Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0135
(781 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical ... 34 0.099
AY825249-1|AAX24101.1| 728|Caenorhabditis elegans sodium-couple... 34 0.13
AL110485-24|CAB60372.4| 728|Caenorhabditis elegans Hypothetical... 34 0.13
U58728-1|AAB00588.1| 430|Caenorhabditis elegans Temporarily ass... 31 0.70
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 31 0.70
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 31 0.70
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 31 0.70
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 31 0.92
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 31 0.92
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 31 0.92
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 31 0.92
AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical ... 30 1.6
AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical ... 30 1.6
AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical ... 30 1.6
AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein. 30 1.6
Z81101-7|CAB03200.1| 613|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z70752-6|CAA94759.1| 613|Caenorhabditis elegans Hypothetical pr... 30 2.1
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 30 2.1
AF003145-6|AAK68678.1| 1420|Caenorhabditis elegans Mtk1/mekk4 ho... 30 2.1
AF003145-5|AAB57718.1| 1418|Caenorhabditis elegans Mtk1/mekk4 ho... 30 2.1
Z73105-2|CAA97439.2| 803|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z66497-4|CAA91284.1| 401|Caenorhabditis elegans Hypothetical pr... 29 3.7
U41535-6|AAK67248.1| 482|Caenorhabditis elegans Lin-26 related ... 29 3.7
U41535-5|AAK67252.1| 548|Caenorhabditis elegans Lin-26 related ... 29 3.7
AJ130960-1|CAA10264.1| 482|Caenorhabditis elegans LIR-2B protei... 29 3.7
AJ130959-1|CAA10263.1| 548|Caenorhabditis elegans LIR-2A protei... 29 3.7
Z81070-11|CAB03006.3| 1086|Caenorhabditis elegans Hypothetical p... 29 4.9
AF160248-1|AAD45518.1| 860|Caenorhabditis elegans ribonuclease ... 29 4.9
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical pr... 28 6.5
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 28 6.5
U49956-4|AAK77620.1| 1117|Caenorhabditis elegans Variable abnorm... 28 6.5
U49956-3|AAK77621.1| 1122|Caenorhabditis elegans Variable abnorm... 28 6.5
U41994-13|AAK31527.2| 1425|Caenorhabditis elegans Neuronal symme... 28 6.5
U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein. 28 6.5
AF040269-1|AAC38970.1| 1122|Caenorhabditis elegans Eph receptor ... 28 6.5
AC024763-10|AAK93862.2| 598|Caenorhabditis elegans Hypothetical... 28 6.5
Z46266-16|CAD44094.1| 1088|Caenorhabditis elegans Hypothetical p... 28 8.6
Z46266-14|CAA86419.1| 1048|Caenorhabditis elegans Hypothetical p... 28 8.6
Z46266-13|CAA86418.1| 1137|Caenorhabditis elegans Hypothetical p... 28 8.6
Z46266-12|CAA86415.1| 1259|Caenorhabditis elegans Hypothetical p... 28 8.6
Z46266-11|CAA86417.1| 1170|Caenorhabditis elegans Hypothetical p... 28 8.6
Z46266-10|CAA86416.1| 1207|Caenorhabditis elegans Hypothetical p... 28 8.6
Z37979-7|CAD44150.1| 1088|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z37979-5|CAA86037.1| 1048|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z37979-4|CAA86036.1| 1137|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z37979-3|CAA86033.1| 1259|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z37979-2|CAA86035.1| 1170|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z37979-1|CAA86034.1| 1207|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z37140-8|CAA85503.1| 1207|Caenorhabditis elegans Hypothetical pr... 28 8.6
U46673-4|AAC48152.2| 1535|Caenorhabditis elegans Laminin related... 28 8.6
AB011282-1|BAA24962.1| 210|Caenorhabditis elegans GAP-2-6 protein. 28 8.6
AB011281-1|BAA24961.1| 254|Caenorhabditis elegans GAP-2-5 protein. 28 8.6
AB011280-1|BAA24960.1| 1120|Caenorhabditis elegans GAP-2-4 protein. 28 8.6
AB011279-1|BAA24959.1| 594|Caenorhabditis elegans GAP-2-3 protein. 28 8.6
AB011278-1|BAA24958.1| 280|Caenorhabditis elegans GAP-2-2 protein. 28 8.6
>AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical
protein Y38C9A.1 protein.
Length = 1484
Score = 34.3 bits (75), Expect = 0.099
Identities = 26/92 (28%), Positives = 36/92 (39%)
Frame = +1
Query: 175 PIPAVRTSGTKKRGVPTGHGREVYGQFTSLKTSPQTQFESHSRPDLRSPQQLEREIIRQR 354
P P R+ +K PT FTS + SP T + +RP +P L I R
Sbjct: 1358 PKPVTRSPQVQKPIKPTASR-----SFTSFQNSPSTSSSALARPSTSTPSHLNHNIARP- 1411
Query: 355 GLVEGRRAASHPHLLDEPQSRPEASTPYSHDR 450
+ +R HL+ PQ+ S P R
Sbjct: 1412 ---QAQRPQQQAHLVQRPQAH-RLSAPAMQQR 1439
>AY825249-1|AAX24101.1| 728|Caenorhabditis elegans sodium-coupled
neutral amino acidtransporter protein.
