Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0131
         (749 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D55FBF Cluster: PREDICTED: similar to CG11063-PB...    58   2e-07
UniRef50_Q4E1L0 Cluster: Putative uncharacterized protein; n=3; ...    38   0.20 
UniRef50_A3BKG0 Cluster: Putative uncharacterized protein; n=1; ...    34   4.3  
UniRef50_Q11VU9 Cluster: Candidate bifunctional family GT51 b-gl...    33   5.7  
UniRef50_Q70T29 Cluster: Carboxyl methyltransferase; n=2; Magnol...    33   5.7  
UniRef50_Q54XD0 Cluster: 3,4-dihydroxy-5-hexaprenylbenzoate meth...    33   9.9  
UniRef50_Q16UN4 Cluster: Microtubule-associated protein; n=3; Eu...    33   9.9  

>UniRef50_UPI0000D55FBF Cluster: PREDICTED: similar to CG11063-PB;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG11063-PB - Tribolium castaneum
          Length = 594

 Score = 58.4 bits (135), Expect = 2e-07
 Identities = 40/96 (41%), Positives = 54/96 (56%), Gaps = 8/96 (8%)
 Frame = +3

Query: 219 RQKSSGRRNRELVLDNTQQNTRQDYSFYERSNVIASSKFATPKRVETIA--SINKRDINT 392
           +QKS G     +    TQQ +  DY+ YER+N+IASSK+ATPK+VET+    + + DI  
Sbjct: 49  KQKSMGAIESFVAEGPTQQKSN-DYTLYERNNIIASSKYATPKQVETLVQKQVEENDIYV 107

Query: 393 -TALP-----ASPTRSIDSLSQRSLSYQTDDLYEIP 482
             A P     ASPT S+   SQ S S +T    + P
Sbjct: 108 QCAKPQVPPNASPTHSLSGSSQHSGSPRTSMANQTP 143


>UniRef50_Q4E1L0 Cluster: Putative uncharacterized protein; n=3;
           Trypanosoma cruzi|Rep: Putative uncharacterized protein
           - Trypanosoma cruzi
          Length = 941

 Score = 38.3 bits (85), Expect = 0.20
 Identities = 25/76 (32%), Positives = 39/76 (51%)
 Frame = +3

Query: 240 RNRELVLDNTQQNTRQDYSFYERSNVIASSKFATPKRVETIASINKRDINTTALPASPTR 419
           R  +L   +T    R+ YSF E SNV+ + K A  + V+    +N  +  T+ L  SP+ 
Sbjct: 228 READLKDTHTSVGERKKYSFSEVSNVMNTGKIAGDRHVQEGEKVNGSNRATSHL-LSPSS 286

Query: 420 SIDSLSQRSLSYQTDD 467
           S  SLS  S+S+   +
Sbjct: 287 SFSSLSLSSVSFHRSE 302


>UniRef50_A3BKG0 Cluster: Putative uncharacterized protein; n=1;
           Oryza sativa (japonica cultivar-group)|Rep: Putative
           uncharacterized protein - Oryza sativa subsp. japonica
           (Rice)
          Length = 148

 Score = 33.9 bits (74), Expect = 4.3
 Identities = 24/74 (32%), Positives = 34/74 (45%)
 Frame = +1

Query: 46  LNKEKP*ILIIQTMDSSRRNNTDEQRCVLGLQDLKISKKVEDGTEQAQGATTSAPSPLGK 225
           +NKE P I      D  RR +    RC   +  L +S  V  G   A  A T++P P+G 
Sbjct: 9   MNKENPEIPTTFNPDPRRRVHWRNMRCANSVAYLSLSAFVMSGRAVASAAATASP-PVGV 67

Query: 226 SRPVGAIESLYSII 267
              V +  S +SI+
Sbjct: 68  QLTVTSEHSEWSIL 81


>UniRef50_Q11VU9 Cluster: Candidate bifunctional family GT51
           b-glycosyltransferase/PBP transpeptidase, candidate
           murein polymerase, Glycosyltransferase Family 51
           protein; n=2; Flexibacteraceae|Rep: Candidate
           bifunctional family GT51 b-glycosyltransferase/PBP
           transpeptidase, candidate murein polymerase,
           Glycosyltransferase Family 51 protein - Cytophaga
           hutchinsonii (strain ATCC 33406 / NCIMB 9469)
          Length = 774

 Score = 33.5 bits (73), Expect = 5.7
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = +3

Query: 60  TIDFNNSDHGFFKEKQYR*TTVCTWS 137
           T+D+N+  H FFK K+    TVCT+S
Sbjct: 573 TLDYNSQQHWFFKPKELGLRTVCTYS 598


>UniRef50_Q70T29 Cluster: Carboxyl methyltransferase; n=2;
           Magnoliophyta|Rep: Carboxyl methyltransferase - Bixa
           orellana (Lipstick tree)
          Length = 375

 Score = 33.5 bits (73), Expect = 5.7
 Identities = 15/48 (31%), Positives = 27/48 (56%)
 Frame = +3

Query: 417 RSIDSLSQRSLSYQTDDLYEIPGNPGAQYPPLFTKT*IITVNSVHHNH 560
           RS+D  +Q++ +   D++Y + G PG+ Y  LF    I  ++S +  H
Sbjct: 110 RSVDKFNQKAKAVDEDNIYFVSGVPGSFYNRLFPSESIHFIHSSYARH 157


>UniRef50_Q54XD0 Cluster: 3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; n=1; Dictyostelium discoideum
           AX4|Rep: 3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase - Dictyostelium discoideum AX4
          Length = 321

 Score = 32.7 bits (71), Expect = 9.9
 Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
 Frame = +3

Query: 225 KSSGRRNRELVLDNTQQNTRQDYSFYERSNVIASSKFATPKRVETIASINKRDINTTALP 404
           KS  R N+  +++N  ++ +Q    Y  S+   SSKF + K   T ++ N    NTT   
Sbjct: 8   KSCQRLNKPNLINNLIKSQKQSI-IYSSSSSSGSSKFISNKYFTTTSNSNNNSNNTTTTT 66

Query: 405 ASPTR--SIDSLSQRS 446
            +  R   ID  +Q+S
Sbjct: 67  TTTLRQDEIDFFNQQS 82


>UniRef50_Q16UN4 Cluster: Microtubule-associated protein; n=3;
           Eukaryota|Rep: Microtubule-associated protein - Aedes
           aegypti (Yellowfever mosquito)
          Length = 4478

 Score = 32.7 bits (71), Expect = 9.9
 Identities = 16/50 (32%), Positives = 29/50 (58%)
 Frame = +3

Query: 303 ERSNVIASSKFATPKRVETIASINKRDINTTALPASPTRSIDSLSQRSLS 452
           +++    SS  +TP   E   ++ KR I+TTA  A+ T  +D++ Q+ L+
Sbjct: 771 DKNGTTDSSLVSTPSADEAGIAVQKRIIDTTASAAAGTSDMDAIQQQQLA 820


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 702,130,192
Number of Sequences: 1657284
Number of extensions: 13663844
Number of successful extensions: 38531
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 37103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38524
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61734884250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)