Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0122
(424 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g09300.1 68416.m01104 oxysterol-binding family protein simila... 54 5e-08
At5g02100.1 68418.m00131 oxysterol-binding family protein simila... 53 7e-08
At5g57240.1 68418.m07151 oxysterol-binding family protein low si... 53 9e-08
At5g59420.1 68418.m07446 oxysterol-binding family protein simila... 51 3e-07
At4g25850.1 68417.m03718 oxysterol-binding family protein contai... 47 6e-06
At4g25860.1 68417.m03719 oxysterol-binding family protein contai... 45 2e-05
At4g22540.2 68417.m03252 oxysterol-binding family protein simila... 34 0.046
At4g22540.1 68417.m03253 oxysterol-binding family protein simila... 34 0.046
At2g31030.1 68415.m03783 oxysterol-binding family protein simila... 33 0.080
At2g31020.1 68415.m03782 oxysterol-binding family protein simila... 33 0.080
At1g13170.1 68414.m01527 oxysterol-binding family protein simila... 33 0.080
At4g12460.1 68417.m01971 oxysterol-binding family protein simila... 32 0.18
At4g08180.3 68417.m01353 oxysterol-binding family protein simila... 31 0.32
At4g08180.2 68417.m01352 oxysterol-binding family protein simila... 31 0.32
At4g08180.1 68417.m01351 oxysterol-binding family protein simila... 31 0.32
At3g63100.1 68416.m07087 glycine-rich protein 23 1.1
At4g15570.1 68417.m02379 tRNA-splicing endonuclease positive eff... 29 1.3
At5g62760.2 68418.m07879 nuclear protein ZAP-related similar to ... 29 1.7
At5g62760.1 68418.m07878 nuclear protein ZAP-related similar to ... 29 1.7
At1g55820.1 68414.m06400 hydroxyproline-rich glycoprotein family... 28 2.3
At3g61940.1 68416.m06956 zinc transporter, putative similar to z... 28 3.0
At3g51450.1 68416.m05635 strictosidine synthase family protein s... 28 3.0
At3g19553.1 68416.m02479 amino acid permease family protein weak... 28 3.0
At5g41490.1 68418.m05038 F-box family protein contains Pfam prof... 27 4.0
At5g49890.1 68418.m06178 chloride channel protein (CLC-c) identi... 27 6.9
At4g16480.1 68417.m02495 sugar transporter family protein simila... 27 6.9
At3g22950.1 68416.m02893 ADP-ribosylation factor, putative simil... 27 6.9
At2g46080.1 68415.m05732 expressed protein 27 6.9
At1g19230.1 68414.m02393 respiratory burst oxidase protein E (Rb... 27 6.9
At1g15880.1 68414.m01905 Golgi SNARE 11 protein identical to Gol... 27 6.9
At1g09410.1 68414.m01052 pentatricopeptide (PPR) repeat-containi... 27 6.9
At5g40380.1 68418.m04898 protein kinase family protein contains ... 26 9.1
At5g20440.1 68418.m02430 mob1/phocein family protein contains Pf... 26 9.1
At5g06330.1 68418.m00709 hairpin-responsive protein, putative (H... 26 9.1