Length = 728
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/78 (21%), Positives = 35/78 (44%), Gaps = 5/78 (6%)
Frame = +1
Query: 265 KTSPQTQFESHSRPDLRSPQQLEREIIRQRGLVEGRRAASHPHLLDEPQ-----SRPEAS 429
+ +P +F+S S+PD + Q ++ Q+ + + ++ P +D +RP
Sbjct: 13 RQAPSVKFDSPSKPDPQQVSQQSNQLSSQKSIQQSTQSKIDPSRIDTKNTTVTTTRPTLD 72
Query: 430 TPYSHDRSRRNSHANLLE 483
TP + +R+ N E
Sbjct: 73 TPPEEEEEKRDGFGNSFE 90
>AL110485-24|CAB60372.4| 728|Caenorhabditis elegans Hypothetical
protein Y46G5A.30 protein.
Length = 728
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/78 (21%), Positives = 35/78 (44%), Gaps = 5/78 (6%)
Frame = +1
Query: 265 KTSPQTQFESHSRPDLRSPQQLEREIIRQRGLVEGRRAASHPHLLDEPQ-----SRPEAS 429
+ +P +F+S S+PD + Q ++ Q+ + + ++ P +D +RP
Sbjct: 13 RQAPSVKFDSPSKPDPQQVSQQSNQLSSQKSIQQSTQSKIDPSRIDTKNTTVTTTRPTLD 72
Query: 430 TPYSHDRSRRNSHANLLE 483
TP + +R+ N E
Sbjct: 73 TPPEEEEEKRDGFGNSFE 90
>U58728-1|AAB00588.1| 430|Caenorhabditis elegans Temporarily
assigned gene nameprotein 294 protein.
Length = 430
Score = 31.5 bits (68), Expect = 0.70
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Frame = +3
Query: 621 IHENVYRRTPDSHNRR-TP-DSVGPKREDTLTTGQAANDENA--SQKSADSVTIL 773
I NV N++ TP DS+GP D+LTT Q + A + SA SV +L
Sbjct: 193 IESNVNTELVKEENKKPTPEDSIGPVSSDSLTTNQGEDQSTAQTASTSAPSVVLL 247
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 31.5 bits (68), Expect = 0.70
Identities = 30/146 (20%), Positives = 56/146 (38%)
Frame = +1
Query: 82 PTKDATEPPSQIAGDVGVAPSTPTSGAWFRRPIPAVRTSGTKKRGVPTGHGREVYGQFTS 261
P ++A P+Q APS PT + P+ T K P+ +E + +
Sbjct: 3568 PKEEAPSEPTQEDVPKEAAPSEPTQENVPKEAAPSEPTKDVPKEAAPSEPIQEEVPKEAT 3627
Query: 262 LKTSPQTQFESHSRPDLRSPQQLEREIIRQRGLVEGRRAASHPHLLDEPQSRPEASTPYS 441
L Q Q E R + P Q+++ + +E ++ ++ + EA P +
Sbjct: 3628 LSEPTQEQSEVSKRSEPVEPTQIQQAASEEETPLE----ETNETVVQTNEDVKEAEVPEN 3683
Query: 442 HDRSRRNSHANLLEATEENLHRTMKE 519
+ + ++L A E H + E
Sbjct: 3684 AEAQKVVDSSDLQVAASEIAHLAIDE 3709
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 31.5 bits (68), Expect = 0.70
Identities = 30/146 (20%), Positives = 56/146 (38%)
Frame = +1
Query: 82 PTKDATEPPSQIAGDVGVAPSTPTSGAWFRRPIPAVRTSGTKKRGVPTGHGREVYGQFTS 261
P ++A P+Q APS PT + P+ T K P+ +E + +
Sbjct: 3568 PKEEAPSEPTQEDVPKEAAPSEPTQENVPKEAAPSEPTKDVPKEAAPSEPIQEEVPKEAT 3627
Query: 262 LKTSPQTQFESHSRPDLRSPQQLEREIIRQRGLVEGRRAASHPHLLDEPQSRPEASTPYS 441
L Q Q E R + P Q+++ + +E ++ ++ + EA P +
Sbjct: 3628 LSEPTQEQSEVSKRSEPVEPTQIQQAASEEETPLE----ETNETVVQTNEDVKEAEVPEN 3683
Query: 442 HDRSRRNSHANLLEATEENLHRTMKE 519
+ + ++L A E H + E
Sbjct: 3684 AEAQKVVDSSDLQVAASEIAHLAIDE 3709
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 31.5 bits (68), Expect = 0.70
Identities = 30/146 (20%), Positives = 56/146 (38%)
Frame = +1
Query: 82 PTKDATEPPSQIAGDVGVAPSTPTSGAWFRRPIPAVRTSGTKKRGVPTGHGREVYGQFTS 261
P ++A P+Q APS PT + P+ T K P+ +E + +
Sbjct: 3568 PKEEAPSEPTQEDVPKEAAPSEPTQENVPKEAAPSEPTKDVPKEAAPSEPIQEEVPKEAT 3627
Query: 262 LKTSPQTQFESHSRPDLRSPQQLEREIIRQRGLVEGRRAASHPHLLDEPQSRPEASTPYS 441
