Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0121
(703 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_55359| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 5e-07
SB_46349| Best HMM Match : Lectin_C (HMM E-Value=3.2e-06) 43 3e-04
SB_56272| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_9329| Best HMM Match : Lectin_C (HMM E-Value=0) 40 0.003
SB_48103| Best HMM Match : Lectin_C (HMM E-Value=5.2e-36) 39 0.003
SB_24224| Best HMM Match : Lectin_C (HMM E-Value=0) 38 0.010
SB_7361| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.010
SB_55360| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.014
SB_50620| Best HMM Match : Lectin_C (HMM E-Value=2.1e-14) 36 0.032
SB_59678| Best HMM Match : Lectin_C (HMM E-Value=3.3e-19) 35 0.056
SB_43077| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.097
SB_47980| Best HMM Match : EGF_CA (HMM E-Value=7.6e-20) 34 0.13
SB_28600| Best HMM Match : EGF_CA (HMM E-Value=4.2e-40) 33 0.17
SB_40808| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_56842| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.52
SB_24529| Best HMM Match : Lectin_C (HMM E-Value=3.4e-27) 31 0.68
SB_17120| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.68
SB_52913| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.90
SB_41711| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_48878| Best HMM Match : Fibrinogen_C (HMM E-Value=0) 30 1.6
SB_42813| Best HMM Match : Lectin_C (HMM E-Value=4.8e-21) 29 2.8
SB_49003| Best HMM Match : Lectin_C (HMM E-Value=1e-09) 29 2.8
SB_48345| Best HMM Match : Ribosomal_L22 (HMM E-Value=0) 29 2.8
SB_37000| Best HMM Match : Astacin (HMM E-Value=5.5e-19) 29 3.6
SB_16677| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_44272| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_49537| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_40810| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_52733| Best HMM Match : DUF948 (HMM E-Value=0.37) 28 6.4
SB_58178| Best HMM Match : UBACT (HMM E-Value=1.7e-34) 28 6.4
SB_38168| Best HMM Match : Lectin_C (HMM E-Value=7.9e-06) 28 6.4
SB_36763| Best HMM Match : EGF (HMM E-Value=1.7e-06) 28 6.4
SB_6863| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_52330| Best HMM Match : MCM (HMM E-Value=0) 28 8.4
SB_18087| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_5545| Best HMM Match : MORN (HMM E-Value=1e-31) 28 8.4
>SB_55359| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2516
Score = 52.0 bits (119), Expect = 5e-07
Identities = 21/57 (36%), Positives = 32/57 (56%)
Frame = +2
Query: 338 IGISSQMAKGVFETVDGVSIMDVYNKWKPGEPNDSHNNEDCVVIHRNDGLMNDDDCA 508
+G + + + + DG + Y W+ GEPN+ +NEDC + DGL NDDDC+
Sbjct: 51 VGFNDRANESSYNWTDGTA-KPFYTNWRRGEPNNFQDNEDCTELLYQDGLWNDDDCS 106
Score = 39.9 bits (89), Expect = 0.002
Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 4/99 (4%)
Frame = +2
Query: 230 EDLRNGGGSFFYPDDKFEFDAVTTYWNT-SQPFEWISIGISSQMAKGVFETV-DGVSIMD 403