At2g40070.1 68415.m04923 expressed protein 26 9.1
At2g29200.1 68415.m03549 pumilio/Puf RNA-binding domain-containi... 26 9.1
At2g29190.1 68415.m03548 pumilio/Puf RNA-binding domain-containi... 26 9.1
At2g29140.1 68415.m03542 pumilio/Puf RNA-binding domain-containi... 26 9.1
At1g76920.1 68414.m08954 F-box family protein (FBX3) contains si... 26 9.1
At1g13350.1 68414.m01550 protein kinase family protein contains ... 26 9.1
>At3g09300.1 68416.m01104 oxysterol-binding family protein similar
to SP|P22059 Oxysterol-binding protein 1 {Homo sapiens};
contains Pfam profile PF01237: Oxysterol-binding protein
Length = 458
Score = 53.6 bits (123), Expect = 5e-08
Identities = 26/55 (47%), Positives = 39/55 (70%)
Frame = +2
Query: 26 LSFVAEQVSHHPPISAFYAEHVNKRIQFEAWVWTKSKFLGLSIGVHNIGKGTVTL 190
++F++EQVSHHPP+SA +AE N+ ++ K+KFLG SI V+ +G+ VTL
Sbjct: 166 VNFISEQVSHHPPMSAGHAE--NEHFTYDCTSKLKTKFLGNSIDVYPVGRTRVTL 218
>At5g02100.1 68418.m00131 oxysterol-binding family protein similar
to SWH1 [Saccharomyces cerevisiae] GI:402658; contains
Pfam profile PF01237: Oxysterol-binding protein
Length = 453
Score = 53.2 bits (122), Expect = 7e-08
Identities = 26/55 (47%), Positives = 38/55 (69%)
Frame = +2
Query: 26 LSFVAEQVSHHPPISAFYAEHVNKRIQFEAWVWTKSKFLGLSIGVHNIGKGTVTL 190
++F+AEQV HHPP+SA +AE N+ ++ K+KFLG SI V+ +G+ VTL
Sbjct: 161 INFIAEQVCHHPPMSAGHAE--NEHFAYDCTSKLKTKFLGNSIDVYPVGRTRVTL 213
>At5g57240.1 68418.m07151 oxysterol-binding family protein low
similarity to SP|P22059 Oxysterol-binding protein 1
{Homo sapiens}; contains Pfam profile PF01237:
Oxysterol-binding protein
Length = 379
Score = 52.8 bits (121), Expect = 9e-08
Identities = 29/87 (33%), Positives = 44/87 (50%)
Frame = +2
Query: 14 SPDQLSFVAEQVSHHPPISAFYAEHVNKRIQFEAWVWTKSKFLGLSIGVHNIGKGTVTLI 193
S ++ +AEQ+SHHPP+SA +A H + + + KF G + V GK V L+
Sbjct: 120 SNGHINVLAEQISHHPPVSALHATHEKENVDVLLCQYFTPKFRGAYVDVEVKGKRVVKLL 179
Query: 194 DLGEEYTLTFPNGYGTSILTDRGSNWA 274
+ E Y + P T L G++WA
Sbjct: 180 NHKETYEMNQPKLLMT-FLPAMGAHWA 205
Score = 31.5 bits (68), Expect = 0.24
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +1
Query: 274 GSVVIECVQTGHKANIEFLTKPFY----GGKKHRVTCEIFAGAEKKPYYTAQG 420
G +VI+C +TG A ++ L+ F G K + +IF + +K Y G
Sbjct: 206 GKIVIKCPETGLGAELQLLSDSFLSRFTGNNKRAIKGKIFESSSRKQLYEISG 258
>At5g59420.1 68418.m07446 oxysterol-binding family protein similar
to SP|P16258 Oxysterol-binding protein 1 {Oryctolagus
cuniculus}; contains Pfam profile PF01237:
Oxysterol-binding protein
Length = 457
Score = 51.2 bits (117), Expect = 3e-07
Identities = 25/55 (45%), Positives = 38/55 (69%)
Frame = +2
