Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0121
(703 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z74030-4|CAA98436.1| 113|Caenorhabditis elegans Hypothetical pr... 34 0.11
U00052-1|AAK95880.2| 308|Caenorhabditis elegans Hypothetical pr... 34 0.11
Z68159-1|CAA92283.1| 339|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z93779-1|CAB07849.2| 2103|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z78543-7|CAB01757.2| 2103|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z66566-5|CAA91487.2| 2103|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z35598-4|CAA84653.1| 488|Caenorhabditis elegans Hypothetical pr... 29 2.4
U58752-8|AAB00670.1| 308|Caenorhabditis elegans C-type lectin p... 29 2.4
AF040661-15|AAG24219.1| 174|Caenorhabditis elegans Hypothetical... 29 2.4
Z35663-16|CAA84726.2| 462|Caenorhabditis elegans Hypothetical p... 29 4.3
Z35598-6|CAA84654.1| 580|Caenorhabditis elegans Hypothetical pr... 29 4.3
AC006775-2|AAF60621.2| 557|Caenorhabditis elegans Hypothetical ... 29 4.3
AC006775-1|AAF60622.2| 551|Caenorhabditis elegans Hypothetical ... 29 4.3
Z93778-3|CAB07846.1| 446|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z35598-5|CAA84652.1| 628|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z35598-3|CAA84655.3| 525|Caenorhabditis elegans Hypothetical pr... 28 5.6
U88169-11|AAB42238.2| 308|Caenorhabditis elegans C-type lectin ... 28 5.6
AF045646-4|AAK29837.2| 295|Caenorhabditis elegans Hypothetical ... 28 5.6
AF045646-3|AAK29836.2| 432|Caenorhabditis elegans Hypothetical ... 28 5.6
Z22179-5|CAA80162.2| 786|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 27 9.8
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 27 9.8
AC024817-18|AAK68533.1| 342|Caenorhabditis elegans C-type lecti... 27 9.8
>Z74030-4|CAA98436.1| 113|Caenorhabditis elegans Hypothetical
protein D1054.7 protein.
Length = 113
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +2
Query: 371 FETVDGVSIMDVYNKWKPGEPNDSHNNEDCVVIHRNDGLMNDDDCA 508
FE DG + W+ GEPN++ + EDC+ + G + D C+
Sbjct: 55 FEWTDGSTTGTDGFIWETGEPNNASSMEDCIAVDAVTGGLGDQLCS 100
>U00052-1|AAK95880.2| 308|Caenorhabditis elegans Hypothetical
protein K02F3.5 protein.
Length = 308
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +2
Query: 338 IGISSQMAKGVFETVDGVSIMDVYNKWKPGEPNDSHNNEDCVVIHRNDGLMNDDDC 505
IG++ + VF DG + D Y KW +P++ +NE+CV + + G D C
Sbjct: 244 IGVNDIQKENVFRNSDGTPV-DFY-KWGKKQPDNQEHNENCVEVD-HSGQWTDKLC 296
>Z68159-1|CAA92283.1| 339|Caenorhabditis elegans Hypothetical
protein C33D9.2 protein.
Length = 339
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 592 YSDVLGRCYKMYLTPMTWSEAYRVCS 669
Y +LG+CYK+Y T+ EA CS
Sbjct: 97 YWQILGKCYKVYDGKFTYKEAEDTCS 122
>Z93779-1|CAB07849.2| 2103|Caenorhabditis elegans Hypothetical protein
T25C12.3 protein.
Length = 2103
Score = 29.5 bits (63), Expect = 2.4
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +2
Query: 392 SIMDVYNKWKPGEPNDSHNNEDCVVIHR 475
++++ KW+P +PND+ NN + HR
Sbjct: 1224 AVINSNGKWEPADPNDAANNFAACMKHR 1251
>Z78543-7|CAB01757.2| 2103|Caenorhabditis elegans Hypothetical protein
T25C12.3 protein.
Length = 2103
Score = 29.5 bits (63), Expect = 2.4
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +2
Query: 392 SIMDVYNKWKPGEPNDSHNNEDCVVIHR 475
++++ KW+P +PND+ NN + HR
Sbjct: 1224 AVINSNGKWEPADPNDAANNFAACMKHR 1251
>Z66566-5|CAA91487.2| 2103|Caenorhabditis elegans Hypothetical protein
T25C12.3 protein.
Length = 2103
Score = 29.5 bits (63), Expect = 2.4
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +2
Query: 392 SIMDVYNKWKPGEPNDSHNNEDCVVIHR 475
++++ KW+P +PND+ NN + HR
Sbjct: 1224 AVINSNGKWEPADPNDAANNFAACMKHR 1251
>Z35598-4|CAA84653.1| 488|Caenorhabditis elegans Hypothetical
protein F10F2.6 protein.
