Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0131
         (749 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0634 + 20125242-20125688                                         34   0.14 
09_04_0351 + 16904075-16904738,16906285-16906366,16906533-169066...    30   1.7  
11_05_0065 + 18766566-18766576,18767023-18767083,18767170-187672...    29   3.0  
08_02_0969 - 23126389-23126670,23126764-23126947,23127017-231278...    29   5.2  
04_03_0438 + 15929220-15929453,15929564-15929764,15930874-159310...    28   9.1  

>07_03_0634 + 20125242-20125688
          Length = 148

 Score = 33.9 bits (74), Expect = 0.14
 Identities = 24/74 (32%), Positives = 34/74 (45%)
 Frame = +1

Query: 46  LNKEKP*ILIIQTMDSSRRNNTDEQRCVLGLQDLKISKKVEDGTEQAQGATTSAPSPLGK 225
           +NKE P I      D  RR +    RC   +  L +S  V  G   A  A T++P P+G 
Sbjct: 9   MNKENPEIPTTFNPDPRRRVHWRNMRCANSVAYLSLSAFVMSGRAVASAAATASP-PVGV 67

Query: 226 SRPVGAIESLYSII 267
              V +  S +SI+
Sbjct: 68  QLTVTSEHSEWSIL 81


>09_04_0351 +
           16904075-16904738,16906285-16906366,16906533-16906697,
           16906811-16906929,16906930-16907156
          Length = 418

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = -1

Query: 239 PTGRLLPKGLGAEVVAPCACS 177
           P  R+LP GL   V  PCACS
Sbjct: 77  PADRILPAGLPLRVPVPCACS 97


>11_05_0065 +
           18766566-18766576,18767023-18767083,18767170-18767268,
           18767346-18767467,18767577-18767673,18767778-18767824,
           18768020-18768203,18768349-18768400,18768795-18768985,
           18769072-18770020,18770866-18771022,18771134-18771206,
           18771292-18771465,18771880-18771993,18772110-18772236,
           18772331-18772443,18772614-18772729,18772847-18773000
          Length = 946

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +3

Query: 279 TRQDYSFYERSNVIASSKFATPKRV-ETIASINKRDINTTALPASPT 416
           T  DY     ++  +S+ F   KRV ET+AS  K   N  A P+SP+
Sbjct: 266 TSNDYVLNAENSSGSSANFGCSKRVFETLASPTKTIKNMLAAPSSPS 312


>08_02_0969 -
           23126389-23126670,23126764-23126947,23127017-23127834,
           23127953-23128642
          Length = 657

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 22/80 (27%), Positives = 35/80 (43%)
 Frame = -1

Query: 680 GIALDFVLTGTAVELCCTECRSIRQTQEVVYPVGRAGDNMVVVVNAVHRNNLRFRKQGWV 501
           G+++       A  +    C       ++V+PV  AGD  V+ + A   N  R  K  WV
Sbjct: 129 GVSMHLWAPDIAERIISRTCTLETVETDLVHPVD-AGDTRVISLWAWTPNPSRIHKHVWV 187

Query: 500 LRTRVPRNFVKIVSLITQRP 441
           + TR  R+       I++RP
Sbjct: 188 MITRQIRDPQLESVTISERP 207


>04_03_0438 +
           15929220-15929453,15929564-15929764,15930874-15931046,
           15931131-15931233,15931763-15932107
          Length = 351

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 15/57 (26%), Positives = 32/57 (56%)
 Frame = +3

Query: 270 QQNTRQDYSFYERSNVIASSKFATPKRVETIASINKRDINTTALPASPTRSIDSLSQ 440
           Q+N  ++   +ER N +A+ K  TP ++  +A ++ +  +   +P   T  I++L+Q
Sbjct: 244 QENLEKNAEIFERVNAMAARKGCTPSQL-ALAWVHHQGSDVCPIPG--TTKIENLNQ 297


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,542,887
Number of Sequences: 37544
Number of extensions: 366891
Number of successful extensions: 935
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 935
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)