+D GG D+ E ++ T + WI G++ + +G + D +
Sbjct: 148 QDCHQSGGYLVKVDNSDEQHFLSYMMKTVMKQAAWI--GLNDRAIEGTYVWEGDNTKLGQ 205
Query: 404 VYNKWKPGEPNDSHNNEDCVVIHRND--GLMNDDDCANL 514
Y+ W GEPND + EDC+ ++ G NDD C L
Sbjct: 206 NYSHWYSGEPNDHASVEDCISMYSGSLGGFWNDDYCDTL 244
Score = 39.5 bits (88), Expect = 0.003
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +2
Query: 323 FEW-ISIGISSQMAKGVFETVDGVSIMDVYNKWKPGEPNDSHNNEDCVVIHRNDGLMNDD 499
+ W + IG++ +GV DG + Y W EPN+ + EDC + R DG ND
Sbjct: 1500 YYWTVWIGLNDLGTEGVNTWSDGSPMS--YINWGNKEPNNWNGMEDCGEMSRFDGRWNDQ 1557
Query: 500 DCANLSHLY-ARKH 538
+C NL + RKH
Sbjct: 1558 NC-NLKRTFVCRKH 1570
Score = 34.7 bits (76), Expect = 0.073
Identities = 29/91 (31%), Positives = 40/91 (43%), Gaps = 5/91 (5%)
Frame = +2
Query: 278 FEFDAVTTYWNTSQPFEWISIGISSQMAKGVFETVDGVSIMDVYNKWKPGEPNDSHNNED 457
+E VT+ TS + IG++ +G++ DG S +D + W GEPND
Sbjct: 1218 WESALVTSLLVTSWDAGDVWIGLTDTNQRGMYRWTDG-SPVD-WTHWWNGEPNDRGITGS 1275
Query: 458 CV-----VIHRNDGLMNDDDCANLSHLYARK 535
CV V R+ D DC SH Y K
Sbjct: 1276 CVRATMTVSSRDWMYWVDSDCTENSHAYVCK 1306
Score = 32.7 bits (71), Expect = 0.30
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +1
Query: 574 PNTDYAYSDVLGRCYKMYLTPMTWSEAYRVCSADQSYLAIIN 699
P+ YS CY MY + W EA VC D + L I+
Sbjct: 1730 PDCPSGYSKYGESCYLMYYNKLNWKEAGEVCQKDGAQLISIH 1771
Score = 32.3 bits (70), Expect = 0.39
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +2
Query: 341 GISSQMAKGVFETVDGVSIMDVYNKWKPGEPNDSHNNEDCVVIHRNDGLMNDDDCA 508
G++ + +G ++ DG + Y W GEPND E+C + + L ND C+
Sbjct: 1861 GLNDRNIEGGWQWSDGSPL--AYVAWNGGEPNDLVGVENCGEMVAGNRLWNDYSCS 1914
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 383 DGVSIMDVYNKWKPGEPNDSHNNEDCVVIHRNDGLMNDDDC 505
DG + + +W P EP DSH+ + V+ ++ G D C
Sbjct: 1386 DGTPVQ--FTRWGPAEP-DSHSGQQPCVVLKSTGYWGDVGC 1423
Score = 27.9 bits (59), Expect = 8.4
Identities = 19/64 (29%), Positives = 27/64 (42%)
Frame = +1
Query: 508 ESFPFICKKTLASLEWNVNCDIPNTDYAYSDVLGRCYKMYLTPMTWSEAYRVCSADQSYL 687
+ + FICK A L +CD + Y S CYK + TW A + C YL
Sbjct: 107 KEYSFICKTLKAPL----SCDAGWSQYGAS-----CYKFSTSSKTWLIAQQDCHQSGGYL 157
Query: 688 AIIN 699
++
Sbjct: 158 VKVD 161
>SB_46349| Best HMM Match : Lectin_C (HMM E-Value=3.2e-06)
Length = 76
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/58 (37%), Positives = 32/58 (55%)
Frame = +2
Query: 338 IGISSQMAKGVFETVDGVSIMDVYNKWKPGEPNDSHNNEDCVVIHRNDGLMNDDDCAN 511
IG + + ++G F VDG + + W+ GEPN+ NEDC N G ND+ C+N
Sbjct: 11 IGFNDRGSEGNFSWVDGSN--SSFKNWRKGEPNN-WQNEDCAEAVWNTGQWNDELCSN 65
>SB_56272| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 162
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +2
Query: 365 GVFETVDGVSIMDVYNKWKPGEPNDSHNNEDCVVIHRNDGLMNDDDCANL 514
G F D ++ + W GEPN+ E CV ++ GL ND C+NL
Sbjct: 21 GSFRWTDNSNL--TFRNWNSGEPNNYEGQEKCVELYVRSGLWNDVKCSNL 68
>SB_9329| Best HMM Match : Lectin_C (HMM E-Value=0)
Length = 577
Score = 39.5 bits (88), Expect = 0.003
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = +2