Length = 488
Score = 29.5 bits (63), Expect = 2.4
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Frame = +1
Query: 508 ESFPFICKKTLASLEWNVNCDIPNTDYAYS---DVLGRCYKMYLTPMTWSEAYRVCSADQ 678
E+ PF AS E+ C+ T S + GRCYK+ T MT +A C Q
Sbjct: 72 ENVPFHITNAKAS-EYKTTCEAEATLICKSGWVQMFGRCYKITKTMMTRDKAEEHCKNQQ 130
Query: 679 SYLAII 696
+ I
Sbjct: 131 DQTSTI 136
>U58752-8|AAB00670.1| 308|Caenorhabditis elegans C-type lectin
protein 52 protein.
Length = 308
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = +1
Query: 517 PFICKKTLASLEWNVNCDIPN---TDYAYSDVLGRCYKMYLTPMTWSEAYRVCSADQSYL 687
PFIC + +++ IP+ + Y + ++ CYK + +++A C AD L
Sbjct: 144 PFICSASASAMPTFPAVTIPSHCPSGYTWFELTDFCYKNTVQYTNFNDARSACQADGGDL 203
Query: 688 AIINT 702
A I++
Sbjct: 204 ASIHS 208
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 159 YTYIESTESFYKIHTLYKKWVDAKKTCEMEG 251
YT+ E T+ YK Y + DA+ C+ +G
Sbjct: 170 YTWFELTDFCYKNTVQYTNFNDARSACQADG 200
>AF040661-15|AAG24219.1| 174|Caenorhabditis elegans Hypothetical
protein W10G11.12 protein.
Length = 174
Score = 29.5 bits (63), Expect = 2.4
Identities = 10/37 (27%), Positives = 19/37 (51%)
Frame = +2
Query: 416 WKPGEPNDSHNNEDCVVIHRNDGLMNDDDCANLSHLY 526
W+ GEPN++ + C ++ M+D C + + Y
Sbjct: 130 WRAGEPNNALGGQGCAQVYSTTNDMDDVGCGSTNQGY 166
>Z35663-16|CAA84726.2| 462|Caenorhabditis elegans Hypothetical
protein T04A8.3 protein.
Length = 462
Score = 28.7 bits (61), Expect = 4.3
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
Frame = +1
Query: 505 CE-SFPFICKKTLASLEWNVNCDIPNTDYAYS---DVLGRCYKMYLTPMTWSEAYRVCSA 672
CE + P+ AS E+ C+ T S + GRCYK+ T MT +A C
Sbjct: 53 CEDNVPYHINNAEAS-EYKTTCEAEATLICKSGWVQMFGRCYKITKTMMTRDKAEEHCKN 111
Query: 673 DQSYLAII 696
Q + + I
Sbjct: 112 QQDHTSTI 119
>Z35598-6|CAA84654.1| 580|Caenorhabditis elegans Hypothetical
protein F10F2.8 protein.
Length = 580
Score = 28.7 bits (61), Expect = 4.3
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
Frame = +1
Query: 505 CE-SFPFICKKTLASLEWNVNCDIPNTDYAYS---DVLGRCYKMYLTPMTWSEAYRVCSA 672
CE + P+ AS E+ C+ T S + GRCYK+ T MT +A C
Sbjct: 71 CEDNVPYHINNAEAS-EYKTTCEAEATLICKSGWVQMFGRCYKITKTMMTRDKAEEHCKN 129
Query: 673 DQSYLAII 696
Q + + I
Sbjct: 130 QQDHTSTI 137
>AC006775-2|AAF60621.2| 557|Caenorhabditis elegans Hypothetical
protein Y46H3B.1 protein.
Length = 557
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +2
Query: 380 VDGVSIMDVYNKWKPGEPNDSHNNEDCVVIHRNDGLMNDDDC 505
++G + Y W+ G P D+ + DCV + ND + DC
Sbjct: 504 INGDTYDSSYQNWRSGYPRDA-DGCDCVALVINDNSWVNTDC 544
>AC006775-1|AAF60622.2| 551|Caenorhabditis elegans Hypothetical
protein Y46H3B.2 protein.
Length = 551
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +2
Query: 380 VDGVSIMDVYNKWKPGEPNDSHNNEDCVVIHRNDGLMNDDDC 505
++G + Y W+ G P D+ + DCV + ND + DC
Sbjct: 492 INGDTYDSSYQNWRSGYPRDA-DGCDCVALVINDNSWVNTDC 532
>Z93778-3|CAB07846.1| 446|Caenorhabditis elegans Hypothetical
protein C31H5.6 protein.
