Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0130
         (705 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.4  
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       23   3.2  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    23   3.2  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    23   3.2  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    22   4.2  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    22   4.2  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           22   4.2  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    22   5.6  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    22   5.6  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    22   5.6  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   9.8  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 11/42 (26%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
 Frame = -2

Query: 266 CLFHGICNVSSIIQN--YYQALIYFRRHFVVAI*LEYTTVKL 147
           C++H  C       +  +  A I+F  H +  + L+Y T+ L
Sbjct: 165 CIYHFFCAFIIFTMHLLFCCAFIFFNMHLLFLLCLDYFTLHL 206


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -3

Query: 373 RSEQNYTHITVLSLTENFGFNN 308
           R  Q YT    L L + F FN+
Sbjct: 8   RGRQTYTRFQTLELEKEFHFNH 29


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -3

Query: 373 RSEQNYTHITVLSLTENFGFNN 308
           R  Q YT    L L + F FN+
Sbjct: 159 RGRQTYTRFQTLELEKEFHFNH 180


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -3

Query: 373 RSEQNYTHITVLSLTENFGFNN 308
           R  Q YT    L L + F FN+
Sbjct: 218 RGRQTYTRFQTLELEKEFHFNH 239


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -3

Query: 373 RSEQNYTHITVLSLTENFGFN 311
           R+ Q YT    L L + F FN
Sbjct: 185 RTRQTYTRYQTLELEKEFHFN 205


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -3

Query: 373 RSEQNYTHITVLSLTENFGFN 311
           R+ Q YT    L L + F FN
Sbjct: 185 RTRQTYTRYQTLELEKEFHFN 205


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -3

Query: 373 RSEQNYTHITVLSLTENFGFN 311
           R+ Q YT    L L + F FN
Sbjct: 185 RTRQTYTRYQTLELEKEFHFN 205


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 7/31 (22%)
 Frame = +3

Query: 204 DQGLIIILDNGRNVAN-------AMKKTKKA 275
           D G ++ILDN  ++ N       A+KKT  A
Sbjct: 62  DDGSLLILDNATDITNGGLQKVAALKKTNPA 92


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -3

Query: 373 RSEQNYTHITVLSLTENFGFN 311
           R  Q YT    L L + F FN
Sbjct: 244 RGRQTYTRYQTLELEKEFHFN 264


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -3

Query: 373 RSEQNYTHITVLSLTENFGFN 311
           R  Q YT    L L + F FN
Sbjct: 246 RGRQTYTRYQTLELEKEFHFN 266


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +2

Query: 2   FVAHASTQSNSVCT*ILKKIQSACPTSF 85
           F A +  Q+  VCT I    +  CP  F
Sbjct: 341 FCATSPCQNGGVCTTIHAGHKCTCPEGF 368


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,809
Number of Sequences: 336
Number of extensions: 3006
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)