Query: 26 LSFVAEQVSHHPPISAFYAEHVNKRIQFEAWVWTKSKFLGLSIGVHNIGKGTVTL 190
+SF++EQVSHHPP+SA +AE N+ ++ K+K LG S+ V+ +G+ VTL
Sbjct: 161 ISFISEQVSHHPPMSAGHAE--NEHFIYDITSKLKTKLLGNSVDVYPVGRTRVTL 213
>At4g25850.1 68417.m03718 oxysterol-binding family protein contains
Pfam profile PF01237: Oxysterol-binding protein
Length = 383
Score = 46.8 bits (106), Expect = 6e-06
Identities = 28/87 (32%), Positives = 41/87 (47%)
Frame = +2
Query: 14 SPDQLSFVAEQVSHHPPISAFYAEHVNKRIQFEAWVWTKSKFLGLSIGVHNIGKGTVTLI 193
S ++ +AEQV HHPP+SA +A H + I + KF G + V GK + L+
Sbjct: 125 SNGHINVIAEQVVHHPPVSALHATHEQENIDVTWCQYFTPKFRGTHVDVEVKGKRVMKLL 184
Query: 194 DLGEEYTLTFPNGYGTSILTDRGSNWA 274
+ E Y + P L G+ WA
Sbjct: 185 NHIETYEMDQPR-LIMRFLPAPGAYWA 210
>At4g25860.1 68417.m03719 oxysterol-binding family protein contains
Pfam profile PF01237: Oxysterol-binding protein
Length = 386
Score = 45.2 bits (102), Expect = 2e-05
Identities = 26/83 (31%), Positives = 39/83 (46%)
Frame = +2
Query: 26 LSFVAEQVSHHPPISAFYAEHVNKRIQFEAWVWTKSKFLGLSIGVHNIGKGTVTLIDLGE 205
++ + EQV HHPP+SA +A H + I + KF G + V GK + L+ E
Sbjct: 130 INVLTEQVMHHPPVSALHATHEQENIDVTWCQYFTPKFRGAYVDVEVNGKRIMKLLHHKE 189
Query: 206 EYTLTFPNGYGTSILTDRGSNWA 274
Y + P L G++WA
Sbjct: 190 TYEMDQPR-LIMKFLPAPGAHWA 211
>At4g22540.2 68417.m03252 oxysterol-binding family protein similar
to SP|P16258 Oxysterol-binding protein 1 {Oryctolagus
cuniculus}; contains Pfam profiles PF00169: PH domain,
PF01237: Oxysterol-binding protein
Length = 510
Score = 33.9 bits (74), Expect = 0.046
Identities = 23/62 (37%), Positives = 33/62 (53%)
Frame = +2
Query: 26 LSFVAEQVSHHPPISAFYAEHVNKRIQFEAWVWTKSKFLGLSIGVHNIGKGTVTLIDLGE 205
+ F +E+VSHHP + A + E K +F +SKF G SI V +G T+ D GE
Sbjct: 230 IRFFSEKVSHHPTVIACHCE--GKGWKFWGDTNLRSKFWGRSIQVEPVGVLTLEFDD-GE 286
Query: 206 EY 211
+
Sbjct: 287 VF 288
>At4g22540.1 68417.m03253 oxysterol-binding family protein similar
to SP|P16258 Oxysterol-binding protein 1 {Oryctolagus
cuniculus}; contains Pfam profiles PF00169: PH domain,
PF01237: Oxysterol-binding protein
Length = 721
Score = 33.9 bits (74), Expect = 0.046
Identities = 23/62 (37%), Positives = 33/62 (53%)
Frame = +2
Query: 26 LSFVAEQVSHHPPISAFYAEHVNKRIQFEAWVWTKSKFLGLSIGVHNIGKGTVTLIDLGE 205
+ F +E+VSHHP + A + E K +F +SKF G SI V +G T+ D GE
Sbjct: 441 IRFFSEKVSHHPTVIACHCE--GKGWKFWGDTNLRSKFWGRSIQVEPVGVLTLEFDD-GE 497
Query: 206 EY 211
+
Sbjct: 498 VF 499
>At2g31030.1 68415.m03783 oxysterol-binding family protein similar
to SWH1 [Saccharomyces cerevisiae] GI:402658; contains
Pfam profile PF01237: Oxysterol-binding protein
Length = 489
Score = 33.1 bits (72), Expect = 0.080
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +2
