Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0124
         (688 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           25   0.44 
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    22   5.4  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    22   5.4  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    22   5.4  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   9.5  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   9.5  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    21   9.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.5  

>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 25.4 bits (53), Expect = 0.44
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 5/47 (10%)
 Frame = -2

Query: 660 NSPPSKLPQRILLIPPR----TPAPEP-HGSDSKLSIFNALPKTVYH 535
           NSP      +ILL  P     + +P P H S+S  S  ++   T+YH
Sbjct: 179 NSPDQYQSYQILLPTPTCSEASSSPTPSHSSESSFSAASSYTNTIYH 225


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -3

Query: 50  FLFKYENRKRTNRYNL 3
           F+ KY NR+ T  YNL
Sbjct: 80  FICKYCNRQFTKSYNL 95


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -1

Query: 274 VKICHYLNLLCPPFMILFNFATSSV 200
           ++ CHYLN+L   + +L  +  + V
Sbjct: 196 LQYCHYLNILRVRYQLLNEYLETLV 220


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -1

Query: 274 VKICHYLNLLCPPFMILFNFATSSV 200
           ++ CHYLN+L   + +L  +  + V
Sbjct: 196 LQYCHYLNILRVRYQLLNEYLETLV 220


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 414 PTLL*PWKRRPNTWSIG 464
           PT+L     RP TW +G
Sbjct: 123 PTVLVEVNSRPETWVLG 139


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 414 PTLL*PWKRRPNTWSIG 464
           PT+L     RP TW +G
Sbjct: 123 PTVLVEVNSRPETWVLG 139


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 4/38 (10%)
 Frame = -2

Query: 645 KLPQRILLIPPRTPAPEPHGSD----SKLSIFNALPKT 544
           K P R + +PP+   P P  S      K+S+    P T
Sbjct: 63  KAPIRPVALPPKREIPSPKRSSPILAEKVSVSPTTPPT 100


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = -1

Query: 331 TKTSENGFSIIQSVSCQRMVKICHYLNLLCPPFMILF 221
           TK ++N  +  QSV   R+  + H+L+ L   F  +F
Sbjct: 560 TKLTKNCATKAQSVVLGRICTLHHHLSKLVTRFNEIF 596


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,019
Number of Sequences: 336
Number of extensions: 3710
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)