (35%), Positives = 51/82 (62%)
Frame = +1
Query: 259 PKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETIL 438
P+EYP+ P+++F+T+I+HPNIDK G +C+ IL ++W P + T+L
Sbjct: 61 PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDIL-------------KDKWSPALQIRTVL 107
Query: 439 ISVISMLADPNDESPANVDAAK 504
+S+ ++L+ PN + P + + AK
Sbjct: 108 LSIQALLSAPNPDDPLSENIAK 129
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/51 (39%), Positives = 27/51 (52%)
Frame = +2
Query: 110 KQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLIFP 262
K+ L P G SA ++N Y + V+I+GP + YEGG FK L P
Sbjct: 12 KETQRLLSEPAPGISASPSEENMRY-FNVMILGPTQSPYEGGVFKLELFLP 61
>At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 120
Score = 65.7 bits (153), Expect = 2e-11
Identities = 29/82 (35%), Positives = 51/82 (62%)
Frame = +1
Query: 259 PKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETIL 438
P+EYP+ P+++F+T+I+HPNIDK G +C+ IL ++W P + T+L
Sbjct: 28 PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDIL-------------KDKWSPALQIRTVL 74
Query: 439 ISVISMLADPNDESPANVDAAK 504
+S+ ++L+ PN + P + + AK
Sbjct: 75 LSIQALLSAPNPDDPLSENIAK 96
Score = 31.1 bits (67), Expect = 0.62
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 188 WEVLIIGPPDTLYEGGFFKAHLIFP 262
+ V+I+GP + YEGG FK L P
Sbjct: 4 FNVMILGPTQSPYEGGVFKLELFLP 28
>At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative
similar to SP|O60015 Ubiquitin-conjugating enzyme E2-21
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) {Pichia angusta}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 157
Score = 63.3 bits (147), Expect = 1e-10
Identities = 28/84 (33%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Frame = +1
Query: 250 FNFPKEYPLRPPRMKFVTEIWHPNID-KNGDVCISILHEPGDDKWGYEKASERWLPVHTV 426
F+ P+ YPL+PP+++F+T+I+HPN+ K G++C+ IL W P T+
Sbjct: 58 FSVPEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDIL-------------KNAWSPAWTL 104
Query: 427 ETILISVISMLADPNDESPANVDA 498
+++ ++I+++A P +SP N D+
Sbjct: 105 QSVCRAIIALMAHPEPDSPLNCDS 128
Score = 41.1 bits (92), Expect = 6e-04
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +2
Query: 104 LKKQLAELNKNPVEGFSAGLI-DDNDIYKWEVLIIGPPDTLYEGGFFKAHLIFP 262
L K+ E+ + V LI DD +I+KW LI GP +T YEGG F+ P
Sbjct: 8 LFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVP 61
>At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P50550 Ubiquitin-like protein
SUMO-1 conjugating enzyme (EC 6.3.2.19) (SUMO- 1-protein
ligase) (Ubiquitin carrier protein)
(Ubiquitin-conjugating enzyme UbcE2A) {Xenopus laevis};
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 160
Score = 62.1 bits (144), Expect = 3e-10
Identities = 33/89 (37%), Positives = 48/89 (53%)
Frame = +1
Query: 229 GRFL*STFNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERW 408
G F T +F ++YP +PP+ KF +HPN+ +G VC+SIL+E +G W
Sbjct: 56 GGFFPLTMHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNE----DYG-------W 104
Query: 409 LPVHTVETILISVISMLADPNDESPANVD 495
P TV+ IL+ + +L PN PA D
Sbjct: 105 RPAITVKQILVGIQDLLDTPNPADPAQTD 133
>At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)
nearly identical to ubiquitin-conjugating enzyme UBC19
