Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0133
         (696 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0056 + 11751585-11751672,11751741-11752060,11755363-117554...    32   0.38 
05_06_0250 - 26682207-26683811                                         29   3.5  
05_07_0260 - 28739035-28739085,28739316-28739596,28740545-287405...    28   6.2  
03_06_0594 + 34950892-34951167,34952241-34952366,34952707-349530...    28   8.1  
01_06_0537 + 30073020-30074471,30074957-30074980                       28   8.1  

>08_02_0056 +
           11751585-11751672,11751741-11752060,11755363-11755483,
           11755950-11756137,11756224-11756355,11756535-11756577,
           11757298-11757395
          Length = 329

 Score = 32.3 bits (70), Expect = 0.38
 Identities = 11/28 (39%), Positives = 21/28 (75%)
 Frame = -2

Query: 158 CLKVISPIDLRHEINEQLAQIKGIISKF 75
           CL++ +P+D    I+ QLAQ +G+++K+
Sbjct: 90  CLRIATPVDQLPRIDAQLAQSQGVVAKY 117


>05_06_0250 - 26682207-26683811
          Length = 534

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 10/37 (27%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = +3

Query: 27  RIPHYHHT--FPWDYKTAELGDYSLNLSKLFIDFMAK 131
           R  H HH+   PW     ++ +Y+  +++LF++F  +
Sbjct: 343 RYKHDHHSTSMPWGMNLMQIAEYTPEITELFLEFTGR 379


>05_07_0260 -
           28739035-28739085,28739316-28739596,28740545-28740572,
           28740653-28740749,28741216-28741272,28741353-28741415,
           28741533-28741621,28741779-28741865,28742041-28742162,
           28742245-28742500,28742595-28742744,28743120-28743278,
           28743820-28743892,28743968-28744024,28744115-28744243,
           28744469-28744560,28745220-28745252
          Length = 607

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +3

Query: 18  ARRRIPHYHHTFPWDYKTAELGDYS 92
           A R +P++  T+PW+Y  A +  Y+
Sbjct: 583 AHRLLPNFQRTYPWEYDVAYIVVYA 607


>03_06_0594 +
           34950892-34951167,34952241-34952366,34952707-34953018,
           34954005-34954133,34954259-34954660
          Length = 414

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
 Frame = +1

Query: 31  FHTTITRSRGITKPPNLEIIPLI*ASCSLISWRRSIGLMT-LRQYQLTSFRNERKGQVME 207
           F  TIT   G    P+L + P++ AS +++S ++ +   T   Q  + S    + G+   
Sbjct: 193 FTATITGKGGHAAEPHLAVDPIVAASSAVLSLQQIVARETNPLQGAVVSVTTIKGGEAFN 252

Query: 208 AIPYGDTMLG 237
            IP   T+ G
Sbjct: 253 VIPESVTLGG 262


>01_06_0537 + 30073020-30074471,30074957-30074980
          Length = 491

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 14/46 (30%), Positives = 25/46 (54%)
 Frame = -2

Query: 197 CPFRSFLNDVS*YCLKVISPIDLRHEINEQLAQIKGIISKFGGFVI 60
           CP + F   +S    K++S +  + E+ E L  ++GI+S    FV+
Sbjct: 107 CPLKRFC--ISTRTWKILSQVLEKKELQEMLDHLQGIVSDMQEFVV 150


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,640,035
Number of Sequences: 37544
Number of extensions: 311787
Number of successful extensions: 564
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 564
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1780264028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)