Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0133
         (696 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    23   1.8  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       22   4.2  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   4.2  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   4.2  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   7.3  

>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +3

Query: 288 CSDTK*GMLKIPLGLFVNQPLNVIIFPDK 374
           C D K  M+  P GL  N    +  +PD+
Sbjct: 128 CVDGKYNMITCPNGLVYNDKAGICSWPDE 156


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 340 LTNNPKGIFNMPYLVSEHFRID 275
           +TN  KG++NM  L   H R D
Sbjct: 449 VTNEIKGVYNMTNLKFYHRRDD 470


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +1

Query: 88  IPLI*ASCSLISWRRSIGLMTLRQYQL 168
           + LI  S  +ISW   IG+M L QY L
Sbjct: 174 LTLITYSLCVISWAVGIGIM-LAQYYL 199


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +1

Query: 88  IPLI*ASCSLISWRRSIGLMTLRQYQL 168
           + LI  S  +ISW   IG+M L QY L
Sbjct: 174 LTLITYSLCVISWAVGIGIM-LAQYYL 199


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 516 EQFKKNNPSFF 548
           EQ+K+ NPS F
Sbjct: 122 EQYKRENPSIF 132


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,800
Number of Sequences: 336
Number of extensions: 3613
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)