Query: 17 PDQ-LSFVAEQVSHHPPISAFYAEHVNKRIQFEAWVWTKSKFLGLSIGVHNIGKGTVTLI 193
PD+ L F +E+VSHHP I A + + + ++ + KSKF G SI + IG T+
Sbjct: 219 PDKGLRFFSEKVSHHPMIVACHCDGTGWKFWGDSNL--KSKFWGRSIQLDPIGLLTLQFD 276
Query: 194 D 196
D
Sbjct: 277 D 277
>At2g31020.1 68415.m03782 oxysterol-binding family protein similar
to SP|Q969R2 Oxysterol-binding protein 2 {Homo sapiens};
contains Pfam profiles PF00169: PH domain, PF01237:
Oxysterol-binding protein
Length = 760
Score = 33.1 bits (72), Expect = 0.080
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +2
Query: 17 PDQ-LSFVAEQVSHHPPISAFYAEHVNKRIQFEAWVWTKSKFLGLSIGVHNIGKGTVTLI 193
PD+ L F +E+VSHHP I A + + + ++ + KSKF G SI + IG T+
Sbjct: 486 PDKGLRFFSEKVSHHPMIVACHCDGTGWKFWGDSNL--KSKFWGRSIQLDPIGLLTLQFD 543
Query: 194 D 196
D
Sbjct: 544 D 544
>At1g13170.1 68414.m01527 oxysterol-binding family protein similar
to SP|P16258 Oxysterol-binding protein 1 {Oryctolagus
cuniculus}; contains Pfam profiles PF00169: PH domain,
PF01237: Oxysterol-binding protein
Length = 816
Score = 33.1 bits (72), Expect = 0.080
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +2
Query: 17 PDQ-LSFVAEQVSHHPPISAFYAEHVNKRIQFEAWVWTKSKFLGLSIGVHNIGKGTVTLI 193
PD+ L F +E+VSHHP I A + E ++ + K KF G SI + +G T+
Sbjct: 526 PDKGLRFFSEKVSHHPMIVACHCEGQGWNFWGDSNI--KGKFWGRSIQLDPVGVLTLKFD 583
Query: 194 DLGEEY 211
D GE Y
Sbjct: 584 D-GEIY 588
>At4g12460.1 68417.m01971 oxysterol-binding family protein similar
to SP|P22059 Oxysterol-binding protein 1 {Homo sapiens};
contains Pfam profiles PF00169: PH domain, PF01237:
Oxysterol-binding protein
Length = 694
Score = 31.9 bits (69), Expect = 0.18
Identities = 20/57 (35%), Positives = 30/57 (52%)
Frame = +2
Query: 26 LSFVAEQVSHHPPISAFYAEHVNKRIQFEAWVWTKSKFLGLSIGVHNIGKGTVTLID 196
+ F +E+VSHHP + A + E K +F +SKF G SI + +G T+ D
Sbjct: 421 IRFFSEKVSHHPTVIACHCE--GKGWKFWGDTNLRSKFWGRSIQLEPVGILTLEFDD 475
>At4g08180.3 68417.m01353 oxysterol-binding family protein similar
to SP|Q969R2 Oxysterol-binding protein 2 {Homo sapiens};
contains Pfam profiles PF00169: PH domain, PF01237:
Oxysterol-binding protein
Length = 813
Score = 31.1 bits (67), Expect = 0.32
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +2
Query: 17 PDQ-LSFVAEQVSHHPPISAFYAEHVNKRIQFEAWVWTKSKFLGLSIGVHNIGKGTVTLI 193
PD+ L F +E+VSHHP + A + + + ++ + +SKF G SI + +G T+
Sbjct: 529 PDKGLRFFSEKVSHHPMVVACHCDGTGWKFWGDSNL--RSKFWGRSIQLDPVGVLTLQFD 586
Query: 194 D 196
D
Sbjct: 587 D 587
>At4g08180.2 68417.m01352 oxysterol-binding family protein similar
to SP|Q969R2 Oxysterol-binding protein 2 {Homo sapiens};
contains Pfam profiles PF00169: PH domain, PF01237:
Oxysterol-binding protein
