Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0133
         (696 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_25798| Best HMM Match : FA_desaturase (HMM E-Value=0)               50   2e-06
SB_39021| Best HMM Match : M (HMM E-Value=5.3e-06)                     29   4.8  
SB_40951| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.3  

>SB_25798| Best HMM Match : FA_desaturase (HMM E-Value=0)
          Length = 268

 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 25/55 (45%), Positives = 31/55 (56%)
 Frame = +3

Query: 36  HYHHTFPWDYKTAELGDYSLNLSKLFIDFMAKIDWAYDLKTVSTDVIQKRTKRTG 200
           +YHHTFP DY  +E G   LN+S   ID  A +    D K V  + I+KR  RTG
Sbjct: 203 NYHHTFPQDYAASEFGT-RLNMSTRLIDMWAAMGLVSDRKVVPKETIRKRMMRTG 256


>SB_39021| Best HMM Match : M (HMM E-Value=5.3e-06)
          Length = 1691

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -2

Query: 263 YQFVFSSDLPNIVSPYGMASITCPFRSFLNDVS 165
           + F+ S D+P   SPY   ++ C  +    D+S
Sbjct: 814 HDFLMSGDIPQTTSPYFQVAVECTVKECSTDLS 846


>SB_40951| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 222

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -2

Query: 257 FVFSSDLPNIVSPYGMASITCPF 189
           + F   LP +V+P G+  +TCPF
Sbjct: 191 YKFLDRLPTLVAPGGIVVLTCPF 213


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,988,276
Number of Sequences: 59808
Number of extensions: 390726
Number of successful extensions: 703
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 651
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 702
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1817559367
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)