Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0122
(424 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0528 + 9189215-9189330,9190111-9190204,9190654-9190743,919... 51 4e-07
08_02_1261 + 25689487-25689666,25690642-25690887,25691032-256911... 40 8e-04
03_05_0843 + 28126480-28127007,28127092-28127457,28129388-281294... 36 0.018
08_01_0359 + 3152483-3152857,3154493-3154855,3155133-3155211,315... 35 0.023
11_01_0732 + 6065852-6066531,6067066-6067141,6067231-6067357,606... 33 0.13
12_01_1055 - 10861665-10861829,10862827-10863171,10864374-108646... 32 0.17
10_08_0877 + 21230447-21230815,21231855-21232208,21232417-212325... 31 0.38
05_04_0035 + 17378541-17381276 31 0.51
07_03_1567 - 27772815-27773302,27773471-27773561,27773641-277739... 30 0.88
10_01_0226 - 2401252-2401277,2403491-2403537,2404381-2405504 29 1.5
03_02_0695 + 10472174-10472286,10472390-10473239 29 1.5
05_03_0511 + 14907475-14907933,14907948-14908178,14908520-149088... 28 2.7
08_01_0654 - 5639419-5641449 28 3.6
03_05_0866 - 28370034-28371352,28371447-28371995,28372507-28373512 28 3.6
07_01_1156 - 10873223-10873417,10873498-10873579,10874235-108743... 27 4.7
01_06_1214 + 35470688-35471340,35471617-35471701,35471750-354719... 27 4.7
04_04_1395 + 33219711-33220629,33220750-33220787 27 6.2
10_08_0405 - 17657678-17658110,17658219-17659663,17659708-17660076 27 8.2
01_07_0291 + 42555233-42555444,42556515-42556550,42556652-425567... 27 8.2
01_06_1750 + 39651202-39651295,39651815-39651888,39653611-39653892 27 8.2
01_01_0508 + 3710435-3710980,3711086-3711238,3711323-3711408,371... 27 8.2
>03_02_0528 +
9189215-9189330,9190111-9190204,9190654-9190743,
9191601-9191717,9192187-9192259,9192335-9192453,
9192569-9192690,9192777-9192953,9193189-9193333,
9193458-9193636,9193742-9193991
Length = 493
Score = 50.8 bits (116), Expect = 4e-07
Identities = 27/67 (40%), Positives = 40/67 (59%)
Frame = +2
Query: 26 LSFVAEQVSHHPPISAFYAEHVNKRIQFEAWVWTKSKFLGLSIGVHNIGKGTVTLIDLGE 205
+SF+AEQVSHHPP+ A + E N ++ K+KFLG S+ V+ +G+ V+L G
Sbjct: 197 ISFIAEQVSHHPPMGAAHCE--NAHFTYDITSKLKTKFLGNSLEVYPLGRTRVSLKKSGV 254
Query: 206 EYTLTFP 226
+ L P
Sbjct: 255 KLELVPP 261
>08_02_1261 +
25689487-25689666,25690642-25690887,25691032-25691128,
25691233-25691630,25692013-25692267
Length = 391
Score = 39.9 bits (89), Expect = 8e-04
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Frame = +2
Query: 14 SPDQLSFVAEQVSHHPPISAFYAEHVNKRIQFEAWVWTKS---KFLGLSIGVHNIGKGTV 184
S L + EQVSH PP+SA +A + I+ VW ++ KF G S+ G V
Sbjct: 132 SSGSLHVLLEQVSHRPPVSALHATDDDGEIEL---VWCQNPIPKFHGTSVEATVKGMRHV 188
Query: 185 TLIDLGEEYTLTFPN 229
L+ E Y + PN
Sbjct: 189 KLLKFSENYEIDCPN 203
>03_05_0843 +
28126480-28127007,28127092-28127457,28129388-28129487,
28130266-28130546,28130643-28130705,28131276-28131431,
28131913-28132080,28132158-28132298,28132714-28132840,
28132888-28132994,28134142-28134372,28134446-28134559,
