Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0124
         (688 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23172-11|AAL27245.1|  327|Caenorhabditis elegans Hypothetical p...    56   2e-08
U23172-10|AAM22066.1|  352|Caenorhabditis elegans Hypothetical p...    56   2e-08
U23172-9|AAK67227.1|  362|Caenorhabditis elegans Hypothetical pr...    56   2e-08
U23172-7|AAK67228.1|  376|Caenorhabditis elegans Hypothetical pr...    56   2e-08
AL161711-4|CAC44301.2|  301|Caenorhabditis elegans Hypothetical ...    40   0.001
Z95122-2|CAB08355.1|  363|Caenorhabditis elegans Hypothetical pr...    31   0.77 
Z48230-2|CAA88264.1|  363|Caenorhabditis elegans Hypothetical pr...    31   0.77 
AC006713-3|AAK68405.1|  291|Caenorhabditis elegans Hypothetical ...    28   7.2  
Z77663-10|CAB01204.1|  543|Caenorhabditis elegans Hypothetical p...    23   8.0  

>U23172-11|AAL27245.1|  327|Caenorhabditis elegans Hypothetical
           protein F25B5.3c protein.
          Length = 327

 Score = 56.0 bits (129), Expect = 2e-08
 Identities = 27/85 (31%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
 Frame = +2

Query: 257 IVTDFDHTLTRHTLDNGKSVLTSFGMFRE-CPSIPQHYKDEDVRLASIYKPIEADPVMTV 433
           +++DFD+TL+R   + G+ + T+ G+F +    +      + V L + Y PIE  P +T+
Sbjct: 67  VISDFDYTLSRFANEQGERLSTTHGVFDDNVMRLKPELGQKFVDLKNKYYPIEFSPNLTM 126

Query: 434 EEKTKHMVDWYIAAHALLKGVQFPR 508
           EEK  HM  W+  +H+L+   +F +
Sbjct: 127 EEKIPHMEKWWGTSHSLIVNEKFSK 151


>U23172-10|AAM22066.1|  352|Caenorhabditis elegans Hypothetical
           protein F25B5.3d protein.
          Length = 352

 Score = 56.0 bits (129), Expect = 2e-08
 Identities = 27/85 (31%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
 Frame = +2

Query: 257 IVTDFDHTLTRHTLDNGKSVLTSFGMFRE-CPSIPQHYKDEDVRLASIYKPIEADPVMTV 433
           +++DFD+TL+R   + G+ + T+ G+F +    +      + V L + Y PIE  P +T+
Sbjct: 92  VISDFDYTLSRFANEQGERLSTTHGVFDDNVMRLKPELGQKFVDLKNKYYPIEFSPNLTM 151

Query: 434 EEKTKHMVDWYIAAHALLKGVQFPR 508
           EEK  HM  W+  +H+L+   +F +
Sbjct: 152 EEKIPHMEKWWGTSHSLIVNEKFSK 176


>U23172-9|AAK67227.1|  362|Caenorhabditis elegans Hypothetical
           protein F25B5.3a protein.
          Length = 362

 Score = 56.0 bits (129), Expect = 2e-08
 Identities = 27/85 (31%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
 Frame = +2

Query: 257 IVTDFDHTLTRHTLDNGKSVLTSFGMFRE-CPSIPQHYKDEDVRLASIYKPIEADPVMTV 433
           +++DFD+TL+R   + G+ + T+ G+F +    +      + V L + Y PIE  P +T+
Sbjct: 102 VISDFDYTLSRFANEQGERLSTTHGVFDDNVMRLKPELGQKFVDLKNKYYPIEFSPNLTM 161

Query: 434 EEKTKHMVDWYIAAHALLKGVQFPR 508
           EEK  HM  W+  +H+L+   +F +
Sbjct: 162 EEKIPHMEKWWGTSHSLIVNEKFSK 186


>U23172-7|AAK67228.1|  376|Caenorhabditis elegans Hypothetical
           protein F25B5.3b protein.
          Length = 376

 Score = 56.0 bits (129), Expect = 2e-08
 Identities = 27/85 (31%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
 Frame = +2

