Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0130
         (705 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    25   0.92 
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       22   4.9  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   8.6  

>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 24.6 bits (51), Expect = 0.92
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -2

Query: 305 ERHIHAPSHKSFFCLFHGICNVSSIIQNYYQ 213
           ER  +A  HK+F    HG  +V   ++  YQ
Sbjct: 602 ERMRYAAPHKAFTYRMHGYASVVGPVKGIYQ 632


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +3

Query: 645 LNGFKADNLEVNVIGPNL 698
           +N  K DN++VNV G N+
Sbjct: 174 INFDKYDNIQVNVSGDNV 191


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 7/17 (41%), Positives = 14/17 (82%)
 Frame = +2

Query: 359 ILLGSKNTKNSVRTSSW 409
           ILLG+K+ +  ++T++W
Sbjct: 110 ILLGAKDYQTFLKTAAW 126


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,880
Number of Sequences: 438
Number of extensions: 3383
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21683070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)