28135091-28135261
Length = 850
Score = 35.5 bits (78), Expect = 0.018
Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +2
Query: 17 PDQ-LSFVAEQVSHHPPISAFYAEHVNKRIQFEAWVWTKSKFLGLSIGVHNIGKGTVTLI 193
PD+ L F +E+VSHHP + A + E R F A KSKF G SI + +G T+
Sbjct: 488 PDKGLRFFSEKVSHHPMVVACHCEGTGWR--FWADSNLKSKFWGRSIQLDPVGVLTLEFD 545
Query: 194 DLGEEY 211
D GE +
Sbjct: 546 D-GEVF 550
>08_01_0359 +
3152483-3152857,3154493-3154855,3155133-3155211,
3155473-3155879,3156342-3156497,3156728-3156895,
3156991-3157131,3157739-3157966,3158063-3158176,
3158293-3158448
Length = 728
Score = 35.1 bits (77), Expect = 0.023
Identities = 25/55 (45%), Positives = 29/55 (52%)
Frame = +2
Query: 32 FVAEQVSHHPPISAFYAEHVNKRIQFEAWVWTKSKFLGLSIGVHNIGKGTVTLID 196
F AE+VSHHP + A + E K +F KSKF G SI V IG TV D
Sbjct: 456 FFAEKVSHHPMLIACHCE--GKGWKFWGDSNLKSKFWGQSIQVDPIGVLTVEFDD 508
>11_01_0732 +
6065852-6066531,6067066-6067141,6067231-6067357,
6068084-6068289
Length = 362
Score = 32.7 bits (71), Expect = 0.13
Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Frame = +1
Query: 124 DEEQIPRPVHRSPQHRQGHGHAHRSRRGVHFDI---PQWLRHININGP 258
D I RP +P HR GHGH H R I P WL + +N P
Sbjct: 31 DHGPIARP-QGAPHHRHGHGHGHHQRTSSESFIEEQPSWLDDL-LNEP 76
>12_01_1055 -
10861665-10861829,10862827-10863171,10864374-10864682,
10864813-10864968,10865669-10866117,10869275-10869359,
10869944-10870300,10870672-10871076
Length = 756
Score = 32.3 bits (70), Expect = 0.17
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +2
Query: 17 PDQ-LSFVAEQVSHHPPISAFYAEHVNKRIQFEAWVWTKSKFLGLSIGVHNIGKGTVTLI 193
PD+ L F +E+VSHHP + A + E + +F K KF G SI + IG T+
Sbjct: 474 PDKGLRFFSEKVSHHPMVVACHCE--GRGWKFWGDSNLKGKFWGRSIQLDPIGVLTLQFD 531
Query: 194 DLGEEY 211
D GE +
Sbjct: 532 D-GETF 536
>10_08_0877 +
21230447-21230815,21231855-21232208,21232417-21232504,
21232844-21233268,21233477-21233632,21233849-21234016,
21234170-21234310,21234393-21234629,21234710-21234823,
21235096-21235272
Length = 742
Score = 31.1 bits (67), Expect = 0.38
Identities = 23/62 (37%), Positives = 32/62 (51%)
Frame = +2
Query: 26 LSFVAEQVSHHPPISAFYAEHVNKRIQFEAWVWTKSKFLGLSIGVHNIGKGTVTLIDLGE 205
+ F +E+VSHHP + A + E K +F KSKF G SI + G T+ D GE
Sbjct: 458 IRFFSEKVSHHPMVMACHCE--GKGWKFWGDSNLKSKFWGQSIQLDPSGVLTLQFDD-GE 514
Query: 206 EY 211
+
Sbjct: 515 TF 516
>05_04_0035 + 17378541-17381276
Length = 911
Score = 30.7 bits (66), Expect = 0.51
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +1
Query: 67 IGVLRGARQQTHPVRSLGVDEEQIPRPVHRSPQHRQ-GHGHAHRSRRGVHFDIPQWLRHI 243
IG ++ + P G Q P+P+H +PQ +Q G+G +H G F+ PQ ++
Sbjct: 711 IGQVQQTDYSSGPPMQPGFGHPQPPQPMHSAPQTQQPGYGTSHPWHTG--FNAPQ-VQQP 767
Query: 244 NINGP 258
+ GP
Sbjct: 768 SYGGP 772
>07_03_1567 - 27772815-27773302,27773471-27773561,27773641-27773988,
27774929-27775110,27775191-27775368,27775453-27775605,
27775993-27776232,27776369-27776449,27776485-27776730,