Query: 257 IVTDFDHTLTRHTLDNGKSVLTSFGMFRE-CPSIPQHYKDEDVRLASIYKPIEADPVMTV 433
           +++DFD+TL+R   + G+ + T+ G+F +    +      + V L + Y PIE  P +T+
Sbjct: 116 VISDFDYTLSRFANEQGERLSTTHGVFDDNVMRLKPELGQKFVDLKNKYYPIEFSPNLTM 175

Query: 434 EEKTKHMVDWYIAAHALLKGVQFPR 508
           EEK  HM  W+  +H+L+   +F +
Sbjct: 176 EEKIPHMEKWWGTSHSLIVNEKFSK 200


>AL161711-4|CAC44301.2|  301|Caenorhabditis elegans Hypothetical
           protein Y10G11A.1 protein.
          Length = 301

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
 Frame = +2

Query: 248 QIEIVTDFDHTLTRHTLDNGKSVLTSFGMFRECPSIPQ-HYKDEDVRLASIYKPIEADPV 424
           Q+ +++DFD TL+R    +G    + + +F          +  + V L   Y PIE D  
Sbjct: 38  QLMVISDFDFTLSRFADKSGNRCSSCYCVFDSAVGTNNPEWCRKFVGLYHKYGPIEHDHS 97

Query: 425 MTVEEKTKHMVDWYIAAHALL 487
           +++EEK   M  W+  +H L+
Sbjct: 98  LSIEEKVPFMEAWWQQSHGLI 118


>Z95122-2|CAB08355.1|  363|Caenorhabditis elegans Hypothetical
           protein F42G10.2 protein.
          Length = 363

 Score = 31.1 bits (67), Expect = 0.77
 Identities = 16/47 (34%), Positives = 26/47 (55%)
 Frame = +3

Query: 369 KTRMSG*QVYISPSRPTLL*PWKRRPNTWSIGILLLMHYSKEYNFQE 509
           KT  +G Q Y++P R T    +  R + WS+GI L    + ++ +QE
Sbjct: 225 KTHDAGCQPYLAPERITSSDKYDVRSDVWSLGITLYEIATGKFPYQE 271


>Z48230-2|CAA88264.1|  363|Caenorhabditis elegans Hypothetical
           protein F42G10.2 protein.
          Length = 363

 Score = 31.1 bits (67), Expect = 0.77
 Identities = 16/47 (34%), Positives = 26/47 (55%)
 Frame = +3

Query: 369 KTRMSG*QVYISPSRPTLL*PWKRRPNTWSIGILLLMHYSKEYNFQE 509
           KT  +G Q Y++P R T    +  R + WS+GI L    + ++ +QE
Sbjct: 225 KTHDAGCQPYLAPERITSSDKYDVRSDVWSLGITLYEIATGKFPYQE 271


>AC006713-3|AAK68405.1|  291|Caenorhabditis elegans Hypothetical
           protein Y119D3A.2 protein.
          Length = 291

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
 Frame = -1

Query: 319 ENGFSIIQSVSCQRMVKICHYLN---LLCPPFMILFNFATSSVSSLIWMFSLLNS 164
           ++ F  I  +   +  KI H  N    LCPPF  LF F    V++  + FS+ N+
Sbjct: 170 DHQFEQITKLDQWKNTKILHLKNEAMKLCPPFKYLFQFTEFDVNA--FYFSIQNA 222


>Z77663-10|CAB01204.1|  543|Caenorhabditis elegans Hypothetical
           protein F53F4.11 protein.
          Length = 543

 Score = 23.4 bits (48), Expect(2) = 8.0
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -2

Query: 615 PRTPAPEPHGSDSKLSIFNALPKT 544
           P+TPAP+     +K ++    PKT
Sbjct: 53  PKTPAPKTPSRTTKSTVDTPAPKT 76



 Score = 22.6 bits (46), Expect(2) = 8.0
 Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 6/34 (17%)
 Frame = -2

Query: 675 RAVTKNSPPSKL----PQRI--LLIPPRTPAPEP 592
           R  TKN+P   +    P++   +++PP+TPA  P
Sbjct: 3   RKSTKNTPAKNVVADVPEKDEEVVVPPKTPARSP 36


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,273,370
Number of Sequences: 27780
Number of extensions: 350295
Number of successful extensions: 973
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 924
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 964
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)