[Arabidopsis thaliana] GI:22530865; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 181
Score = 62.1 bits (144), Expect = 3e-10
Identities = 35/105 (33%), Positives = 56/105 (53%)
Frame = +1
Query: 247 TFNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTV 426
+ F +YP + P++KF T +HPN+D G++C+ IL ++W + V
Sbjct: 88 SLTFSNDYPFKSPKVKFETCCFHPNVDLYGNICLDIL-------------QDKWSSAYDV 134
Query: 427 ETILISVISMLADPNDESPANVDAAKE*ENDIRNSKRKLPDVLGK 561
TIL+S+ S+L +PN SP N AA+ N + RK+ + L K
Sbjct: 135 RTILLSIQSLLGEPNISSPLNNQAAQLWSN--QEEYRKMVEKLYK 177
Score = 29.9 bits (64), Expect = 1.4
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +2
Query: 104 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLIF 259
L+ +L L G SA +DN I+ W+ I G DT++EG ++ L F
Sbjct: 41 LQSELMGLMMGADPGISAFPEEDN-IFCWKGTITGSKDTVFEGTEYRLSLTF 91
>At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family
protein similar to Ubiquitin-conjugating enzyme E2-16
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) from {Schizosaccharomyces pombe}
SP|P46595, {Caenorhabditis elegans} SP|P35129; contains
Pfam profile PF00179: Ubiquitin-conjugating enzyme
Length = 154
Score = 62.1 bits (144), Expect = 3e-10
Identities = 27/79 (34%), Positives = 44/79 (55%)
Frame = +1
Query: 247 TFNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTV 426
+ FP +YP +PP+ F T I+HPNI+ G +C++IL ++W P V
Sbjct: 59 SIKFPTDYPFKPPKFTFKTPIYHPNINDEGSICMNIL-------------KDKWTPALMV 105
Query: 427 ETILISVISMLADPNDESP 483
E +L+S++ +L PN + P
Sbjct: 106 EKVLLSILLLLEKPNPDDP 124
Score = 39.1 bits (87), Expect = 0.002
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = +2
Query: 149 FSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLIFP 262
FS G + N+IY+W +I GP T YEGG F + FP
Sbjct: 27 FSIGQ-NSNNIYEWTAVIRGPDGTPYEGGMFNLSIKFP 63
>At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative
similar to Ubiquitin-conjugating enzyme E2
(Ubiquitin-protein ligase) (Ubiquitin carrier protein)
from {Xenopus laevis} SP|P51669, {Schizosaccharomyces
pombe} SP|P46595, {Caenorhabditis elegans} SP|P35129;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 409
Score = 59.3 bits (137), Expect = 2e-09
Identities = 30/105 (28%), Positives = 54/105 (51%)
Frame = +1
Query: 259 PKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETIL 438
P+ YP +PP + F T I+HPNID +G +C+ IL+ P W P + T+L
Sbjct: 71 PERYPFQPPIVSFATPIYHPNIDNSGRICLDILNLP---------PKGAWQPSLNISTVL 121
Query: 439 ISVISMLADPNDESPANVDAAKE*ENDIRNSKRKLPDVLGKVKKI 573
S+ +L++PN + + ++E + + + K ++ K K+
Sbjct: 122 TSMRLLLSEPNPDDGLMCEVSREYKYNRQTFDYKAREMTEKYAKV 166
>At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin conjugating enzyme
[Lycopersicon esculentum] GI:886679; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 192
Score = 57.6 bits (133), Expect = 6e-09
Identities = 27/84 (32%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Frame = +1
Query: 259 PKEYPLRPPRMKFVTEIWHPNI-DKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETI 435
P YP PP+M+F T++WHPNI ++G +C+ IL ++W P T++T
Sbjct: 59 PDGYPFEPPKMQFSTKVWHPNISSQSGAICLDIL-------------KDQWSPALTLKTA 105