Length = 813
Score = 31.1 bits (67), Expect = 0.32
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +2
Query: 17 PDQ-LSFVAEQVSHHPPISAFYAEHVNKRIQFEAWVWTKSKFLGLSIGVHNIGKGTVTLI 193
PD+ L F +E+VSHHP + A + + + ++ + +SKF G SI + +G T+
Sbjct: 529 PDKGLRFFSEKVSHHPMVVACHCDGTGWKFWGDSNL--RSKFWGRSIQLDPVGVLTLQFD 586
Query: 194 D 196
D
Sbjct: 587 D 587
>At4g08180.1 68417.m01351 oxysterol-binding family protein similar
to SP|Q969R2 Oxysterol-binding protein 2 {Homo sapiens};
contains Pfam profiles PF00169: PH domain, PF01237:
Oxysterol-binding protein
Length = 814
Score = 31.1 bits (67), Expect = 0.32
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +2
Query: 17 PDQ-LSFVAEQVSHHPPISAFYAEHVNKRIQFEAWVWTKSKFLGLSIGVHNIGKGTVTLI 193
PD+ L F +E+VSHHP + A + + + ++ + +SKF G SI + +G T+
Sbjct: 530 PDKGLRFFSEKVSHHPMVVACHCDGTGWKFWGDSNL--RSKFWGRSIQLDPVGVLTLQFD 587
Query: 194 D 196
D
Sbjct: 588 D 588
>At3g63100.1 68416.m07087 glycine-rich protein
Length = 199
Score = 23.0 bits (47), Expect(3) = 1.1
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +1
Query: 166 HRQGHGHAHR 195
H GHGH HR
Sbjct: 98 HGHGHGHGHR 107
Score = 21.8 bits (44), Expect(3) = 1.1
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +1
Query: 154 RSPQHRQGHGHAH 192
R H +GHGH H
Sbjct: 90 RGHGHGRGHGHGH 102
Score = 21.4 bits (43), Expect(3) = 1.1
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +1
Query: 175 GHGHAHRSRR 204
GHGH H RR
Sbjct: 99 GHGHGHGHRR 108
>At4g15570.1 68417.m02379 tRNA-splicing endonuclease positive
effector-related contains similarity to SEN1, a positive
effector of tRNA-splicing endonuclease [Saccharomyces
cerevisiae] gi|172574|gb|AAB63976
Length = 818
Score = 29.1 bits (62), Expect = 1.3
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = +1
Query: 148 VHRSPQHRQGHGHAHRSRRGVHFDIPQWLRHININGPWI 264
+H +P Q G H +RG+ I + H PWI
Sbjct: 298 MHATPARVQSKGTDHEVKRGIQMTIQEKYNHWGRASPWI 336
>At5g62760.2 68418.m07879 nuclear protein ZAP-related similar to
nuclear protein ZAP, Mus musculus, EMBL:AB033168 this
cDNA provides a truncated ORF likely due to a skipped
exon. An alternative ORF is provided.
Length = 383
Score = 28.7 bits (61), Expect = 1.7
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 5/54 (9%)
Frame = +1
Query: 22 PVVVRGRASVPPSSHIGVLRGARQ---QTHPVRSLGVDEEQIPRPVHRS--PQH 168
PV ++PPSS + A Q P RS +D + +P HRS P H
Sbjct: 223 PVTTNSSPTIPPSSSYPQMPNASPSSAQLAPTRSKVIDVSHLLKPPHRSTRPDH 276
>At5g62760.1 68418.m07878 nuclear protein ZAP-related similar to
nuclear protein ZAP, Mus musculus, EMBL:AB033168 this
cDNA provides a truncated ORF likely due to a skipped
exon. An alternative ORF is provided.
