Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0128
         (685 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z37139-9|CAA85493.1|  396|Caenorhabditis elegans Hypothetical pr...   122   3e-28
Z46791-1|CAA86761.1|  476|Caenorhabditis elegans Hypothetical pr...    39   0.004
U39472-7|AAP86620.2|  339|Caenorhabditis elegans Serpentine rece...    27   9.4  
AL031634-3|CAA21036.1|  556|Caenorhabditis elegans Hypothetical ...    27   9.4  

>Z37139-9|CAA85493.1|  396|Caenorhabditis elegans Hypothetical
           protein C14B1.5 protein.
          Length = 396

 Score =  122 bits (293), Expect = 3e-28
 Identities = 51/83 (61%), Positives = 65/83 (78%)
 Frame = +2

Query: 263 LCDIIETFTEADTVIMGDVTYGACCIDDFTAVALGVDLLVHYGHSCLIPIDQTSSIKVLY 442
           + DI+E +T  DTVIMGDVTYGACC+DD+TA ++G DLLVHYGHSCL+PI  T  I +LY
Sbjct: 66  IADILEKYTGCDTVIMGDVTYGACCVDDYTAKSMGCDLLVHYGHSCLVPIQNTDGIAMLY 125

Query: 443 IFVDIKIDPSHFIETIKVNFPSK 511
           +FV+I I+ SH I+ +K NF  K
Sbjct: 126 VFVNIHINLSHLIDCVKENFQGK 148



 Score = 56.4 bits (130), Expect = 2e-08
 Identities = 24/35 (68%), Positives = 28/35 (80%)
 Frame = +3

Query: 150 LPENYNFEIHKTIWRIRSTAAKRVALQMPEGLTMF 254
           LP NY FE+ KTIW+IRST +K VALQ PEGL M+
Sbjct: 28  LPSNYTFEVPKTIWKIRSTESKYVALQFPEGLIMY 62



 Score = 53.6 bits (123), Expect = 1e-07
 Identities = 23/52 (44%), Positives = 36/52 (69%), Gaps = 2/52 (3%)
 Frame = +1

Query: 517 LALVSTIQFVTTLHSVAKNLRIEE--YMVTVPQTKPLSPGEILGCTAPKLPA 666
           L +VST+QF+ +L ++      ++    + +PQ KPLSPGE+LGCT+P+L A
Sbjct: 150 LVVVSTVQFIPSLQTLRTTFNKDDSSIRIDIPQCKPLSPGEVLGCTSPRLDA 201


>Z46791-1|CAA86761.1|  476|Caenorhabditis elegans Hypothetical
           protein C09G5.2 protein.
          Length = 476

 Score = 38.7 bits (86), Expect = 0.004
 Identities = 20/68 (29%), Positives = 33/68 (48%)
 Frame = +2

Query: 299 TVIMGDVTYGACCIDDFTAVALGVDLLVHYGHSCLIPIDQTSSIKVLYIFVDIKIDPSHF 478
           T ++ D +Y +CC+D+  A       LVH+G +C      T  I V Y+   + I    F
Sbjct: 90  TFVLADTSYRSCCVDEVAAAHADCTALVHFGEAC--HSAPTDKIDVKYVLGSMPI----F 143

Query: 479 IETIKVNF 502
           I+  ++ F
Sbjct: 144 IDQFRMEF 151


>U39472-7|AAP86620.2|  339|Caenorhabditis elegans Serpentine
           receptor, class a (alpha)protein 35 protein.
          Length = 339

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -1

Query: 196 ILHIVLCISKL*FSGKAAQALFSRGSFNKSS 104
           +  I +CI  L FSGKA + L+ R  F+ S+
Sbjct: 22  LFQISICILTLYFSGKAFKVLYRRSVFHIST 52


>AL031634-3|CAA21036.1|  556|Caenorhabditis elegans Hypothetical
           protein Y32B12C.3 protein.
          Length = 556

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = +2

Query: 248 YVSTTLCDIIETFTEADTVIMGDV-TYGACCIDDFTA 355
           Y ST     +E   E+ + I  +V TYG CC+D+ T+
Sbjct: 273 YYSTGYSSKLEEVNESLSKIYENVKTYGKCCVDEETS 309


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,898,559
Number of Sequences: 27780
Number of extensions: 339524
Number of successful extensions: 669
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 651
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 668
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)