Query: 436 LISVISMLADPNDESPANVDAAKE 507
L+S+ ++L+ P + P + A++
Sbjct: 106 LVSIQALLSAPEPKDPQDAVVAEQ 129
>At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative strong
similarity to gi:6635457 RUB1 conjugating enzyme
[Arabidopsis thaliana]; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 185
Score = 57.6 bits (133), Expect = 6e-09
Identities = 31/93 (33%), Positives = 48/93 (51%)
Frame = +1
Query: 223 IRGRFL*STFNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASE 402
+ G F+ S F YP P++K T+++HPNID G+VC++IL E
Sbjct: 75 LSGNFVFS-FQVSNMYPHEAPKVKCKTKVYHPNIDLEGNVCLNILRED------------ 121
Query: 403 RWLPVHTVETILISVISMLADPNDESPANVDAA 501
W PV + T++ + + +PN E P N +AA
Sbjct: 122 -WKPVLNINTVIYGLFHLFTEPNYEDPLNHEAA 153
>At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 145
Score = 56.0 bits (129), Expect = 2e-08
Identities = 19/39 (48%), Positives = 30/39 (76%)
Frame = +1
Query: 247 TFNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHE 363
T +FP +YP +PP++ F T+++HPNI+ NG +C+ IL E
Sbjct: 53 TIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKE 91
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/57 (35%), Positives = 34/57 (59%)
Frame = +2
Query: 92 SSLLLKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLIFP 262
+S + K+L +L K+P SAG + + D++ W+ I+GP ++ Y GG F + FP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPAESPYSGGVFLVTIHFP 57
>At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 112
Score = 52.8 bits (121), Expect = 2e-07
Identities = 21/41 (51%), Positives = 31/41 (75%)
Frame = +1
Query: 259 PKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKW 381
P+EYP+ P+++F+T+I+HPNIDK G +C+ IL DKW
Sbjct: 61 PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDIL----KDKW 97
Score = 41.1 bits (92), Expect = 6e-04
Identities = 21/51 (41%), Positives = 27/51 (52%)
Frame = +2
Query: 110 KQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLIFP 262
K+ L P G SA +DN Y + V+I+GP + YEGG FK L P
Sbjct: 12 KETQRLLSEPAPGISASPSEDNMRY-FNVMILGPTQSPYEGGVFKLELFLP 61
>At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10)
identical to ubiquitin-conjugating enzyme COP10
[Arabidopsis thaliana] GI:20065779; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 182
Score = 50.4 bits (115), Expect = 9e-07
Identities = 25/53 (47%), Positives = 33/53 (62%)
Frame = +2
Query: 104 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLIFP 262
+++++AELN +P SAG DN +Y W IIGP T YEGG F +IFP
Sbjct: 41 IQREMAELNIDPPPDCSAGPKGDN-LYHWIATIIGPSGTPYEGGIFFLDIIFP 92
Score = 50.4 bits (115), Expect = 9e-07
Identities = 25/77 (32%), Positives = 40/77 (51%)
Frame = +1
Query: 256 FPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETI 435
FP +YP +PP++ F T I+H N+D GD+ ++IL + W P T+ +
Sbjct: 91 FPSDYPFKPPKLVFKTRIYHCNVDTAGDLSVNILR-------------DSWSPALTITKV 137
Query: 436 LISVISMLADPNDESPA 486
L ++ S+ P SPA
Sbjct: 138 LQAIRSIFLKPEPYSPA 154
>At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme from [Oryza
sativa] GI:1373001, {Arabidopsis thaliana} SP|P35134,
SP|P35131; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 177
Score = 48.8 bits (111), Expect = 3e-06