L Q Q E R + P Q+++ + +E ++ ++ + EA P +
Sbjct: 3628 LSEPTQEQSEVSKRSEPVEPTQIQQAASEEETPLE----ETNETVVQTNEDVKEAEVPEN 3683
Query: 442 HDRSRRNSHANLLEATEENLHRTMKE 519
+ + ++L A E H + E
Sbjct: 3684 AEAQKVVDSSDLQVAASEIAHLAIDE 3709
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 31.1 bits (67), Expect = 0.92
Identities = 35/149 (23%), Positives = 52/149 (34%), Gaps = 2/149 (1%)
Frame = +1
Query: 82 PTKDATEPPSQIAGDVGVAPSTPTSGAWFRRPIPAVRTSGTKKRGVPTGHGREVYGQFTS 261
PTK P DV +PT + TS TKK PT + T
Sbjct: 1634 PTKKEKSPEKSATEDV----KSPTKKEKSPEKVEEKPTSPTKKESSPTKKTDDEVKSPTK 1689
Query: 262 LKTSPQTQFESHSRPDL--RSPQQLEREIIRQRGLVEGRRAASHPHLLDEPQSRPEASTP 435
+ SPQT E + P +SP++ E ++ +A P + + PE S
Sbjct: 1690 KEKSPQTVEEKPASPTKKEKSPEKSVVEEVKSPKEKSPEKAEEKPKSPTKKEKSPEKSAA 1749
Query: 436 YSHDRSRRNSHANLLEATEENLHRTMKEN 522
+ + A E+ T KE+
Sbjct: 1750 EEVKSPTKKEKSPEKSAEEKPKSPTKKES 1778
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 31.1 bits (67), Expect = 0.92
Identities = 35/149 (23%), Positives = 52/149 (34%), Gaps = 2/149 (1%)
Frame = +1
Query: 82 PTKDATEPPSQIAGDVGVAPSTPTSGAWFRRPIPAVRTSGTKKRGVPTGHGREVYGQFTS 261
PTK P DV +PT + TS TKK PT + T
Sbjct: 1634 PTKKEKSPEKSATEDV----KSPTKKEKSPEKVEEKPTSPTKKESSPTKKTDDEVKSPTK 1689
Query: 262 LKTSPQTQFESHSRPDL--RSPQQLEREIIRQRGLVEGRRAASHPHLLDEPQSRPEASTP 435
+ SPQT E + P +SP++ E ++ +A P + + PE S
Sbjct: 1690 KEKSPQTVEEKPASPTKKEKSPEKSVVEEVKSPKEKSPEKAEEKPKSPTKKEKSPEKSAA 1749
Query: 436 YSHDRSRRNSHANLLEATEENLHRTMKEN 522
+ + A E+ T KE+
Sbjct: 1750 EEVKSPTKKEKSPEKSAEEKPKSPTKKES 1778
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 31.1 bits (67), Expect = 0.92
Identities = 35/149 (23%), Positives = 52/149 (34%), Gaps = 2/149 (1%)
Frame = +1
Query: 82 PTKDATEPPSQIAGDVGVAPSTPTSGAWFRRPIPAVRTSGTKKRGVPTGHGREVYGQFTS 261
PTK P DV +PT + TS TKK PT + T
Sbjct: 1634 PTKKEKSPEKSATEDV----KSPTKKEKSPEKVEEKPTSPTKKESSPTKKTDDEVKSPTK 1689
Query: 262 LKTSPQTQFESHSRPDL--RSPQQLEREIIRQRGLVEGRRAASHPHLLDEPQSRPEASTP 435
+ SPQT E + P +SP++ E ++ +A P + + PE S
Sbjct: 1690 KEKSPQTVEEKPASPTKKEKSPEKSVVEEVKSPKEKSPEKAEEKPKSPTKKEKSPEKSAA 1749
Query: 436 YSHDRSRRNSHANLLEATEENLHRTMKEN 522
+ + A E+ T KE+
Sbjct: 1750 EEVKSPTKKEKSPEKSAEEKPKSPTKKES 1778
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 31.1 bits (67), Expect = 0.92
Identities = 35/149 (23%), Positives = 52/149 (34%), Gaps = 2/149 (1%)
Frame = +1
Query: 82 PTKDATEPPSQIAGDVGVAPSTPTSGAWFRRPIPAVRTSGTKKRGVPTGHGREVYGQFTS 261
PTK P DV +PT + TS TKK PT + T
Sbjct: 1634 PTKKEKSPEKSATEDV----KSPTKKEKSPEKVEEKPTSPTKKESSPTKKTDDEVKSPTK 1689
Query: 262 LKTSPQTQFESHSRPDL--RSPQQLEREIIRQRGLVEGRRAASHPHLLDEPQSRPEASTP 435
+ SPQT E + P +SP++ E ++ +A P + + PE S
Sbjct: 1690 KEKSPQTVEEKPASPTKKEKSPEKSVVEEVKSPKEKSPEKAEEKPKSPTKKEKSPEKSAA 1749
Query: 436 YSHDRSRRNSHANLLEATEENLHRTMKEN 522
+ + A E+ T KE+
Sbjct: 1750 EEVKSPTKKEKSPEKSAEEKPKSPTKKES 1778
>AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical
protein Y47H9C.4c protein.
