Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0123
         (661 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q61CD5 Cluster: Putative uncharacterized protein CBG129...    34   2.6  
UniRef50_Q22BM5 Cluster: Putative uncharacterized protein; n=1; ...    34   2.6  

>UniRef50_Q61CD5 Cluster: Putative uncharacterized protein CBG12965;
           n=1; Caenorhabditis briggsae|Rep: Putative
           uncharacterized protein CBG12965 - Caenorhabditis
           briggsae
          Length = 293

 Score = 34.3 bits (75), Expect = 2.6
 Identities = 23/91 (25%), Positives = 47/91 (51%)
 Frame = -2

Query: 351 KIKLCINFVNSGQNIGKQKTKIKQNCALLTVFREKYW*YQTIPHINSVFEYFWKLYTFNA 172
           KI++ + FV  G+ +  +K ++    A L++F +K    Q +P++N  F  FWK+Y    
Sbjct: 89  KIQIHVCFV-PGRAL--KKNELWAVMAYLSLFYQKLHEEQWVPYMNQGFS-FWKIYWVTK 144

Query: 171 KRRFGIRRELLIKDYPRLHNKINTKYTGPRN 79
           K    + + + + D   +  ++N ++ G  N
Sbjct: 145 KCTRDVTQHIALLDGATILGEVNKRFCGMIN 175


>UniRef50_Q22BM5 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 553

 Score = 34.3 bits (75), Expect = 2.6
 Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
 Frame = +2

Query: 215 LICGIVWYHQYFSLNT-VKRAQFCFIFVFCL-PMF*PLLTKLIHNF 346
           +ICG VWY+ Y +LN    +   C+I    +  M  PLL+K + NF
Sbjct: 100 IICGAVWYYWYNNLNEHFTQGLACYILACIIESMCEPLLSKFVLNF 145


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 588,620,225
Number of Sequences: 1657284
Number of extensions: 10632637
Number of successful extensions: 25346
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 24650
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25342
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50000004659
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)