Identities = 26/89 (29%), Positives = 47/89 (52%)
Frame = +1
Query: 253 NFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVET 432
+ P +YP PP++ F T+I+HPNI + G++ + IL RW T+
Sbjct: 84 HIPPKYPYEPPKITFKTKIFHPNISEIGEIFVDIL-------------GSRWSSALTINL 130
Query: 433 ILISVISMLADPNDESPANVDAAKE*END 519
+L+S+ S+L++P + + AA+ + D
Sbjct: 131 VLLSICSILSNPVEPLLVSNHAARLYQKD 159
>At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)
E2; identical to ubiquitin-conjugating enzyme 15
GI:2801442 from [Arabidopsis thaliana]
Length = 161
Score = 48.8 bits (111), Expect = 3e-06
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Frame = +1
Query: 256 FPKEYPLRPPRMKFVTEI-WHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVET 432
FP+ YP+ P++ FV+ HP+I NG +C+ IL+ + W P TV +
Sbjct: 69 FPEHYPMEAPQVVFVSPAPSHPHIYSNGHICLDILY-------------DSWSPAMTVNS 115
Query: 433 ILISVISML-ADPNDESPANVD 495
+ IS++SML + P + PA+ D
Sbjct: 116 VCISILSMLSSSPAKQRPADND 137
Score = 37.5 bits (83), Expect = 0.007
Identities = 18/55 (32%), Positives = 30/55 (54%)
Frame = +2
Query: 104 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLIFPRN 268
L+K+L+E NP GF + D+ + KW + + G P TLY ++ + FP +
Sbjct: 20 LQKELSEWQLNPPTGFRHKVTDN--LQKWTIDVTGAPGTLYANETYQLQVEFPEH 72
>At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)
E2; identical to gi:2801448
Length = 161
Score = 47.2 bits (107), Expect = 9e-06
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Frame = +1
Query: 256 FPKEYPLRPPRMKFVTEI-WHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVET 432
FP+ YP+ P++ FV HP+I NG +C+ IL+ + W P TV +
Sbjct: 69 FPQHYPMEAPQVIFVPPAPLHPHIYSNGHICLDILY-------------DSWSPAMTVSS 115
Query: 433 ILISVISML-ADPNDESPANVD 495
+ IS++SML + P + P + D
Sbjct: 116 VCISILSMLSSSPEKQRPTDND 137
Score = 37.9 bits (84), Expect = 0.005
Identities = 18/55 (32%), Positives = 30/55 (54%)
Frame = +2
Query: 104 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLIFPRN 268
L+K+L+E NP GF + D+ + KW + + G P TLY + + FP++
Sbjct: 20 LQKELSEWQVNPPTGFKHRVTDN--LQKWVIEVTGAPGTLYANETYNLQVEFPQH 72
>At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E2;
identical to gi:431265, SP:P42748
Length = 187
Score = 44.8 bits (101), Expect = 5e-05
Identities = 17/53 (32%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +1
Query: 259 PKEYPLRPPRMKFVTEIWHPNIDK-NGDVCISILHEPGDDKWGYEKASERWLP 414
P YP + P + F+T+I+HPN+D+ +G VC+ ++++ + E +LP
Sbjct: 56 PDAYPYKSPSVGFITKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFETFLP 108
>At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E2;
identical to gi:431269, SP:P42749
Length = 185
Score = 44.8 bits (101), Expect = 5e-05
Identities = 17/53 (32%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +1
Query: 259 PKEYPLRPPRMKFVTEIWHPNIDK-NGDVCISILHEPGDDKWGYEKASERWLP 414
P YP + P + F+T+I+HPN+D+ +G VC+ ++++ + E +LP
Sbjct: 56 PDAYPYKSPSVGFITKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFETFLP 108
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/52 (28%), Positives = 29/52 (55%)
Frame = +2
Query: 107 KKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLIFP 262
K++ +L K + + +I+D + ++ V GP D++YEGG +K + P
