Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0131
         (749 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   2.6  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    22   4.6  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    22   6.0  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    22   6.0  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    21   8.0  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    21   8.0  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -1

Query: 230 RLLPKGLGAEVVAPCACS 177
           RL+ +GLGAE + P  C+
Sbjct: 606 RLVARGLGAEAMWPVWCA 623


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +2

Query: 296 FL*TIKCDSFVQICDSQASRNYC 364
           FL  + CDS+++I   +  R +C
Sbjct: 16  FLFLLICDSYLKIYHKEKYRKFC 38


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 187 QGATTSAPSPLGKSRPVGA 243
           Q ATT AP+    S P G+
Sbjct: 25  QSATTEAPAAYSSSSPSGS 43


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 187 QGATTSAPSPLGKSRPVGA 243
           Q ATT AP+    S P G+
Sbjct: 25  QSATTEAPAAYSSSSPSGS 43


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 345 WESQIWTKLSHLIVH 301
           WE Q+W   SH+  H
Sbjct: 45  WEPQMWHHHSHMPPH 59


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 345 WESQIWTKLSHLIVH 301
           WE Q+W   SH+  H
Sbjct: 45  WEPQMWHHHSHMPPH 59


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,140
Number of Sequences: 336
Number of extensions: 3526
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)