Length = 661
Score = 28.7 bits (61), Expect = 1.7
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 5/54 (9%)
Frame = +1
Query: 22 PVVVRGRASVPPSSHIGVLRGARQ---QTHPVRSLGVDEEQIPRPVHRS--PQH 168
PV ++PPSS + A Q P RS +D + +P HRS P H
Sbjct: 223 PVTTNSSPTIPPSSSYPQMPNASPSSAQLAPTRSKVIDVSHLLKPPHRSTRPDH 276
>At1g55820.1 68414.m06400 hydroxyproline-rich glycoprotein family
protein
Length = 575
Score = 28.3 bits (60), Expect = 2.3
Identities = 13/57 (22%), Positives = 24/57 (42%)
Frame = +1
Query: 70 GVLRGARQQTHPVRSLGVDEEQIPRPVHRSPQHRQGHGHAHRSRRGVHFDIPQWLRH 240
G L G Q T P+ + + +P P H + + GH H + + + W+ +
Sbjct: 518 GGLMGMHQPTQPMAAASTTYQTLPPPPHTTTAMGEPIGHPHIAYQQPQAALTNWVNN 574
>At3g61940.1 68416.m06956 zinc transporter, putative similar to zinc
transporter ZAT [Arabidopsis thaliana]
gi|4206640|gb|AAD11757; similar to zinc transporter
ZnT-2 [Rattus norvegicus] gi|1256378|gb|AAB02775; member
of the cation diffusion facilitator (CDF) family, or
cation efflux (CE) family, PMID:11500563
Length = 334
Score = 27.9 bits (59), Expect = 3.0
Identities = 10/40 (25%), Positives = 22/40 (55%)
Frame = +1
Query: 166 HRQGHGHAHRSRRGVHFDIPQWLRHININGPWIELGGSVV 285
H HGH++ R + + +R+IN+ G ++ + G ++
Sbjct: 168 HSHDHGHSYGERAEQLLEKSKEIRNINVQGAYLHVLGDLI 207
>At3g51450.1 68416.m05635 strictosidine synthase family protein
similar to hemomucin [Drosophila
melanogaster][GI:1280434], strictosidine synthase
[Rauvolfia serpentina][SP|P15324]
Length = 371
Score = 27.9 bits (59), Expect = 3.0
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +2
Query: 80 AEHVNKRIQFEAWVWTKSKFLGLSIGVHNIGKGTVTLIDLGEEYTLTFPNGYGTSILTD 256
A+ VN + E WV T + LG++ G+H G V + D+ + +G T +LTD
Sbjct: 97 ADSVNDSV-VEDWVNTGGRPLGIAFGIH----GEVIVADVHKGLLNISGDGKKTELLTD 150
>At3g19553.1 68416.m02479 amino acid permease family protein weak
similarity to aspartate/glutamate transporter 1 [Mus
musculus] GI:21322754; contains Pfam profile PF00324:
Amino acid permease
Length = 479
Score = 27.9 bits (59), Expect = 3.0
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = -2
Query: 195 SMSVTVPLPMLWTPMDRPRNLLFVHTQASNWMRLLTCSA*NADMGGWWDTCS 40
S+ V + +L P RP+ LFV TQ NW N + +WD S
Sbjct: 172 SLCPFVVMALLAVPNIRPKRWLFVDTQKINWRGYFNTMFWNLN---YWDKAS 220
>At5g41490.1 68418.m05038 F-box family protein contains Pfam
profile: PF00646 F-box domain
Length = 387
Score = 27.5 bits (58), Expect = 4.0
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 9/61 (14%)
Frame = +2
Query: 2 VPWCSPDQ-LSFVAEQVSHHPPISAFYAEHVNKRIQFEAWVWTK--------SKFLGLSI 154
+P+ + D+ S+V ++AF+ +++ + +FE WV TK SKFL + +
Sbjct: 248 LPFGATDRGYSYVNLSCVKEEKLAAFFQHYISYKYEFEIWVTTKIEAEMVSWSKFLRMDL 307
Query: 155 G 157
G
Sbjct: 308 G 308
>At5g49890.1 68418.m06178 chloride channel protein (CLC-c) identical
to gi:1742956
Length = 779
Score = 26.6 bits (56), Expect = 6.9
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -1
Query: 97 FVDVLRVERRYGRMVGHLLGHERQL 23
F+ V+ YGR+VG LLG QL
Sbjct: 490 FIPVILAGASYGRLVGRLLGPVSQL 514
>At4g16480.1 68417.m02495 sugar transporter family protein similar
to SP|Q96QE2 Proton myo-inositol co-transporter (Hmit)