Query: 329 WISIGISSQMAKGVFETVDGVSIMDVYNKWKPGEPNDSHNNEDCVVIHRNDGLMNDDDC 505
WI G++ + + +E DG + + W G+PND ++CV + G ND +C
Sbjct: 358 WIWTGLNDRSVERGYEWSDGSPVS--FTSWLYGQPNDHWGRDNCVAVQTRMGSWNDVNC 414
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +1
Query: 574 PNTDYAYSDVLGRCYKMYLTPMTWSEAYRVCSADQSYLAIINT 702
P+ YS CY+M + WSEA VC + L I++
Sbjct: 154 PDCPRFYSKYGDSCYRMSYIKLPWSEAREVCKKEGGDLVSIHS 196
>SB_48103| Best HMM Match : Lectin_C (HMM E-Value=5.2e-36)
Length = 137
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/58 (36%), Positives = 30/58 (51%)
Frame = +2
Query: 332 ISIGISSQMAKGVFETVDGVSIMDVYNKWKPGEPNDSHNNEDCVVIHRNDGLMNDDDC 505
I IG++ + V+E DG + WK EPND EDC+ + R +G ND+ C
Sbjct: 69 IWIGLNDLDDESVYEWSDGSPLSYTNYNWK--EPNDWQGQEDCLEMVRWNGKWNDNQC 124
>SB_24224| Best HMM Match : Lectin_C (HMM E-Value=0)
Length = 2726
Score = 37.5 bits (83), Expect = 0.010
Identities = 24/99 (24%), Positives = 38/99 (38%)
Frame = +2
Query: 239 RNGGGSFFYPDDKFEFDAVTTYWNTSQPFEWISIGISSQMAKGVFETVDGVSIMDVYNKW 418
++ GG F + +E + + N W+ G Q A G + DG VY W
Sbjct: 1364 QSAGGDLFSVTNAYEQRFLENFTNIES---WL--GYRDQKAAGTWRWSDGSK--SVYTDW 1416
Query: 419 KPGEPNDSHNNEDCVVIHRNDGLMNDDDCANLSHLYARK 535
+D DCVV+ +G D CA + ++
Sbjct: 1417 DSSAKDDHDLGMDCVVLDAEEGKWRDSSCAEKNSFLCKR 1455
>SB_7361| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 831
Score = 37.5 bits (83), Expect = 0.010
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +2
Query: 338 IGISSQMAKGVFETVDGVSIMDVYNKWKPGEPNDSHNNEDCV-VIHRNDGLMNDDDCANL 514
+G+S +G F DG S M+ N W P +PND + N+DCV + N G +D +
Sbjct: 323 VGLSDVATEGRFVWADG-SPMNFTN-WAPNQPND-YKNQDCVHTLGVNYGYEWNDVQCSA 379
Query: 515 SHLYARKHWLHSSGM 559
H Y K L+ G+
Sbjct: 380 CHNYTCKRDLNECGV 394
>SB_55360| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1646
Score = 37.1 bits (82), Expect = 0.014
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = +2
Query: 338 IGISSQMAKGVFETVDGVSIMDVYNKWKPGEPNDSHNNEDCVVIHRN--DGLMNDDDCAN 511
IG + + A+G F +G + Y W GEPND EDCV + G ND+ C
Sbjct: 852 IGATDEAAEGHF-VWEGDGTVVNYTNWFRGEPNDHSGKEDCVEMMAGYFAGYWNDNFCEQ 910
Query: 512 LSHLYARK 535
+ K
Sbjct: 911 FRNFICEK 918
>SB_50620| Best HMM Match : Lectin_C (HMM E-Value=2.1e-14)
Length = 620
Score = 35.9 bits (79), Expect = 0.032
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +1
Query: 607 GRCYKMYLTPMTWSEAYRVCSADQSYLAIINT 702
GRCYK+ + P TW+ A C ++ S+L I +
Sbjct: 20 GRCYKVVIKPSTWAHAQSACRSNDSHLIKITS 51
>SB_59678| Best HMM Match : Lectin_C (HMM E-Value=3.3e-19)
Length = 951
Score = 35.1 bits (77), Expect = 0.056
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +1
Query: 592 YSDVLGRCYKMYLTPMTWSEAYRVCSADQSYLAIINT 702
Y ++ G CYK ++T TW A+ C+ + S L +++
Sbjct: 125 YVEIRGSCYKFHMTKDTWINAFHECTRENSTLLSVHS 161
>SB_43077| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1149
Score = 34.3 bits (75), Expect = 0.097
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +2