Sbjct: 6 KRREMDLMKLMMSDYKVEMINDG-MQEFFVEFSGPKDSIYEGGVWKIRVELP 56
>At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)
E2; identical to gi:2801444, GB:AAC39325 from
[Arabidopsis thaliana] (Plant Mol. Biol. 23 (2), 387-396
(1993))
Length = 161
Score = 44.4 bits (100), Expect = 6e-05
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +1
Query: 253 NFPKEYPLRPPRMKFVTEI-WHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVE 429
+FP+ YP+ P++ F+ HP+I NG +C+ IL++ W P TV
Sbjct: 68 DFPEHYPMESPQVIFLHPAPLHPHIYSNGHICLDILYDS-------------WSPAMTVS 114
Query: 430 TILISVISMLADPNDE 477
+I IS++SML+ ++
Sbjct: 115 SICISILSMLSSSTEK 130
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/55 (32%), Positives = 30/55 (54%)
Frame = +2
Query: 104 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLIFPRN 268
L+K+L E NP GF + D+ + +W + +IG P TLY ++ + FP +
Sbjct: 20 LQKELVEWQMNPPTGFKHKVTDN--LQRWIIEVIGAPGTLYANDTYQLQVDFPEH 72
>At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative
similar to SP|Q16763 Ubiquitin-conjugating enzyme E2-24
kDa (EC 6.3.2.19) (Ubiquitin- protein ligase) (Ubiquitin
carrier protein) {Homo sapiens}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 251
Score = 42.7 bits (96), Expect = 2e-04
Identities = 24/80 (30%), Positives = 40/80 (50%)
Frame = +1
Query: 265 EYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILIS 444
++P PP+ F+T+I+HPN+ NG++C++ L + W P + +L
Sbjct: 68 DFPHSPPKGYFMTKIFHPNVASNGEICVNTL-------------KKDWNPSLGLRHVLSV 114
Query: 445 VISMLADPNDESPANVDAAK 504
V +L +P ES N A K
Sbjct: 115 VRCLLIEPFPESALNEQAGK 134
Score = 31.5 bits (68), Expect = 0.47
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +2
Query: 104 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHL 253
L K+L L+++P +G +++D D + I GP T YE G F+ L
Sbjct: 15 LAKELKSLDESPPDGIKV-VVNDEDFSQICADIEGPVGTPYENGLFRMKL 63
>At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E2;
identical to gi|431267, SP:P42750, PIR:S52661; contains
a ubiquitin-conjugating enzymes active site (PDOC00163)
Length = 183
Score = 42.7 bits (96), Expect = 2e-04
Identities = 17/53 (32%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +1
Query: 259 PKEYPLRPPRMKFVTEIWHPNIDK-NGDVCISILHEPGDDKWGYEKASERWLP 414
P+ YP + P + FV +I+HPN+D+ +G VC+ ++++ + E +LP
Sbjct: 56 PEAYPYKSPSVGFVNKIYHPNVDESSGAVCLDVINQTWSPMFDLINVFESFLP 108
Score = 29.5 bits (63), Expect = 1.9
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = +2
Query: 107 KKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLIFP 262
K++ ++ K + + ++D D+ + V GP D+LY+GG +K + P
Sbjct: 6 KRREMDMMKLMMSDYKVDTVND-DLQMFYVTFHGPTDSLYQGGVWKIKVELP 56
>At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative
similar to Non-Canonical UBiquitin Conjugating Enzyme 1
(NCUBE1) from [Gallus gallus] GI:7362937, [Mus musculus]
GI:7363050, [Homo sapiens] GI:7362973; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 309
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/51 (31%), Positives = 31/51 (60%)
Frame = +2
Query: 110 KQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLIFP 262
+++ E+ NP + F + +++N I++W+ I GP DT +EGG + + P
