Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0122
(424 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000195-8|AAN84853.1| 400|Caenorhabditis elegans Oxysterol bin... 109 6e-25
AF000195-7|AAC24270.1| 676|Caenorhabditis elegans Oxysterol bin... 109 6e-25
Z78541-3|CAD44120.1| 733|Caenorhabditis elegans Hypothetical pr... 55 2e-08
Z70269-4|CAA94223.2| 733|Caenorhabditis elegans Hypothetical pr... 55 2e-08
Z70269-1|CAD44161.1| 770|Caenorhabditis elegans Hypothetical pr... 55 2e-08
Z81061-1|CAB02934.3| 436|Caenorhabditis elegans Hypothetical pr... 39 0.002
AL117202-30|CAO82060.1| 449|Caenorhabditis elegans Hypothetical... 33 0.064
AL117202-29|CAO82059.1| 842|Caenorhabditis elegans Hypothetical... 33 0.064
AL117202-15|CAC42376.1| 627|Caenorhabditis elegans Hypothetical... 33 0.064
AL117202-14|CAB57894.2| 766|Caenorhabditis elegans Hypothetical... 33 0.064
U41991-12|AAA83352.1| 251|Caenorhabditis elegans Hypothetical p... 29 1.4
AL021171-5|CAE17871.1| 688|Caenorhabditis elegans Hypothetical ... 28 2.4
AF106576-1|AAC78177.2| 664|Caenorhabditis elegans Hypothetical ... 28 3.2
Z70208-3|CAA94142.2| 1111|Caenorhabditis elegans Hypothetical pr... 27 4.2
AF200706-1|AAF15883.1| 1111|Caenorhabditis elegans UNC-84A protein. 27 4.2
AL110499-1|CAB57912.1| 325|Caenorhabditis elegans Hypothetical ... 27 5.5
Z83239-5|CAB05809.1| 160|Caenorhabditis elegans Hypothetical pr... 27 7.3
U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical pr... 27 7.3
Z99942-7|CAB17070.2| 462|Caenorhabditis elegans Hypothetical pr... 26 9.7
Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical pr... 26 9.7
>AF000195-8|AAN84853.1| 400|Caenorhabditis elegans Oxysterol
binding protein (osbp)related protein 4, isoform b
protein.
Length = 400
Score = 109 bits (263), Expect = 6e-25
Identities = 53/86 (61%), Positives = 68/86 (79%), Gaps = 3/86 (3%)
Frame = +2
Query: 5 PWCSPD--QLSFVAEQVSHHPPISAFYAEHVNKRIQFEAWVWTKSKFLGLSIGVHNIGKG 178
PW D QL+F+AEQVSHHPPISAFYAE ++ I F A ++TKS FLGLSIGV +IG+G
Sbjct: 147 PWPGSDEKQLTFIAEQVSHHPPISAFYAEMPSEGISFNAHIYTKSSFLGLSIGVASIGEG 206
Query: 179 TVTLIDLG-EEYTLTFPNGYGTSILT 253
+TL + G E+YT+TFP+GYG SI++
Sbjct: 207 ILTLHNYGDEQYTITFPSGYGRSIMS 232
Score = 74.9 bits (176), Expect = 2e-14
Identities = 31/56 (55%), Positives = 39/56 (69%)
Frame = +1
Query: 256 PWIELGGSVVIECVQTGHKANIEFLTKPFYGGKKHRVTCEIFAGAEKKPYYTAQGE 423
PW E GG V +EC +TG++A+IEFLTKPF+GGK HR+ I KKP T +GE
Sbjct: 234 PWFEFGGKVKVECEKTGYRADIEFLTKPFFGGKPHRIQGSICRDGAKKPVLTLRGE 289
>AF000195-7|AAC24270.1| 676|Caenorhabditis elegans Oxysterol
binding protein (osbp)related protein 4, isoform a
protein.