[Homo sapiens]; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 582
Score = 26.6 bits (56), Expect = 6.9
Identities = 20/47 (42%), Positives = 23/47 (48%)
Frame = +2
Query: 137 FLGLSIGVHNIGKGTVTLIDLGEEYTLTFPNGYGTSILTDRGSNWAA 277
FLGL I V+ G GTV I E Y L + G G I SNW +
Sbjct: 463 FLGLYIVVYAPGMGTVPWIVNSEIYPLRY-RGLGGGIAA--VSNWVS 506
>At3g22950.1 68416.m02893 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor GB:P91924 [Dugesia japonica]
Length = 183
Score = 26.6 bits (56), Expect = 6.9
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 35 VAEQVSHHPPISAFYAEHVNKRIQFEAW 118
+ E V+ HP + + E V K I+FE W
Sbjct: 39 LGEVVTTHPTVGSNVEELVYKNIRFEVW 66
>At2g46080.1 68415.m05732 expressed protein
Length = 347
Score = 26.6 bits (56), Expect = 6.9
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 7/64 (10%)
Frame = +1
Query: 220 IPQWLRHININGPWIELGGSVVIECVQTGHKANI------EFLTKPFYGGKKHRV-TCEI 378
+ W +H+N N P IE +V+ V++ + + L + FYG K V C +
Sbjct: 150 LDSWRQHVNTNNPRIENCRAVLDSLVKSLSLPKVKNSPKGKVLMRAFYGVKVQTVYICSV 209
Query: 379 FAGA 390
F A
Sbjct: 210 FTAA 213
>At1g19230.1 68414.m02393 respiratory burst oxidase protein E
(RbohE) / NADPH oxidase nearly identical to respiratory
burst oxidase protein E GI:3242787 [gi:3242787] from
[Arabidopsis thaliana]
Length = 926
Score = 26.6 bits (56), Expect = 6.9
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -3
Query: 308 WPVCTHSMTTEPPSSIHG 255
W CT S TT P+S HG
Sbjct: 768 WNSCTSSYTTATPTSTHG 785
>At1g15880.1 68414.m01905 Golgi SNARE 11 protein identical to Golgi
SNARE 11 protein (GI:13898893) {Arabidopsis thaliana};
similar to putative cis-Golgi SNARE protein GI:2583133
from [Arabidopsis thaliana];similar toSP|O95249| 28 kDa
Golgi SNARE protein (28 kDa cis-Golgi SNARE p28)
(GOS-28). [Homo sapiens]; similar to Golgi SNARE protein
(Golgi SNAP receptor complex member 1) (28 kDa cis-Golgi
SNARE p28) (GOS-28) (SP:Q62931) {Rattus norvegicus}
Length = 223
Score = 26.6 bits (56), Expect = 6.9
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +1
Query: 259 WIELGGSVVIECVQTGHKANIEFLTKPFY 345
W+ GGS ++ T H+ ++ LT+ FY
Sbjct: 68 WVSSGGSEMVSHTLTRHQEILQDLTQEFY 96
>At1g09410.1 68414.m01052 pentatricopeptide (PPR) repeat-containing
protein contains INTERPRO:IPR002885 PPR repeats
Length = 705
Score = 26.6 bits (56), Expect = 6.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -3
Query: 290 SMTTEPPSSIHGPLILMCRNH 228
SMT EP +++ G L+ CR H
Sbjct: 494 SMTVEPDAAVWGSLLGACRTH 514
>At5g40380.1 68418.m04898 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 591
Score = 26.2 bits (55), Expect = 9.1
Identities = 19/72 (26%), Positives = 32/72 (44%)
Frame = -1
Query: 319 CWLCGRFARTR*PQSRPVRSTVR*Y*CAVTIGECQSVLLSEIDERDRALADVVDSYGQAE 140
C LC ARTR P+ P S + + C + + D +++D DS+ +
Sbjct: 39 CQLCYAIARTRIPRCLPSSSA------RIFLDGC-FLRYETYEFYDESVSDASDSFSCSN 91
Query: 139 EFALRPHPGFEL 104
+ L P GF++
Sbjct: 92 DTVLDPRFGFQV 103
>At5g20440.1 68418.m02430 mob1/phocein family protein contains Pfam
profile: PF03637 mob1/phocein family
Length = 217
Score = 26.2 bits (55), Expect = 9.1