Sbjct: 18 QEVKEMQANPSDDFMSLPLEEN-IFEWQFAIRGPGDTEFEGGIYHGRIQLP 67
Score = 35.1 bits (77), Expect = 0.038
Identities = 24/104 (23%), Positives = 46/104 (44%)
Frame = +1
Query: 259 PKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETIL 438
P +YP +PP +T + + N +C+SI + Y E W P +V T L
Sbjct: 67 PADYPFKPPSFMLLTP--NGRFETNTKICLSISN--------YH--PEHWQPSWSVRTAL 114
Query: 439 ISVISMLADPNDESPANVDAAKE*ENDIRNSKRKLPDVLGKVKK 570
+++I+ + + + +VD K+ + R+ P G ++
Sbjct: 115 VALIAFMPTSPNGALGSVDYPKDERRTLAIKSRETPPKYGSPER 158
>At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)
E2; identical to gi:2801446
Length = 161
Score = 37.1 bits (82), Expect = 0.009
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +1
Query: 256 FPKEYPLRPPRMKFVTEI-WHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVET 432
FP+ YP+ P++ F HP+I NG +C+ +L+ + W P + +
Sbjct: 69 FPEHYPMEAPQVIFQHPAPLHPHIYSNGHICLDVLY-------------DSWSPAMRLSS 115
Query: 433 ILISVISMLA 462
I +S++SML+
Sbjct: 116 ICLSILSMLS 125
Score = 33.1 bits (72), Expect = 0.15
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = +2
Query: 104 LKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLIFPRN 268
L+K+ E NP GF + D+ + +W + + G P TLY ++ + FP +
Sbjct: 20 LQKEFMEWQTNPPSGFKHRVSDN--LQRWIIEVHGVPGTLYANETYQLQVEFPEH 72
>At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 158
Score = 35.5 bits (78), Expect = 0.029
Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +2
Query: 152 SAGLIDDNDIY--KWEVLIIGPPDTLYEGGFFKAHL 253
S G+ D +DIY W I+GPP+T YEG F+ L
Sbjct: 33 SYGMDDADDIYMQSWTGTILGPPNTAYEGKIFQLKL 68
>At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family protein
low similarity to ubiquitin-conjugating BIR-domain enzyme
APOLLON [Homo sapiens] GI:8489831, ubiquitin-conjugating
enzyme [Mus musculus] GI:3319990; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1102
Score = 34.3 bits (75), Expect = 0.067
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Frame = +1
Query: 250 FNFPKEYPLRPPRMKFVTEIW--HPNIDKNGDVCISILHE---PGDDKWGYEKAS 399
F+ P +YP PP + + W +PN+ + G VC+S+L+ G++ W + +S
Sbjct: 903 FHLPSDYPSVPPSAYYHSGGWRLNPNLYEEGKVCLSLLNTWTGRGNEVWDPKSSS 957
>At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family
protein similar to ubiquitin-conjugating enzyme
GB:3319990 from [Mus musculus]; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1163
Score = 34.3 bits (75), Expect = 0.067
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Frame = +1
Query: 256 FPKEYPLRPPRMKFVTEIW--HPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVH-TV 426
FP YP PP++ + + +PN+ K G VC+S++ W +K E+WLP T+
Sbjct: 660 FPDTYPSVPPKVHYHSGGLRINPNLYKCGKVCLSLI-----STWTGKK-REKWLPKESTM 713
Query: 427 ETILISVISML 459
+L+S+ +++
Sbjct: 714 LQLLVSIQALI 724
>At1g44000.1 68414.m05076 expressed protein
Length = 260
Score = 34.3 bits (75), Expect = 0.067
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = -3
Query: 403 VLKLFHNPICHHLAREVLICRHHHFYQYLDAIFQSQIS 290
++ +H+P+ H RE+ RHHH +++ + + +IS
Sbjct: 5 IVPYYHHPVLSHPNREIFSHRHHHHHRFCNNLLNRRIS 42
>At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 243
Score = 33.5 bits (73), Expect = 0.12