Length = 1045
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/25 (52%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Frame = -3
Query: 323 CGLRRSGLECDSNCVC-GLVFKDVN 252
C R GL+C NC C GL F D N
Sbjct: 321 CSRGRFGLQCKQNCTCPGLEFSDSN 345
>AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical
protein Y47H9C.4b protein.
Length = 1070
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/25 (52%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Frame = -3
Query: 323 CGLRRSGLECDSNCVC-GLVFKDVN 252
C R GL+C NC C GL F D N
Sbjct: 321 CSRGRFGLQCKQNCTCPGLEFSDSN 345
>AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical
protein Y47H9C.4a protein.
Length = 1111
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/25 (52%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Frame = -3
Query: 323 CGLRRSGLECDSNCVC-GLVFKDVN 252
C R GL+C NC C GL F D N
Sbjct: 321 CSRGRFGLQCKQNCTCPGLEFSDSN 345
>AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein.
Length = 1111
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/25 (52%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Frame = -3
Query: 323 CGLRRSGLECDSNCVC-GLVFKDVN 252
C R GL+C NC C GL F D N
Sbjct: 321 CSRGRFGLQCKQNCTCPGLEFSDSN 345
>Z81101-7|CAB03200.1| 613|Caenorhabditis elegans Hypothetical
protein F25B3.6 protein.
Length = 613
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +3
Query: 603 SIESQRIHENVYRRTPDSHNRRTPDSVGPKREDTLTTGQAANDENASQKSA 755
S ES E RR P + + + GPK L+T +A+D +A + A
Sbjct: 3 SSESASSDEETKRRAPATSDSDSDSDAGPKPGKPLSTDSSASDSDAEKPQA 53
>Z70752-6|CAA94759.1| 613|Caenorhabditis elegans Hypothetical
protein F25B3.6 protein.
Length = 613
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +3
Query: 603 SIESQRIHENVYRRTPDSHNRRTPDSVGPKREDTLTTGQAANDENASQKSA 755
S ES E RR P + + + GPK L+T +A+D +A + A
Sbjct: 3 SSESASSDEETKRRAPATSDSDSDSDAGPKPGKPLSTDSSASDSDAEKPQA 53
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.9 bits (64), Expect = 2.1
Identities = 25/87 (28%), Positives = 36/87 (41%)
Frame = +3
Query: 504 QNDERESDDGGFRARLAAQGRSSFEDRIRTSGRSIESQRIHENVYRRTPDSHNRRTPDSV 683
Q D R DD G R R + G D R R + +R R+P S +RRT S
Sbjct: 858 QIDRRRQDDMGARRR-SRWGDDDRRDDDRRDDRR-DDRRESRRRSPRSPRSPDRRTRRSP 915
Query: 684 GPKREDTLTTGQAANDENASQKSADSV 764
+RE+ + +E S + D +
Sbjct: 916 SYEREEPPVKKTSVEEETVSSTTLDEL 942
>AF003145-6|AAK68678.1| 1420|Caenorhabditis elegans Mtk1/mekk4 homolog
protein 1, isoformb protein.
Length = 1420
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/69 (24%), Positives = 37/69 (53%)
Frame = +1
Query: 448 RSRRNSHANLLEATEENLHRTMKENRMMEGSELD*LHKGGQVSKIESGRVVDL*NLSEYT 627
R+ R++ + ++ EN RT KEN+M++ EL+ ++ G+V+ N +
Sbjct: 1051 RNTRSTSSKTSSSSMENHKRTRKENQMLKLQELEDKRNRIDYDNLQIGKVITDDNRRNFV 1110
Query: 628 KMYTEERLT 654
+ T++++T
Sbjct: 1111 -LATDKKIT 1118
>AF003145-5|AAB57718.1| 1418|Caenorhabditis elegans Mtk1/mekk4 homolog
protein 1, isoforma protein.