Query: 338 IGISSQMAKGVFETVDGVSIMDVYNKWKPGEPNDSHNNEDCV-VIHRNDGL-MNDDDCAN 511
+G+S ++G F DG + W P +PND + N+DCV + N G ND C++
Sbjct: 678 VGLSDVTSEGRFVWADGSPTN--FTNWAPNQPND-YKNQDCVHTLGVNYGYKWNDVQCSS 734
Query: 512 LSHLYARK 535
H Y K
Sbjct: 735 -CHNYTCK 741
>SB_47980| Best HMM Match : EGF_CA (HMM E-Value=7.6e-20)
Length = 591
Score = 33.9 bits (74), Expect = 0.13
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +2
Query: 338 IGISSQMAKGVFETVDGVSIMDVYNKWKPGEPNDSHNNEDCV-VIHRNDGL-MNDDDCA 508
+G+S +G F DG + W P +PND + N+DCV + N G ND C+
Sbjct: 101 VGLSDVTTEGRFVWADGSPTN--FTNWAPNQPND-YKNQDCVHTLGENYGYKWNDVQCS 156
>SB_28600| Best HMM Match : EGF_CA (HMM E-Value=4.2e-40)
Length = 1042
Score = 33.5 bits (73), Expect = 0.17
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +2
Query: 338 IGISSQMAKGVFETVDGVSIMDVYNKWKPGEPNDSHNNEDCV-VIHRNDGLMNDDDCANL 514
+G+S +G F DG + W P +PND + N+DCV + N G +D
Sbjct: 652 VGLSDVTTEGQFVWADGSPTN--FTNWAPNQPND-YKNQDCVHTLGVNYGYKWNDVPCTA 708
Query: 515 SHLYARK 535
H Y K
Sbjct: 709 CHNYTCK 715
>SB_40808| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 309
Score = 33.1 bits (72), Expect = 0.22
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +1
Query: 583 DYAYSDVLGRCYKMYLTPMTWSEAYRVCSADQSYLAIIN 699
D++Y + G+C++ + P TW EA+ C + + LA I+
Sbjct: 124 DWSYFN--GKCFRYFSEPKTWEEAHGFCQGNGAKLATID 160
>SB_56842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 334
Score = 31.9 bits (69), Expect = 0.52
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +2
Query: 338 IGISSQMAKGVFETVDGVSIMDVYNKWKPGEPNDSHNNEDCVVIHRNDGLMNDDDC 505
IG+ + F VDG + Y + G+ + S ++ CV + + DG DDDC
Sbjct: 266 IGLIRKEDDHTFHWVDGTPVD--YTNFASGQHDRSGRSKACVYMRQTDGKWVDDDC 319
>SB_24529| Best HMM Match : Lectin_C (HMM E-Value=3.4e-27)
Length = 644
Score = 31.5 bits (68), Expect = 0.68
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +2
Query: 338 IGISSQMAKGVFETVDGVSIMDVYNKWKPGEPNDSHNNEDCV-VIHRNDGLMNDDDCANL 514
+G+S +G F DG + W P +PN+ + N+DCV + N G +D +
Sbjct: 309 VGLSDVATEGRFVWADGSPTN--FTNWAPNQPNE-YKNQDCVHTLGVNYGYEWNDVQCSA 365
Query: 515 SHLYARK 535
H Y K
Sbjct: 366 CHNYTCK 372
>SB_17120| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 399
Score = 31.5 bits (68), Expect = 0.68
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +1
Query: 508 ESFPFICKKTLASLEWNVNCDIPNTDYAYSDVLGRCYKMYLTPMTWSEAYRVCSADQ 678
ES+P + KK + +EW N + P DY CY +TW ++Y V +A Q
Sbjct: 168 ESYPNLYKKMVLGIEWPQN-NCP-ADYILK-TDDDCYVSVQALITWLDSYHVINASQ 221
>SB_52913| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 31.1 bits (67), Expect = 0.90
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +2
Query: 446 NNEDCVVIHRNDGLMNDDDCANLSHLYARKHWLHSSGM*IVTFL 577
N E H++ GLM D HLY W+ S+G+ + FL
Sbjct: 91 NIESVANTHQSSGLMVHDSPHEKMHLYVELAWIFSTGLGTLLFL 134
>SB_41711| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1662
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/58 (25%), Positives = 28/58 (48%)
Frame = +2