Identities = 20/62 (32%), Positives = 29/62 (46%)
Frame = +2
Query: 77 MSEPQSSLLLKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLI 256
M+E L+K+ L K PV A NDI +W ++ G T + GGF+ +
Sbjct: 1 MAEKACIKRLQKEYRALCKEPVSHVVARP-SPNDILEWHYVLEGSEGTPFAGGFYYGKIK 59
Query: 257 FP 262
FP
Sbjct: 60 FP 61
>At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 237
Score = 33.5 bits (73), Expect = 0.12
Identities = 20/62 (32%), Positives = 29/62 (46%)
Frame = +2
Query: 77 MSEPQSSLLLKKQLAELNKNPVEGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLI 256
M+E L+K+ L K PV A NDI +W ++ G T + GGF+ +
Sbjct: 1 MAEKACIKRLQKEYRALCKEPVSHVVARP-SPNDILEWHYVLEGSEGTPFAGGFYYGKIK 59
Query: 257 FP 262
FP
Sbjct: 60 FP 61
Score = 28.7 bits (61), Expect = 3.3
Identities = 21/79 (26%), Positives = 33/79 (41%)
Frame = +1
Query: 229 GRFL*STFNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERW 408
G F FP EYP +PP + T K +C+S+ + E W
Sbjct: 51 GGFYYGKIKFPPEYPYKPPGITMTTPNGRFMTQKK--ICLSM----------SDFHPESW 98
Query: 409 LPVHTVETILISVISMLAD 465
P+ +V +IL ++S + D
Sbjct: 99 NPMWSVSSILTGLLSFMMD 117
>At4g10560.1 68417.m01729 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 703
Score = 31.9 bits (69), Expect = 0.36
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -3
Query: 376 CHHLAREVLICRHHHFYQYLDAIFQSQISSGVVSKDI 266
C L R + I RHHH + + Q ++S GV K+I
Sbjct: 318 CIDLPRVIRISRHHHRISFTPSFDQERLSCGVCQKNI 354
>At3g61630.1 68416.m06907 AP2 domain-containing transcription
factor, putative transcription factor Pti6 -
Lycopersicon esculentum, PIR:T07728
Length = 315
Score = 31.5 bits (68), Expect = 0.47
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +2
Query: 89 QSSLLLKKQLAELNKNPVEGFSAGLIDDNDIYKWEV 196
QS+LL ++++ +N E F GLIDD + W+V
Sbjct: 268 QSTLLPNTEVSKQGENETEDFEFGLIDDFESSPWDV 303
>At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 30.7 bits (66), Expect = 0.82
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +2
Query: 152 SAGLIDDNDIY--KWEVLIIGPPDTLYEGGFFKAHL 253
S G+ D +DIY W IIGP +T++EG ++ L
Sbjct: 35 SYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKL 70
>At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 145
Score = 30.7 bits (66), Expect = 0.82
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +2
Query: 152 SAGLIDDNDIY--KWEVLIIGPPDTLYEGGFFKAHL 253
S G+ D +DIY W IIGP +T++EG ++ L
Sbjct: 34 SYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKL 69
>At1g79830.1 68414.m09326 expressed protein weak similarity to TATA
element modulatory factor (TMF) (Swiss-Prot:P82094)
[Homo sapiens]
Length = 927
Score = 30.7 bits (66), Expect = 0.82
Identities = 17/66 (25%), Positives = 31/66 (46%)
Frame = +1
Query: 319 NIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLADPNDESPANVDA 498
NI+KN D + + D + AS W P +++ V+S + + +DE P ++
Sbjct: 29 NIEKNFDNALGF--DDKSDSAAEDAASSMWPPAVDTKSLFDPVMSFMGNTSDEKPDTLED 86
Query: 499 AKE*EN 516
+ EN
Sbjct: 87 SVRTEN 92
>At3g09490.1 68416.m01128 chloroplast lumen common family protein 2
TPR domains; similar to chloroplast lumen proteins
[GI:4056493 (F3G5.19)(At2g37400)] and [GI:7413648
(T22P11.180),(At5g02590)] [Arabidopsis thaliana]; +
Length = 334