Length = 1418
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/69 (24%), Positives = 37/69 (53%)
Frame = +1
Query: 448 RSRRNSHANLLEATEENLHRTMKENRMMEGSELD*LHKGGQVSKIESGRVVDL*NLSEYT 627
R+ R++ + ++ EN RT KEN+M++ EL+ ++ G+V+ N +
Sbjct: 1051 RNTRSTSSKTSSSSMENHKRTRKENQMLKLQELEDKRNRIDYDNLQIGKVITDDNRRNFV 1110
Query: 628 KMYTEERLT 654
+ T++++T
Sbjct: 1111 -LATDKKIT 1118
>Z73105-2|CAA97439.2| 803|Caenorhabditis elegans Hypothetical
protein R13.4 protein.
Length = 803
Score = 29.1 bits (62), Expect = 3.7
Identities = 22/101 (21%), Positives = 40/101 (39%), Gaps = 1/101 (0%)
Frame = +1
Query: 136 APSTPTSGAWFRRPIPAVRTSGTKKRGVPTGHGREVY-GQFTSLKTSPQTQFESHSRPDL 312
+P++ W + +P + T G+ +P G G + GQ P Q+ +
Sbjct: 162 SPNSSDGSMWPPQGVP-MSTPGSSAGHMPLGAGAASFPGQMNGPPQHPGMQYSGQMQQLP 220
Query: 313 RSPQQLEREIIRQRGLVEGRRAASHPHLLDEPQSRPEASTP 435
+ + QR + G+RAA P ++ + P TP
Sbjct: 221 YGQMEGNHAMYDQR--IMGQRAAGRPGMMPDYPQMPMGQTP 259
>Z66497-4|CAA91284.1| 401|Caenorhabditis elegans Hypothetical
protein K08F8.2 protein.
Length = 401
Score = 29.1 bits (62), Expect = 3.7
Identities = 31/110 (28%), Positives = 46/110 (41%), Gaps = 6/110 (5%)
Frame = +1
Query: 106 PSQIAGDVGVAPSTPTSGAWFRRPIPAV---RT---SGTKKRGVPTGHGREVYGQFTSLK 267
P + V PS ++ RRP P V RT SG TG+ + +S
Sbjct: 253 PQPVIQAVQQGPSLLSALLSQRRPSPTVPQSRTEHISGLNSPPRHTGNKSDCESVSSSAS 312
Query: 268 TSPQTQFESHSRPDLRSPQQLEREIIRQRGLVEGRRAASHPHLLDEPQSR 417
SP E HS +SPQ ++R R+R +R ++ + E +SR
Sbjct: 313 FSPSHSSEDHSNYSNKSPQYVDR---RRRNNEAAKRCRANRRAVFEYRSR 359
>U41535-6|AAK67248.1| 482|Caenorhabditis elegans Lin-26 related
protein 2, isoform b protein.
Length = 482
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +1
Query: 259 SLKTSPQTQFESHSRPDLRSPQQLER 336
S+ SPQ Q+ SH D+ SPQ+L+R
Sbjct: 201 SVLPSPQNQYLSHLIVDVSSPQELKR 226
>U41535-5|AAK67252.1| 548|Caenorhabditis elegans Lin-26 related
protein 2, isoform a protein.
Length = 548
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +1
Query: 259 SLKTSPQTQFESHSRPDLRSPQQLER 336
S+ SPQ Q+ SH D+ SPQ+L+R
Sbjct: 267 SVLPSPQNQYLSHLIVDVSSPQELKR 292
>AJ130960-1|CAA10264.1| 482|Caenorhabditis elegans LIR-2B protein
protein.
Length = 482
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +1
Query: 259 SLKTSPQTQFESHSRPDLRSPQQLER 336
S+ SPQ Q+ SH D+ SPQ+L+R
Sbjct: 201 SVLPSPQNQYLSHLIVDVSSPQELKR 226
>AJ130959-1|CAA10263.1| 548|Caenorhabditis elegans LIR-2A protein
protein.
Length = 548
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +1
Query: 259 SLKTSPQTQFESHSRPDLRSPQQLER 336
S+ SPQ Q+ SH D+ SPQ+L+R
Sbjct: 267 SVLPSPQNQYLSHLIVDVSSPQELKR 292
>Z81070-11|CAB03006.3| 1086|Caenorhabditis elegans Hypothetical
protein F26E4.10 protein.
Length = 1086
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = -1
Query: 733 SSFAACPVVKVSSRFGPTESGVLRLWLSGVLLYTFS 626
S +CP++ + RF T+ +++LW S +L F+
Sbjct: 410 SDVESCPMIHIMPRFVQTKDDLVQLWSSKTVLAYFT 445
>AF160248-1|AAD45518.1| 860|Caenorhabditis elegans ribonuclease
protein.