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -3
Query: 110 RTGCVC*RAPRRTPIWEDGGTLARPRTTTGP 18
+T C A R W DG T+ +P+T + P
Sbjct: 84 QTTCPVMNAGRYEYRWADGTTITKPKTVSAP 114
>At5g06330.1 68418.m00709 hairpin-responsive protein, putative
(HIN1) similar to harpin-induced protein hin1 (
GI:1619321) [Nicotiana tabacum]
Length = 207
Score = 26.2 bits (55), Expect = 9.1
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -2
Query: 213 VYSSPRSMSVTVPLPMLWT 157
VY+S RS +T+P PML T
Sbjct: 95 VYASYRSQQITLPSPMLTT 113
>At2g40070.1 68415.m04923 expressed protein
Length = 607
Score = 26.2 bits (55), Expect = 9.1
Identities = 21/50 (42%), Positives = 25/50 (50%)
Frame = +2
Query: 263 SNWAALWSSSACKPATKPT*SS*RSHSTVARSTG*PARYSPALRRSRTTP 412
S +L SS A+KPT S+ RS +V RST S RS TTP
Sbjct: 239 SRSTSLSSSRLTPTASKPTTSTARSAGSVTRSTPSTTTKSAGPSRS-TTP 287
>At2g29200.1 68415.m03549 pumilio/Puf RNA-binding domain-containing
protein similar to BPM [Hordeum vulgare] GI:20513851
Length = 968
Score = 26.2 bits (55), Expect = 9.1
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +1
Query: 271 GGSVVIECVQTGHKANIEFLTKPFYG 348
G VV +C++ + NIEF+ F+G
Sbjct: 752 GNHVVQKCIECVPEENIEFIISTFFG 777
>At2g29190.1 68415.m03548 pumilio/Puf RNA-binding domain-containing
protein
Length = 972
Score = 26.2 bits (55), Expect = 9.1
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +1
Query: 271 GGSVVIECVQTGHKANIEFLTKPFYG 348
G VV +C++ + NIEF+ F+G
Sbjct: 756 GNHVVQKCIECVPEENIEFIISTFFG 781
>At2g29140.1 68415.m03542 pumilio/Puf RNA-binding domain-containing
protein
Length = 964
Score = 26.2 bits (55), Expect = 9.1
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +1
Query: 271 GGSVVIECVQTGHKANIEFLTKPFYG 348
G VV +C++ + NIEF+ F+G
Sbjct: 748 GNHVVQKCIECVPEENIEFIISTFFG 773
>At1g76920.1 68414.m08954 F-box family protein (FBX3) contains
similarity to stamina pistilloidia GI:4101570, the pea
ortholog of Fim and UFO from [Pisum sativum]
Length = 374
Score = 26.2 bits (55), Expect = 9.1
Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 4/36 (11%)
Frame = +1
Query: 142 RPVHRSPQHRQ-GHGHAHRSRRGVHFDIP---QWLR 237
RP H HR G+GHA R +H P QW R
Sbjct: 61 RPPHHHHSHRHSGNGHATNIRPYIHVYDPEQNQWFR 96
>At1g13350.1 68414.m01550 protein kinase family protein contains
protein kinase domain, Pfam:PF00069 (likely that this
cDNA contains a single unspliced intron. Putative intron
removed in this gene model.)
Length = 761
Score = 26.2 bits (55), Expect = 9.1
Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = +1
Query: 109 RSLGVDEEQIPRPV-HRSPQHRQGHGHAHRSRRGVHFD 219
RS +E P H+S H + HGH H V ++
Sbjct: 16 RSFSPSDEVFKSPKRHKSRHHHRRHGHRHHRDEEVQYN 53
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,752,507
Number of Sequences: 28952
Number of extensions: 239732
Number of successful extensions: 784
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 741
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 776
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 655255392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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