Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0133
(696 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82073-6|CAB04924.1| 333|Caenorhabditis elegans Hypothetical pr... 58 5e-09
AF260242-1|AAF97548.1| 333|Caenorhabditis elegans palmitoyl-CoA... 58 5e-09
Z95123-2|CAB08356.1| 339|Caenorhabditis elegans Hypothetical pr... 44 1e-04
AF260244-1|AAF97550.1| 339|Caenorhabditis elegans stearoyl-CoA ... 44 1e-04
AF260243-1|AAF97549.1| 338|Caenorhabditis elegans stearoyl-CoA ... 42 3e-04
AF022972-8|AAC48239.1| 338|Caenorhabditis elegans Fatty acid de... 42 3e-04
U53180-1|AAK68285.1| 492|Caenorhabditis elegans Hypothetical pr... 28 5.5
AF016447-10|AAG24008.1| 314|Caenorhabditis elegans Hypothetical... 28 5.5
AF016657-1|AAB93653.1| 361|Caenorhabditis elegans Hypothetical ... 27 9.7
>Z82073-6|CAB04924.1| 333|Caenorhabditis elegans Hypothetical
protein W06D12.3 protein.
Length = 333
Score = 58.4 bits (135), Expect = 5e-09
Identities = 26/55 (47%), Positives = 38/55 (69%)
Frame = +3
Query: 36 HYHHTFPWDYKTAELGDYSLNLSKLFIDFMAKIDWAYDLKTVSTDVIQKRTKRTG 200
+YHHTFP DY+T+E ++ LN +++ IDF A I YD KT +VIQ++ K+ G
Sbjct: 267 NYHHTFPQDYRTSEHAEF-LNWTRVLIDFGASIGMVYDRKTTPEEVIQRQCKKFG 320
>AF260242-1|AAF97548.1| 333|Caenorhabditis elegans palmitoyl-CoA
fatty acid desaturaseFAT-5 protein.
Length = 333
Score = 58.4 bits (135), Expect = 5e-09
Identities = 26/55 (47%), Positives = 38/55 (69%)
Frame = +3
Query: 36 HYHHTFPWDYKTAELGDYSLNLSKLFIDFMAKIDWAYDLKTVSTDVIQKRTKRTG 200
+YHHTFP DY+T+E ++ LN +++ IDF A I YD KT +VIQ++ K+ G
Sbjct: 267 NYHHTFPQDYRTSEHAEF-LNWTRVLIDFGASIGMVYDRKTTPEEVIQRQCKKFG 320
>Z95123-2|CAB08356.1| 339|Caenorhabditis elegans Hypothetical
protein VZK822L.1 protein.
Length = 339
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Frame = +3
Query: 36 HYHHTFPWDYKTAELGDYSL--NLSKLFIDFMAKIDWAYDLKTVSTDVIQKRTKRTG 200
++HHTFP DY+T+E YSL N +++ ID A + YD KT ++I ++ G
Sbjct: 276 NFHHTFPQDYRTSE---YSLKYNWTRVLIDTAAALGLVYDRKTACDEIIGRQVSNHG 329
>AF260244-1|AAF97550.1| 339|Caenorhabditis elegans stearoyl-CoA
desaturase FAT-6 protein.
Length = 339
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Frame = +3
Query: 36 HYHHTFPWDYKTAELGDYSL--NLSKLFIDFMAKIDWAYDLKTVSTDVIQKRTKRTG 200
++HHTFP DY+T+E YSL N +++ ID A + YD KT ++I ++ G
Sbjct: 276 NFHHTFPQDYRTSE---YSLKYNWTRVLIDTAAALGLVYDRKTACDEIIGRQVSNHG 329
>AF260243-1|AAF97549.1| 338|Caenorhabditis elegans stearoyl-CoA
desaturase FAT-7 protein.
Length = 338
Score = 42.3 bits (95), Expect = 3e-04
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Frame = +3
Query: 36 HYHHTFPWDYKTAELGDYSL--NLSKLFIDFMAKIDWAYDLKTVSTDVIQKRTKRTG 200
++HHTFP DY+ +E YSL N +++ ID A + YD KT++ + I ++ G
Sbjct: 275 NFHHTFPQDYRASE---YSLIYNWTRVLIDTAAVLGLVYDRKTIADEFISRQVANHG 328
>AF022972-8|AAC48239.1| 338|Caenorhabditis elegans Fatty acid
desaturase protein 7 protein.
Length = 338
Score = 42.3 bits (95), Expect = 3e-04
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Frame = +3
Query: 36 HYHHTFPWDYKTAELGDYSL--NLSKLFIDFMAKIDWAYDLKTVSTDVIQKRTKRTG 200
++HHTFP DY+ +E YSL N +++ ID A + YD KT++ + I ++ G
Sbjct: 275 NFHHTFPQDYRASE---YSLIYNWTRVLIDTAAVLGLVYDRKTIADEFISRQVANHG 328
>U53180-1|AAK68285.1| 492|Caenorhabditis elegans Hypothetical
protein D1014.7 protein.
Length = 492
Score = 28.3 bits (60), Expect = 5.5
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +3
Query: 96 NLSKLFIDFMAKIDWAYDLKTVSTDVIQKRTKRTGDGSHPVW 221
NL+K I+ ++ W YD+ V+ + QK K+ G S P W
Sbjct: 446 NLTKQIIN---RVKWVYDVIDVTCEEKQKIYKKHGGISAPCW 484
>AF016447-10|AAG24008.1| 314|Caenorhabditis elegans Hypothetical
protein C54F6.3 protein.
Length = 314
Score = 28.3 bits (60), Expect = 5.5
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +3
Query: 414 RDYLHQLFFFELICFLF 464
RDYLH+++FF+ + F F
Sbjct: 279 RDYLHKIYFFDYLVFQF 295
>AF016657-1|AAB93653.1| 361|Caenorhabditis elegans Hypothetical
protein C16C4.7 protein.
Length = 361
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +3
Query: 426 HQLFFFELICFLFPYFKQ--NIILFCVIKKLQEQFKKNNPSFFYAKAI 563
H + F +CF + +Q I LF + Q +F NP FF+ +I
Sbjct: 279 HLVLFVLFLCFYGEFRRQIRGISLFPSFIQYQPRFSPENPLFFFEASI 326
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,540,009
Number of Sequences: 27780
Number of extensions: 318900
Number of successful extensions: 686
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 682
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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