Length = 860
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = -1
Query: 733 SSFAACPVVKVSSRFGPTESGVLRLWLSGVLLYTFS 626
S +CP++ + RF T+ +++LW S +L F+
Sbjct: 184 SDVESCPMIHIMPRFVQTKDDLVQLWSSKTVLAYFT 219
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 28.3 bits (60), Expect = 6.5
Identities = 18/59 (30%), Positives = 32/59 (54%)
Frame = +1
Query: 322 QQLEREIIRQRGLVEGRRAASHPHLLDEPQSRPEASTPYSHDRSRRNSHANLLEATEEN 498
+Q +++ IR++ L +R A DE + EA+ +R+RRN+ A +E E+N
Sbjct: 1673 EQRQKDEIREQFLASEKRNAILQSEKDELAQQAEAA-----ERARRNAEAECIELREQN 1726
>Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical
protein ZK863.7 protein.
Length = 305
Score = 28.3 bits (60), Expect = 6.5
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +2
Query: 110 ARSQEMLASPHRPQPQALGSDALYQQYGPPGRRSAVYQRDMDVRSM-ANSH 259
A + + P PQP ALYQ+Y R+ VY RD ++ M A H
Sbjct: 140 AYGAQSVVEPEIPQPMDPDLQALYQEY-QLSRQRYVYYRDRLLKEMEAKQH 189
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 28.3 bits (60), Expect = 6.5
Identities = 18/59 (30%), Positives = 32/59 (54%)
Frame = +1
Query: 322 QQLEREIIRQRGLVEGRRAASHPHLLDEPQSRPEASTPYSHDRSRRNSHANLLEATEEN 498
+Q +++ IR++ L +R A DE + EA+ +R+RRN+ A +E E+N
Sbjct: 1673 EQRQKDEIREQFLASEKRNAILQSEKDELAQQAEAA-----ERARRNAEAECIELREQN 1726
>U49956-4|AAK77620.1| 1117|Caenorhabditis elegans Variable abnormal
morphology protein1, isoform a protein.
Length = 1117
Score = 28.3 bits (60), Expect = 6.5
Identities = 18/54 (33%), Positives = 22/54 (40%)
Frame = +1
Query: 187 VRTSGTKKRGVPTGHGREVYGQFTSLKTSPQTQFESHSRPDLRSPQQLEREIIR 348
VR + KKR T H Y F L QF R DLR Q + ++ R
Sbjct: 483 VRPAIVKKRTFETRHVNMTYTTFIGLNPETVYQFRVRIRDDLRWSQPISYQLGR 536
>U49956-3|AAK77621.1| 1122|Caenorhabditis elegans Variable abnormal
morphology protein1, isoform b protein.
Length = 1122
Score = 28.3 bits (60), Expect = 6.5
Identities = 18/54 (33%), Positives = 22/54 (40%)
Frame = +1
Query: 187 VRTSGTKKRGVPTGHGREVYGQFTSLKTSPQTQFESHSRPDLRSPQQLEREIIR 348
VR + KKR T H Y F L QF R DLR Q + ++ R
Sbjct: 483 VRPAIVKKRTFETRHVNMTYTTFIGLNPETVYQFRVRIRDDLRWSQPISYQLGR 536
>U41994-13|AAK31527.2| 1425|Caenorhabditis elegans Neuronal symmetry
protein 1 protein.
Length = 1425
Score = 28.3 bits (60), Expect = 6.5
Identities = 19/82 (23%), Positives = 34/82 (41%)
Frame = +1
Query: 259 SLKTSPQTQFESHSRPDLRSPQQLEREIIRQRGLVEGRRAASHPHLLDEPQSRPEASTPY 438
S+ P T+ E + + + + +RE++R + G EP S + +
Sbjct: 939 SINKKPATKIELNHDKEKKEKSKNQREMLRSTSHIGGMGVVERSPPTPEPMS-ATLTAGF 997
Query: 439 SHDRSRRNSHANLLEATEENLH 504
SH S+ S+A E+ LH
Sbjct: 998 SHVHSQTVSNALSTAREEKKLH 1019
>U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein.
Length = 305
Score = 28.3 bits (60), Expect = 6.5
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +2
Query: 110 ARSQEMLASPHRPQPQALGSDALYQQYGPPGRRSAVYQRDMDVRSM-ANSH 259
A + + P PQP ALYQ+Y R+ VY RD ++ M A H
Sbjct: 140 AYGAQSVVEPEIPQPMDPDLQALYQEY-QLSRQRYVYYRDRLLKEMEAKQH 189
>AF040269-1|AAC38970.1| 1122|Caenorhabditis elegans Eph receptor
tyrosine kinase protein.
Length = 1122
Score = 28.3 bits (60), Expect = 6.5
Identities = 18/54 (33%), Positives = 22/54 (40%)
Frame = +1
Query: 187 VRTSGTKKRGVPTGHGREVYGQFTSLKTSPQTQFESHSRPDLRSPQQLEREIIR 348
VR + KKR T H Y F L QF R DLR Q + ++ R
Sbjct: 483 VRPAIVKKRTFETRHVNMTYTTFIGLNPETVYQFRVRIRDDLRWSQPISYQLGR 536
>AC024763-10|AAK93862.2| 598|Caenorhabditis elegans Hypothetical
protein Y39A3CL.1 protein.