Query: 338 IGISSQMAKGVFETVDGVSIMDVYNKWKPGEPNDSHNNEDCVVIHRNDGLMNDDDCAN 511
IG++ + F DG S+ + +W +P+D+ ++DC + + D CAN
Sbjct: 1594 IGLNDLKNEKAFVWSDGTSVD--FTQWAFNKPSDNGKDKDCTYLLKQSKTWIDFSCAN 1649
>SB_48878| Best HMM Match : Fibrinogen_C (HMM E-Value=0)
Length = 1213
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +2
Query: 338 IGISSQMAKGVFETVDGVSIMDVYNKWKPGEPNDSHNNEDCVV 466
IG++ A+G +E DG Y KW GEPN N + V+
Sbjct: 812 IGLNDNRAEGEWEWHDGTRAK--YVKWITGEPNGGTANNNAVL 852
>SB_42813| Best HMM Match : Lectin_C (HMM E-Value=4.8e-21)
Length = 276
Score = 29.5 bits (63), Expect = 2.8
Identities = 26/94 (27%), Positives = 36/94 (38%), Gaps = 4/94 (4%)
Frame = +2
Query: 248 GGSFFYPDDKFEFDAVTTYWNTSQPFEWISIGISSQMAKGVFETVDGVSIMDVYNKWKPG 427
G Y +D+ EF + IG+ S + DG + KW G
Sbjct: 159 GAMLAYIEDEEEFQFLRRSRPPGSSTNQYFIGLRSANDSKTWLWPDGTKAK--FFKWAKG 216
Query: 428 EPND-SHNNEDCVVI---HRNDGLMNDDDCANLS 517
EPN+ N EDCV + ++G ND C S
Sbjct: 217 EPNNYQGNTEDCVAMDFRSLSNGSYNDVLCQESS 250
>SB_49003| Best HMM Match : Lectin_C (HMM E-Value=1e-09)
Length = 130
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +2
Query: 338 IGISSQMAKGVFETVDGVSIMDVYNKWKPGEPNDSHNNEDCVVIHRND-GLMNDDDC 505
+G++ + +G F D Y + PG PN ++ DCVV +D G D C
Sbjct: 64 LGLNDKTTEGNFFWQDSEPAS--YQNFAPGHPNSPGDDTDCVVARDSDEGKWADTKC 118
>SB_48345| Best HMM Match : Ribosomal_L22 (HMM E-Value=0)
Length = 142
Score = 29.5 bits (63), Expect = 2.8
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 303 IGTRHNPSNGSVSGSHRRWPKESSKLLM 386
+G + N V GS RWPK+S+++L+
Sbjct: 67 VGRKAQAKNLKVPGSQGRWPKKSAEILL 94
>SB_37000| Best HMM Match : Astacin (HMM E-Value=5.5e-19)
Length = 1341
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = +2
Query: 308 NTSQPFEWISIGISSQMAKGVFETVDGVSIMDVYNKWKPGEPNDS--HNNEDC 460
N Q + IG + + +G +E D + + W P EPN+ NEDC
Sbjct: 1200 NAVQDGNSVWIGFNDKGREGRWEWTDRSPV--TFKNWSPNEPNNGGFRENEDC 1250
Score = 27.9 bits (59), Expect = 8.4
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 604 LGRCYKMYLTPMTWSEAYRVC 666
+ CYK+ T M+WS+A C
Sbjct: 1158 INHCYKLVETTMSWSDAEEAC 1178
>SB_16677| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 325
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +1
Query: 604 LGRCYKMYL-TPMTWSEAYRVCSADQSYLAIINT 702
L +CY+ +L + + W+EA RVC + + N+
Sbjct: 205 LDKCYRFFLDSHVRWAEASRVCHVHGGVMGVFNS 238
>SB_44272| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1128
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +2
Query: 401 DVYNKWKPGEPNDSHNNEDCVVIHRNDGLMN 493
D W PGE DSH ++D V I + MN
Sbjct: 402 DTETDWTPGEWKDSHEDDDYVNISIYNDAMN 432
>SB_49537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 195
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +2
Query: 332 ISIGISSQMAKGVFETVDGVSIMDVYNKWKPGEPNDS--HNNED 457
IS I ++ G VDG+ +DV++ WK EP DS H E+
Sbjct: 9 ISANIGTKAGTGPPLEVDGIDKLDVHHIWK--EPGDSKAHTEEN 50
>SB_40810| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 210
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 10/57 (17%)
Frame = +2