27777151-27777240,27777536-27777778,27778365-27778529,
27779017-27779080,27779162-27779286,27779383-27779476,
27779647-27779714,27779798-27779989,27780618-27780752,
27780847-27780934,27781014-27781107,27781484-27781547,
27781657-27781708,27781911-27782014,27782099-27782158,
27782687-27782770,27782892-27783125,27783442-27783864,
27784675-27784736,27784867-27785521
Length = 1700
Score = 29.9 bits (64), Expect = 0.88
Identities = 18/69 (26%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +2
Query: 20 DQLSFVAEQVSHHP-PISAFYAEHVNKRIQFEAWV-WTKSKFLGLSIGVHNIGKGTVTLI 193
++L F+A +++ + P+ + + K+ Q+ A WT++ L +G+H G G I
Sbjct: 1293 EELQFLARRIARYKDPVRQYRIQAPYKKPQWSASCGWTETDDARLMVGIHWYGYGNWEKI 1352
Query: 194 DLGEEYTLT 220
L + +LT
Sbjct: 1353 RLDPKLSLT 1361
>10_01_0226 - 2401252-2401277,2403491-2403537,2404381-2405504
Length = 398
Score = 29.1 bits (62), Expect = 1.5
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Frame = -2
Query: 315 GFVAGLHALDD--HRAAQFDPRSVNI-DVP*PLGNVKVYSSPRSMSVTVPLPMLW-TPMD 148
G++ L L D H A+ +D R++ + D PL N ++ P+ + P+P++W +D
Sbjct: 310 GYILQLWTLRDYTHGASTWDLRNIVVLDALLPLRNARLPPPPQLPASAKPMPLVWLMALD 369
Query: 147 RPRNL 133
N+
Sbjct: 370 EDENV 374
>03_02_0695 + 10472174-10472286,10472390-10473239
Length = 320
Score = 29.1 bits (62), Expect = 1.5
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 7/47 (14%)
Frame = -1
Query: 175 LADVVDSYGQAEEFALRPHPGF---ELDAFVDVLR-VER---RYGRM 56
+AD+ D+ G+A AL PH GF ++ DV R VER RYGR+
Sbjct: 70 IADIDDAAGEALAAALGPHVGFVRCDVSVEEDVERAVERAVARYGRL 116
>05_03_0511 +
14907475-14907933,14907948-14908178,14908520-14908855,
14909571-14910126,14910217-14910424,14910519-14910885,
14910988-14911110
Length = 759
Score = 28.3 bits (60), Expect = 2.7
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +1
Query: 145 PVHRSPQHRQGHGHAHRSRRG 207
P+ R R+G GH HR RRG
Sbjct: 23 PLPRRADCRRGRGHGHRPRRG 43
>08_01_0654 - 5639419-5641449
Length = 676
Score = 27.9 bits (59), Expect = 3.6
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +2
Query: 155 GVHNIGKGTVTLIDLGEEYTL--TFPNGYGTSILTDRGSNWAALW 283
G + G GTV IDLG Y+ + NG+ I D+G+ W
Sbjct: 37 GAKSGGGGTVIGIDLGTTYSCVGVYRNGHVEIIANDQGNRITPSW 81
>03_05_0866 - 28370034-28371352,28371447-28371995,28372507-28373512
Length = 957
Score = 27.9 bits (59), Expect = 3.6
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = -2
Query: 324 LYVGFVAGLHALDDHRAAQFDPRSVNID 241
+++ + GLH L DH+A D +SV+++
Sbjct: 560 IHIEDIDGLHELPDHKAMTSDTKSVDLE 587
>07_01_1156 -
10873223-10873417,10873498-10873579,10874235-10874336,
10874456-10874553,10874692-10874778,10874869-10875317,
10875414-10875744,10875766-10875884,10875935-10876124,
10876319-10876657,10876735-10876875,10876958-10877440,
10877703-10877901,10879447-10879643
Length = 1003
Score = 27.5 bits (58), Expect = 4.7
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +1
Query: 145 PVHRSPQHRQGHGHAHRSRRGVHFD 219
P+H SPQH G+ GVH D