Length = 598
Score = 28.3 bits (60), Expect = 6.5
Identities = 18/68 (26%), Positives = 28/68 (41%)
Frame = -3
Query: 233 PCPVGTPRFFVPEVRTAGIGRRNQAPEVGVDGATPTSPAIWLGGSVASFVGRFAVALVAY 54
P +GTPRF + E+ A + E G D PAI + +V R ++
Sbjct: 349 PSAIGTPRFVIAEITDAKARKLQALTEAG-DIKFVAEPAIVINFRGVLYVPRLPKSVFRL 407
Query: 53 AAMDLDTP 30
+ D+ P
Sbjct: 408 RSSDMPIP 415
>Z46266-16|CAD44094.1| 1088|Caenorhabditis elegans Hypothetical
protein ZK899.8h protein.
Length = 1088
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = +1
Query: 412 SRPEASTPYSHDRSRRNSHANLLEATEENLHRTMKENRMMEGSEL 546
SRP S P +S +L EA + +LHR N S L
Sbjct: 133 SRPFRSNPLKRTKSVSKMEKSLAEANQHSLHRVDASNTPSRDSSL 177
>Z46266-14|CAA86419.1| 1048|Caenorhabditis elegans Hypothetical
protein ZK899.8e protein.
Length = 1048
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = +1
Query: 412 SRPEASTPYSHDRSRRNSHANLLEATEENLHRTMKENRMMEGSEL 546
SRP S P +S +L EA + +LHR N S L
Sbjct: 93 SRPFRSNPLKRTKSVSKMEKSLAEANQHSLHRVDASNTPSRDSSL 137
>Z46266-13|CAA86418.1| 1137|Caenorhabditis elegans Hypothetical
protein ZK899.8d protein.
Length = 1137
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = +1
Query: 412 SRPEASTPYSHDRSRRNSHANLLEATEENLHRTMKENRMMEGSEL 546
SRP S P +S +L EA + +LHR N S L
Sbjct: 182 SRPFRSNPLKRTKSVSKMEKSLAEANQHSLHRVDASNTPSRDSSL 226
>Z46266-12|CAA86415.1| 1259|Caenorhabditis elegans Hypothetical
protein ZK899.8c protein.
Length = 1259
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = +1
Query: 412 SRPEASTPYSHDRSRRNSHANLLEATEENLHRTMKENRMMEGSEL 546
SRP S P +S +L EA + +LHR N S L
Sbjct: 304 SRPFRSNPLKRTKSVSKMEKSLAEANQHSLHRVDASNTPSRDSSL 348
>Z46266-11|CAA86417.1| 1170|Caenorhabditis elegans Hypothetical
protein ZK899.8b protein.
Length = 1170
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = +1
Query: 412 SRPEASTPYSHDRSRRNSHANLLEATEENLHRTMKENRMMEGSEL 546
SRP S P +S +L EA + +LHR N S L
Sbjct: 215 SRPFRSNPLKRTKSVSKMEKSLAEANQHSLHRVDASNTPSRDSSL 259
>Z46266-10|CAA86416.1| 1207|Caenorhabditis elegans Hypothetical
protein ZK899.8a protein.
Length = 1207
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = +1
Query: 412 SRPEASTPYSHDRSRRNSHANLLEATEENLHRTMKENRMMEGSEL 546
SRP S P +S +L EA + +LHR N S L
Sbjct: 252 SRPFRSNPLKRTKSVSKMEKSLAEANQHSLHRVDASNTPSRDSSL 296
>Z37979-7|CAD44150.1| 1088|Caenorhabditis elegans Hypothetical
protein ZK899.8h protein.
Length = 1088
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = +1
Query: 412 SRPEASTPYSHDRSRRNSHANLLEATEENLHRTMKENRMMEGSEL 546
SRP S P +S +L EA + +LHR N S L
Sbjct: 133 SRPFRSNPLKRTKSVSKMEKSLAEANQHSLHRVDASNTPSRDSSL 177
>Z37979-5|CAA86037.1| 1048|Caenorhabditis elegans Hypothetical
protein ZK899.8e protein.
Length = 1048
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = +1
Query: 412 SRPEASTPYSHDRSRRNSHANLLEATEENLHRTMKENRMMEGSEL 546
SRP S P +S +L EA + +LHR N S L
Sbjct: 93 SRPFRSNPLKRTKSVSKMEKSLAEANQHSLHRVDASNTPSRDSSL 137
>Z37979-4|CAA86036.1| 1137|Caenorhabditis elegans Hypothetical
protein ZK899.8d protein.
