Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0130
         (705 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50069-3|AAB37560.1|  359|Caenorhabditis elegans Hypothetical pr...    27   9.9  
U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical pr...    27   9.9  
AL032628-2|CAA21553.1|  247|Caenorhabditis elegans Hypothetical ...    27   9.9  

>U50069-3|AAB37560.1|  359|Caenorhabditis elegans Hypothetical
           protein C09B9.4 protein.
          Length = 359

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = -3

Query: 442 RADNNSICLNSPGACSYAVLRVLRSEQNYTHITVLSLTENFGF 314
           + ++ S CL       +AVLR L  +  +  +T    TENF +
Sbjct: 56  KVESQSKCLRPVLKLDHAVLRALGHQSGFPSLTSAGRTENFKY 98


>U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical protein
            F48E3.3 protein.
          Length = 1493

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = +3

Query: 618  YDHDEIQQVLNGFKADNLEVNVIGPN 695
            YD DEI++V++G  +DN   NVI  N
Sbjct: 1462 YD-DEIREVISGHSSDNPSDNVISEN 1486


>AL032628-2|CAA21553.1|  247|Caenorhabditis elegans Hypothetical
           protein Y38H6A.3 protein.
          Length = 247

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -3

Query: 454 VGVCRADNNSICLNSPGACSY 392
           +G CR D +SIC+   G C++
Sbjct: 88  IGQCRLDQDSICIALGGVCTH 108


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,445,773
Number of Sequences: 27780
Number of extensions: 277897
Number of successful extensions: 576
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 576
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)