Score = 28.7 bits (61), Expect = 3.3
Identities = 23/77 (29%), Positives = 34/77 (44%)
Frame = +1
Query: 361 EPGDDKWGYEKASERWLPVHTVETILISVISMLADPNDESPANVDAAKE*ENDIRNSKRK 540
EP + KW KA R L H S I + ++ P VDA + NSK K
Sbjct: 143 EPYERKWPAMKA--RILSYHGKSE---SAIEAFEEILEKDPIRVDAYHYLVMEYYNSKPK 197
Query: 541 LPDVLGKVKKIASRSKR 591
L ++ ++ K+ R K+
Sbjct: 198 LTEIEKRINKVIRRCKK 214
>At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 159
Score = 28.7 bits (61), Expect = 3.3
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +2
Query: 152 SAGLIDDNDIY--KWEVLIIGPPDTLYEGGFFKAHL 253
S G+ D +DI W I+GP +T YEG F+ L
Sbjct: 33 SYGMDDADDILMQSWTGTILGPHNTAYEGKIFQLKL 68
>At1g06930.1 68414.m00737 expressed protein ; expression supported
by MPSS
Length = 169
Score = 28.7 bits (61), Expect = 3.3
Identities = 16/38 (42%), Positives = 18/38 (47%)
Frame = +1
Query: 184 QMGSPHYWSPRHTIRGRFL*STFNFPKEYPLRPPRMKF 297
Q G+P S R + G S FNFP PL PP F
Sbjct: 39 QPGTPRRLSKRSSSSGFNSDSDFNFPVSAPLTPPPSYF 76
>At2g02680.1 68415.m00207 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 649
Score = 28.3 bits (60), Expect = 4.4
Identities = 9/37 (24%), Positives = 21/37 (56%)
Frame = -3
Query: 376 CHHLAREVLICRHHHFYQYLDAIFQSQISSGVVSKDI 266
C ++ + + I RHHH + ++ + + S GV +++
Sbjct: 274 CIYIPQTIRISRHHHCISFTSSLLKGKWSCGVCRQEV 310
>At5g05880.1 68418.m00647 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 451
Score = 27.5 bits (58), Expect = 7.7
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -3
Query: 238 ETSLV*CVWGTNNEDFPFVYII 173
ET L+ WG +N D PF++++
Sbjct: 279 ETELMEIAWGLSNSDQPFLWVV 300
>At5g03360.1 68418.m00289 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 1610
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -3
Query: 376 CHHLAREVLICRHHHFYQYLDAIFQSQISSGVVSKDI 266
C L R + I RHHH + + + S GV K I
Sbjct: 318 CFSLPRVIRISRHHHRISFTHSFEKGDWSCGVCRKKI 354
>At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family
protein low similarity to ubiquitin-conjugating
BIR-domain enzyme APOLLON [Homo sapiens] GI:8489831,
ubiquitin-conjugating enzyme [Mus musculus] GI:3319990;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 907
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/36 (33%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = +1
Query: 259 PKEYPLRPPRMKFVTEIW--HPNIDKNGDVCISILH 360
P +YP PP + + + +PN+ ++G VC+S+L+
Sbjct: 718 PPQYPHEPPMVHYHSGGMRLNPNLYESGRVCLSLLN 753
>At2g02690.1 68415.m00208 hypothetical protein
Length = 623
Score = 27.5 bits (58), Expect = 7.7
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = -3
Query: 376 CHHLAREVLICRHHHFYQYLDAIFQSQISSGVVSKDI 266
C H+ + + I RHHH + ++ + S GV +++
Sbjct: 278 CIHVPQTIRISRHHHRVSFTSSLPLEKWSCGVCRREV 314
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,733,623
Number of Sequences: 28952
Number of extensions: 289631
Number of successful extensions: 995
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 879
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 953
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1265787216
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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