Length = 1137
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = +1
Query: 412 SRPEASTPYSHDRSRRNSHANLLEATEENLHRTMKENRMMEGSEL 546
SRP S P +S +L EA + +LHR N S L
Sbjct: 182 SRPFRSNPLKRTKSVSKMEKSLAEANQHSLHRVDASNTPSRDSSL 226
>Z37979-3|CAA86033.1| 1259|Caenorhabditis elegans Hypothetical
protein ZK899.8c protein.
Length = 1259
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = +1
Query: 412 SRPEASTPYSHDRSRRNSHANLLEATEENLHRTMKENRMMEGSEL 546
SRP S P +S +L EA + +LHR N S L
Sbjct: 304 SRPFRSNPLKRTKSVSKMEKSLAEANQHSLHRVDASNTPSRDSSL 348
>Z37979-2|CAA86035.1| 1170|Caenorhabditis elegans Hypothetical
protein ZK899.8b protein.
Length = 1170
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = +1
Query: 412 SRPEASTPYSHDRSRRNSHANLLEATEENLHRTMKENRMMEGSEL 546
SRP S P +S +L EA + +LHR N S L
Sbjct: 215 SRPFRSNPLKRTKSVSKMEKSLAEANQHSLHRVDASNTPSRDSSL 259
>Z37979-1|CAA86034.1| 1207|Caenorhabditis elegans Hypothetical
protein ZK899.8a protein.
Length = 1207
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = +1
Query: 412 SRPEASTPYSHDRSRRNSHANLLEATEENLHRTMKENRMMEGSEL 546
SRP S P +S +L EA + +LHR N S L
Sbjct: 252 SRPFRSNPLKRTKSVSKMEKSLAEANQHSLHRVDASNTPSRDSSL 296
>Z37140-8|CAA85503.1| 1207|Caenorhabditis elegans Hypothetical
protein ZK899.8a protein.
Length = 1207
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = +1
Query: 412 SRPEASTPYSHDRSRRNSHANLLEATEENLHRTMKENRMMEGSEL 546
SRP S P +S +L EA + +LHR N S L
Sbjct: 252 SRPFRSNPLKRTKSVSKMEKSLAEANQHSLHRVDASNTPSRDSSL 296
>U46673-4|AAC48152.2| 1535|Caenorhabditis elegans Laminin related.
see also lmb-protein 2 protein.
Length = 1535
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = -3
Query: 389 GCDAARLPSTNPRCRMISRSNCCGLRRSGLECD 291
GC+ + + PRC S S C L G +CD
Sbjct: 436 GCETSGSLNNQPRCDSSSGSCSCKLNVEGRQCD 468
>AB011282-1|BAA24962.1| 210|Caenorhabditis elegans GAP-2-6 protein.
Length = 210
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = +1
Query: 412 SRPEASTPYSHDRSRRNSHANLLEATEENLHRTMKENRMMEGSEL 546
SRP S P +S +L EA + +LHR N S L
Sbjct: 55 SRPFRSNPLKRTKSVSKMEKSLAEANQHSLHRVDASNTPSRDSSL 99
>AB011281-1|BAA24961.1| 254|Caenorhabditis elegans GAP-2-5 protein.
Length = 254
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = +1
Query: 412 SRPEASTPYSHDRSRRNSHANLLEATEENLHRTMKENRMMEGSEL 546
SRP S P +S +L EA + +LHR N S L
Sbjct: 93 SRPFRSNPLKRTKSVSKMEKSLAEANQHSLHRVDASNTPSRDSSL 137
>AB011280-1|BAA24960.1| 1120|Caenorhabditis elegans GAP-2-4 protein.
Length = 1120
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = +1
Query: 412 SRPEASTPYSHDRSRRNSHANLLEATEENLHRTMKENRMMEGSEL 546
SRP S P +S +L EA + +LHR N S L
Sbjct: 182 SRPFRSNPLKRTKSVSKMEKSLAEANQHSLHRVDASNTPSRDSSL 226
>AB011279-1|BAA24959.1| 594|Caenorhabditis elegans GAP-2-3 protein.
Length = 594
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = +1
Query: 412 SRPEASTPYSHDRSRRNSHANLLEATEENLHRTMKENRMMEGSEL 546
SRP S P +S +L EA + +LHR N S L
Sbjct: 304 SRPFRSNPLKRTKSVSKMEKSLAEANQHSLHRVDASNTPSRDSSL 348
>AB011278-1|BAA24958.1| 280|Caenorhabditis elegans GAP-2-2 protein.
Length = 280
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = +1
Query: 412 SRPEASTPYSHDRSRRNSHANLLEATEENLHRTMKENRMMEGSEL 546
SRP S P +S +L EA + +LHR N S L
Sbjct: 215 SRPFRSNPLKRTKSVSKMEKSLAEANQHSLHRVDASNTPSRDSSL 259
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,436,903
Number of Sequences: 27780
Number of extensions: 372448
Number of successful extensions: 1295
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 1190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1294
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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