Length = 676
Score = 109 bits (263), Expect = 6e-25
Identities = 53/86 (61%), Positives = 68/86 (79%), Gaps = 3/86 (3%)
Frame = +2
Query: 5 PWCSPD--QLSFVAEQVSHHPPISAFYAEHVNKRIQFEAWVWTKSKFLGLSIGVHNIGKG 178
PW D QL+F+AEQVSHHPPISAFYAE ++ I F A ++TKS FLGLSIGV +IG+G
Sbjct: 423 PWPGSDEKQLTFIAEQVSHHPPISAFYAEMPSEGISFNAHIYTKSSFLGLSIGVASIGEG 482
Query: 179 TVTLIDLG-EEYTLTFPNGYGTSILT 253
+TL + G E+YT+TFP+GYG SI++
Sbjct: 483 ILTLHNYGDEQYTITFPSGYGRSIMS 508
Score = 74.9 bits (176), Expect = 2e-14
Identities = 31/56 (55%), Positives = 39/56 (69%)
Frame = +1
Query: 256 PWIELGGSVVIECVQTGHKANIEFLTKPFYGGKKHRVTCEIFAGAEKKPYYTAQGE 423
PW E GG V +EC +TG++A+IEFLTKPF+GGK HR+ I KKP T +GE
Sbjct: 510 PWFEFGGKVKVECEKTGYRADIEFLTKPFFGGKPHRIQGSICRDGAKKPVLTLRGE 565
>Z78541-3|CAD44120.1| 733|Caenorhabditis elegans Hypothetical
protein ZK1086.1a protein.
Length = 733
Score = 55.2 bits (127), Expect = 2e-08
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Frame = +2
Query: 8 WCSPDQLS--FVAEQVSHHPPISAFYAEHVNKRIQFEAWVWTKSKFLGLSIGVHNIGKGT 181
W PD + ++AEQVSHHPP+S+ + + + KSK+ G S+ GK
Sbjct: 360 WEHPDGSTTFYMAEQVSHHPPVSSLFITNRKAGFNISGTILAKSKYYGNSLSAILAGKLR 419
Query: 182 VTLIDLGEEYTLTFP 226
+TL++LGE Y + P
Sbjct: 420 LTLLNLGETYIVNLP 434
Score = 41.5 bits (93), Expect = 2e-04
Identities = 17/45 (37%), Positives = 29/45 (64%)
Frame = +1
Query: 262 IELGGSVVIECVQTGHKANIEFLTKPFYGGKKHRVTCEIFAGAEK 396
+ELGG V IEC +TG++ ++F KP GG +++ I G+++
Sbjct: 448 MELGGEVNIECEKTGYRTTLDFKLKPMLGGAYNQIEGSIKYGSDR 492
>Z70269-4|CAA94223.2| 733|Caenorhabditis elegans Hypothetical
protein ZK1086.1a protein.
Length = 733
Score = 55.2 bits (127), Expect = 2e-08
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Frame = +2
Query: 8 WCSPDQLS--FVAEQVSHHPPISAFYAEHVNKRIQFEAWVWTKSKFLGLSIGVHNIGKGT 181
W PD + ++AEQVSHHPP+S+ + + + KSK+ G S+ GK
Sbjct: 360 WEHPDGSTTFYMAEQVSHHPPVSSLFITNRKAGFNISGTILAKSKYYGNSLSAILAGKLR 419
Query: 182 VTLIDLGEEYTLTFP 226
+TL++LGE Y + P
Sbjct: 420 LTLLNLGETYIVNLP 434
Score = 41.5 bits (93), Expect = 2e-04
Identities = 17/45 (37%), Positives = 29/45 (64%)
Frame = +1
Query: 262 IELGGSVVIECVQTGHKANIEFLTKPFYGGKKHRVTCEIFAGAEK 396
+ELGG V IEC +TG++ ++F KP GG +++ I G+++
Sbjct: 448 MELGGEVNIECEKTGYRTTLDFKLKPMLGGAYNQIEGSIKYGSDR 492
>Z70269-1|CAD44161.1| 770|Caenorhabditis elegans Hypothetical
protein ZK1086.1b protein.