Sbjct: 355 PLHESPQHMLSIGYRQDVEEGVHDD 379
>01_06_1214 +
35470688-35471340,35471617-35471701,35471750-35471906,
35472086-35472189
Length = 332
Score = 27.5 bits (58), Expect = 4.7
Identities = 13/43 (30%), Positives = 18/43 (41%)
Frame = +1
Query: 52 PPSSHIGVLRGARQQTHPVRSLGVDEEQIPRPVHRSPQHRQGH 180
PP++ + + G R HP R L P P P+ R H
Sbjct: 14 PPTTGLNPIHGRRHGHHPSRLLASSAPPPPPPRPPKPEPRTSH 56
>04_04_1395 + 33219711-33220629,33220750-33220787
Length = 318
Score = 27.1 bits (57), Expect = 6.2
Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = -2
Query: 207 SSPRSM--SVTVPLPMLWT-PMDRPRNLLFVHTQASNWMRLLT 88
+ PR + S VP + W+ MDR +++ + T+ S W R ++
Sbjct: 228 ADPRKLADSTAVPTVLEWSLDMDRDQDMFWYDTRVSQWTRCVS 270
>10_08_0405 - 17657678-17658110,17658219-17659663,17659708-17660076
Length = 748
Score = 26.6 bits (56), Expect = 8.2
Identities = 10/23 (43%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Frame = -3
Query: 311 LWPVCTHS-MTTEPPSSIHGPLI 246
LW +CTH+ +T +PP H L+
Sbjct: 699 LWALCTHAGITRQPPPEQHDVLV 721
>01_07_0291 +
42555233-42555444,42556515-42556550,42556652-42556796,
42556885-42556938,42557130-42557260,42557830-42558056,
42558670-42558846,42558928-42559076
Length = 376
Score = 26.6 bits (56), Expect = 8.2
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +1
Query: 28 VVRGRASVPPSSHIGVLRGARQQTHPVRSLGVDEEQIPRPVHRS 159
++R S P SSH+ + R P R+ V PRP R+
Sbjct: 18 LIRLSPSPPASSHVPLPRSPASSARPRRASSVSLSTAPRPRARA 61
>01_06_1750 + 39651202-39651295,39651815-39651888,39653611-39653892
Length = 149
Score = 26.6 bits (56), Expect = 8.2
Identities = 19/61 (31%), Positives = 24/61 (39%)
Frame = +1
Query: 43 ASVPPSSHIGVLRGARQQTHPVRSLGVDEEQIPRPVHRSPQHRQGHGHAHRSRRGVHFDI 222
A+V GAR + P R L + + R R R GH HR RR + I
Sbjct: 3 AAVAGGGEDAAAAGARLRERPARGLWLGADCAERG--REKGGRSGHPARHRHRRDLEEAI 60
Query: 223 P 225
P
Sbjct: 61 P 61
>01_01_0508 +
3710435-3710980,3711086-3711238,3711323-3711408,
3711533-3711617,3711705-3711824,3711906-3711974,
3712088-3712217,3712336-3712406
Length = 419
Score = 26.6 bits (56), Expect = 8.2
Identities = 23/98 (23%), Positives = 41/98 (41%), Gaps = 1/98 (1%)
Frame = +2
Query: 5 PWCSPDQLSFVAEQVSHHPPISAFYAEHVNK-RIQFEAWVWTKSKFLGLSIGVHNIGKGT 181
P S QL+ +A + H + F ++K + F + F + + +G+ T
Sbjct: 176 PRISISQLAKIAPLAAGHMLGTVFTNMSLSKVAVSFTHTIKASEPFFTVLLSAFFLGE-T 234
Query: 182 VTLIDLGEEYTLTFPNGYGTSILTDRGSNWAALWSSSA 295
+L+ LG + G + LT+ NW WS+ A
Sbjct: 235 PSLLVLGSLVPIV--GGVALASLTELSFNWIGFWSAMA 270
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,253,625
Number of Sequences: 37544
Number of extensions: 334300
Number of successful extensions: 1125
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1074
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1119
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 778540620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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