Query: 329 WISIGISSQMAKGVFETV--DGVSIMDVYNKWKPGEPNDSH--------NNEDCVVI 469
WI + ++ V+ V D S Y +W GEPND H EDCV I
Sbjct: 75 WIGLNDRAEAGTYVWNDVGVDQFSNKATYFRWDTGEPNDKHYDRLLPRCTGEDCVQI 131
>SB_52733| Best HMM Match : DUF948 (HMM E-Value=0.37)
Length = 1147
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -1
Query: 496 IVHKSVISMDDDAIFVVMRVVGLARLPFVIHVHY 395
+V + I +D A F++ RV+ L R PF + +Y
Sbjct: 266 LVKREKILNEDKASFIIRRVIILRRTPFRMRAYY 299
>SB_58178| Best HMM Match : UBACT (HMM E-Value=1.7e-34)
Length = 1236
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = -2
Query: 393 ETPSTVSKTPLAICDEIPILIHSKGCDVFQ*VVTASNSNLSS 268
++ +T + TP C+++ ++IH +GC V Q + N +L S
Sbjct: 899 QSGTTGNPTPSPSCNDLRVIIHVEGC-VHQHALLVRNRSLDS 939
>SB_38168| Best HMM Match : Lectin_C (HMM E-Value=7.9e-06)
Length = 583
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 607 GRCYKMYLTPMTWSEAYRVCSADQSYLAIIN 699
G+CY TW++ R C + LAIIN
Sbjct: 103 GKCYHYSSFEETWTQGQRYCLDQDADLAIIN 133
>SB_36763| Best HMM Match : EGF (HMM E-Value=1.7e-06)
Length = 155
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 4/34 (11%)
Frame = +2
Query: 416 WKPGEPNDSHNNEDCVVIH----RNDGLMNDDDC 505
W EPN+ +N+DCV I+ G ND+ C
Sbjct: 7 WAAREPNNRGSNQDCVEIYIKRPSEAGKWNDEPC 40
>SB_6863| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 182
Score = 27.9 bits (59), Expect = 8.4
Identities = 20/74 (27%), Positives = 31/74 (41%)
Frame = +2
Query: 305 WNTSQPFEWISIGISSQMAKGVFETVDGVSIMDVYNKWKPGEPNDSHNNEDCVVIHRNDG 484
WNT Q +S + ++GV + V + + +W P + ++CV H
Sbjct: 48 WNTEQGVLHGGESLSDRNSEGVMK-VKATRVAETAGRW----PWKLESAKECVTTHLPKQ 102
Query: 485 LMNDDDCANLSHLY 526
L D A SHLY
Sbjct: 103 LALKMDGAQASHLY 116
>SB_52330| Best HMM Match : MCM (HMM E-Value=0)
Length = 368
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/46 (26%), Positives = 18/46 (39%)
Frame = +1
Query: 565 CDIPNTDYAYSDVLGRCYKMYLTPMTWSEAYRVCSADQSYLAIINT 702
C+ D D+ K +TP W + Y + Y IIN+
Sbjct: 20 CEFGGKDLDGDDMTAEAIKKQMTPQEWQKIYEMSRDKNLYQNIINS 65
>SB_18087| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 121
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +2
Query: 434 NDSHNNEDCVVIHRNDGLMNDDDC 505
ND+++ +DC+V + ND ND DC
Sbjct: 67 NDNNSGDDCIV-NDNDNHDNDGDC 89
>SB_5545| Best HMM Match : MORN (HMM E-Value=1e-31)
Length = 186
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/23 (52%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
Frame = +2
Query: 218 GGR*EDLRNGGGSFFYPD-DKFE 283
GG ED RNG G+++YP+ D +E
Sbjct: 92 GGWVEDRRNGHGTYYYPNGDTYE 114
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,370,954
Number of Sequences: 59808
Number of extensions: 486691
Number of successful extensions: 1434
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1280
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1430
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1841633001
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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