Length = 770
Score = 55.2 bits (127), Expect = 2e-08
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Frame = +2
Query: 8 WCSPDQLS--FVAEQVSHHPPISAFYAEHVNKRIQFEAWVWTKSKFLGLSIGVHNIGKGT 181
W PD + ++AEQVSHHPP+S+ + + + KSK+ G S+ GK
Sbjct: 397 WEHPDGSTTFYMAEQVSHHPPVSSLFITNRKAGFNISGTILAKSKYYGNSLSAILAGKLR 456
Query: 182 VTLIDLGEEYTLTFP 226
+TL++LGE Y + P
Sbjct: 457 LTLLNLGETYIVNLP 471
Score = 41.5 bits (93), Expect = 2e-04
Identities = 17/45 (37%), Positives = 29/45 (64%)
Frame = +1
Query: 262 IELGGSVVIECVQTGHKANIEFLTKPFYGGKKHRVTCEIFAGAEK 396
+ELGG V IEC +TG++ ++F KP GG +++ I G+++
Sbjct: 485 MELGGEVNIECEKTGYRTTLDFKLKPMLGGAYNQIEGSIKYGSDR 529
>Z81061-1|CAB02934.3| 436|Caenorhabditis elegans Hypothetical
protein F14H8.1 protein.
Length = 436
Score = 38.7 bits (86), Expect = 0.002
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = +2
Query: 32 FVAEQVSHHPPISAFYAE 85
F+AEQVSHHPPISA YAE
Sbjct: 138 FLAEQVSHHPPISAVYAE 155
>AL117202-30|CAO82060.1| 449|Caenorhabditis elegans Hypothetical
protein Y47D3A.17d protein.
Length = 449
Score = 33.5 bits (73), Expect = 0.064
Identities = 20/46 (43%), Positives = 27/46 (58%)
Frame = +2
Query: 35 VAEQVSHHPPISAFYAEHVNKRIQFEAWVWTKSKFLGLSIGVHNIG 172
V EQVSHHPP +A +AE N ++ + T S+F G + V IG
Sbjct: 162 VTEQVSHHPPAAAHHAEG-NGWTMYQDFTMT-SRFRGKYLSVIPIG 205
>AL117202-29|CAO82059.1| 842|Caenorhabditis elegans Hypothetical
protein Y47D3A.17c protein.
Length = 842
Score = 33.5 bits (73), Expect = 0.064
Identities = 20/46 (43%), Positives = 27/46 (58%)
Frame = +2
Query: 35 VAEQVSHHPPISAFYAEHVNKRIQFEAWVWTKSKFLGLSIGVHNIG 172
V EQVSHHPP +A +AE N ++ + T S+F G + V IG
Sbjct: 555 VTEQVSHHPPAAAHHAEG-NGWTMYQDFTMT-SRFRGKYLSVIPIG 598
>AL117202-15|CAC42376.1| 627|Caenorhabditis elegans Hypothetical
protein Y47D3A.17b protein.
Length = 627
Score = 33.5 bits (73), Expect = 0.064
Identities = 20/46 (43%), Positives = 27/46 (58%)
Frame = +2
Query: 35 VAEQVSHHPPISAFYAEHVNKRIQFEAWVWTKSKFLGLSIGVHNIG 172
V EQVSHHPP +A +AE N ++ + T S+F G + V IG
Sbjct: 340 VTEQVSHHPPAAAHHAEG-NGWTMYQDFTMT-SRFRGKYLSVIPIG 383
>AL117202-14|CAB57894.2| 766|Caenorhabditis elegans Hypothetical
protein Y47D3A.17a protein.
Length = 766
Score = 33.5 bits (73), Expect = 0.064
Identities = 20/46 (43%), Positives = 27/46 (58%)
Frame = +2
Query: 35 VAEQVSHHPPISAFYAEHVNKRIQFEAWVWTKSKFLGLSIGVHNIG 172
V EQVSHHPP +A +AE N ++ + T S+F G + V IG
Sbjct: 479 VTEQVSHHPPAAAHHAEG-NGWTMYQDFTMT-SRFRGKYLSVIPIG 522
>U41991-12|AAA83352.1| 251|Caenorhabditis elegans Hypothetical
protein C42D4.1 protein.
Length = 251
Score = 29.1 bits (62), Expect = 1.4
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +1
Query: 160 PQHRQGHGHAHRSRRGVHF 216
P+H GHGH HR G F
Sbjct: 167 PRHGHGHGHGHRFHHGRRF 185
>AL021171-5|CAE17871.1| 688|Caenorhabditis elegans Hypothetical
protein H04D03.4 protein.
Length = 688
Score = 28.3 bits (60), Expect = 2.4
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +1
Query: 232 LRHININGPWIELGGSVVIECVQTGHKANIEFLTKPFYGGKKHRVTCEI 378
L+H+N+ G W+ CV+T ++ +FL G +HR+ EI
Sbjct: 60 LKHVNLEGSWV---------CVETVNELQKQFLESFVIGSIQHRLRDEI 99
>AF106576-1|AAC78177.2| 664|Caenorhabditis elegans Hypothetical
protein W07E6.1 protein.
Length = 664
Score = 27.9 bits (59), Expect = 3.2
Identities = 13/49 (26%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = +2
Query: 158 VHNIGKGTVTLIDLG-EEYTLTFPNGYGTSILTDRGSNWAALWSSSACK 301
+H +G + +LG EE++ PNG+ +L S +W + K
Sbjct: 350 LHRLGVNNTVVCNLGGEEFSKIRPNGFDRILLDAPCSGTGVIWKDQSVK 398
>Z70208-3|CAA94142.2| 1111|Caenorhabditis elegans Hypothetical protein
F54B11.3a protein.
Length = 1111
Score = 27.5 bits (58), Expect = 4.2
Identities = 8/32 (25%), Positives = 17/32 (53%)
Frame = +2
Query: 8 WCSPDQLSFVAEQVSHHPPISAFYAEHVNKRI 103
WC + ++A ++SH +S+ EH+ +
Sbjct: 995 WCFKESRGYIAVELSHFIDVSSISYEHIGSEV 1026
>AF200706-1|AAF15883.1| 1111|Caenorhabditis elegans UNC-84A protein.
Length = 1111
Score = 27.5 bits (58), Expect = 4.2
Identities = 8/32 (25%), Positives = 17/32 (53%)
Frame = +2
Query: 8 WCSPDQLSFVAEQVSHHPPISAFYAEHVNKRI 103
WC + ++A ++SH +S+ EH+ +
Sbjct: 995 WCFKESRGYIAVELSHFIDVSSISYEHIGSEV 1026
>AL110499-1|CAB57912.1| 325|Caenorhabditis elegans Hypothetical
protein Y62F5A.1a protein.
Length = 325
Score = 27.1 bits (57), Expect = 5.5
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = +3
Query: 225 PMVTAHQY*RTVDRTGRLCGHRVRANRPQSQHRVPNEAILR 347
PM H T+ G++ GH ++ RP PN I R
Sbjct: 284 PMNPQHHSPMTMMAPGQMIGHPIQQQRPPMHQMPPNMTIQR 324
>Z83239-5|CAB05809.1| 160|Caenorhabditis elegans Hypothetical
protein T09F5.9 protein.
Length = 160
Score = 26.6 bits (56), Expect = 7.3
Identities = 10/31 (32%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = +2
Query: 209 YTLTFPN-GYGTSILTDRGSNWAALWSSSAC 298
+ +PN GYG + + N A W S+ C
Sbjct: 115 FAKAYPNTGYGNCVFVETAGNSAGQWFSATC 145
>U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical protein
C41A3.1 protein.
Length = 7829
Score = 26.6 bits (56), Expect = 7.3
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 343 YGGKKHRVTCEIFAGAEKKPY 405
Y +KH + C +FAGAE Y
Sbjct: 5414 YVKQKHELRCGVFAGAEPSDY 5434
>Z99942-7|CAB17070.2| 462|Caenorhabditis elegans Hypothetical
protein H13N06.5 protein.
Length = 462
Score = 26.2 bits (55), Expect = 9.7
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +1
Query: 166 HRQGHGHAHRSRRGVH 213
H QGHGHAH H
Sbjct: 39 HHQGHGHAHGGHGHAH 54
>Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical
protein K01A6.2 protein.
Length = 1092
Score = 26.2 bits (55), Expect = 9.7
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +2
Query: 8 WCSPDQLSFVAEQVSHHPPISAFYAEHVNKRIQFE 112
W P +L EQV FY +H+N++ Q+E
Sbjct: 326 WDDPRELPPGWEQVDDQN-YGTFYVDHINRKTQYE 359
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,155,664
Number of Sequences: 27780
Number of extensions: 248733
Number of successful extensions: 876
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 805
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 867
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 692685370
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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