Length = 446
Score = 28.3 bits (60), Expect = 5.6
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +2
Query: 488 MNDDDCANLSHLYARKHWLH 547
++DD L +Y +KHW+H
Sbjct: 121 LSDDSGTKLDEMYIKKHWMH 140
>Z35598-5|CAA84652.1| 628|Caenorhabditis elegans Hypothetical
protein F10F2.7 protein.
Length = 628
Score = 28.3 bits (60), Expect = 5.6
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Frame = +1
Query: 508 ESFPFICKKTLASLEWNVNCDIPNTDYAYS---DVLGRCYKMYLTPMTWSEAYRVCSADQ 678
E+ P+ AS E+ C+ T S + GRCYK+ T MT +A C Q
Sbjct: 109 ETVPYHINNPKAS-EYKTTCEAEATLICKSGWVQMFGRCYKITKTMMTRDKAEEHCKNQQ 167
Query: 679 SYLAII 696
+ I
Sbjct: 168 DQTSTI 173
>Z35598-3|CAA84655.3| 525|Caenorhabditis elegans Hypothetical
protein F10F2.5 protein.
Length = 525
Score = 28.3 bits (60), Expect = 5.6
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
Frame = +1
Query: 505 CE-SFPFICKKTLASLEWNVNCDIPNTDYAYS---DVLGRCYKMYLTPMTWSEAYRVCSA 672
CE + P+ AS E+ C+ T S + GRCYK+ T MT +A + C
Sbjct: 65 CEDNVPYHINNAEAS-EYKTTCEAEATLICKSGWVQMFGRCYKITKTMMTRDKAEKHCKN 123
Query: 673 DQSYLAII 696
Q + I
Sbjct: 124 QQDQTSTI 131
>U88169-11|AAB42238.2| 308|Caenorhabditis elegans C-type lectin
protein 53 protein.
Length = 308
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +3
Query: 159 YTYIESTESFYKIHTLYKKWVDAKKTCEMEG 251
YT+ E+T+ YK + + DA+ C+ +G
Sbjct: 170 YTWFETTDFCYKTTVQFTNFNDARSACQADG 200
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Frame = +1
Query: 517 PFICKKTLASLEWNVNCDIPN---TDYAYSDVLGRCYKMYLTPMTWSEAYRVCSADQSYL 687
PFIC + IP+ + Y + + CYK + +++A C AD L
Sbjct: 144 PFICSAAATVVPTCPTITIPSHCPSGYTWFETTDFCYKTTVQFTNFNDARSACQADGGDL 203
Query: 688 AIINT 702
A I++
Sbjct: 204 ASIHS 208
>AF045646-4|AAK29837.2| 295|Caenorhabditis elegans Hypothetical
protein F56B3.2b protein.
Length = 295
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = -1
Query: 679 IDQHCTPCMLRTRS*GSNTSCSIGQVHRCMRSRC*ECHNS 560
+D HC P + SN C G+ CM+ +C +C +
Sbjct: 134 VDYHCMPRGQLNSACTSNAQCGGGEGMECMKGQC-QCQQN 172
>AF045646-3|AAK29836.2| 432|Caenorhabditis elegans Hypothetical
protein F56B3.2a protein.
Length = 432
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = -1
Query: 679 IDQHCTPCMLRTRS*GSNTSCSIGQVHRCMRSRC*ECHNS 560
+D HC P + SN C G+ CM+ +C +C +
Sbjct: 271 VDYHCMPRGQLNSACTSNAQCGGGEGMECMKGQC-QCQQN 309
>Z22179-5|CAA80162.2| 786|Caenorhabditis elegans Hypothetical
protein F58A4.5 protein.
Length = 786
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 565 CDIPNTDYAYSDVLGRCYKMYLTPMTWSEAYRVC 666
C I + S L C+K+Y TP ++ A R C
Sbjct: 29 CKIGTVNPLASTSLNACFKLYNTPKSFQAARRYC 62
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +2
Query: 191 QNSHVI*EMGGR*ED-LRNGGGSFFYPDDKFEFDAVTTYWNTSQPFEW 331
Q+ H + GGR + L G FY D F+ V T SQP +W
Sbjct: 2010 QDRHYVLSDGGRQPNGLAFYGDRLFYADSAFDSIEVATINGDSQPPQW 2057
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +2
Query: 191 QNSHVI*EMGGR*ED-LRNGGGSFFYPDDKFEFDAVTTYWNTSQPFEW 331
Q+ H + GGR + L G FY D F+ V T SQP +W
Sbjct: 2010 QDRHYVLSDGGRQPNGLAFYGDRLFYADSAFDSIEVATINGDSQPPQW 2057
>AC024817-18|AAK68533.1| 342|Caenorhabditis elegans C-type lectin
protein 81 protein.
Length = 342
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +1
Query: 607 GRCYKMYLTPMTWSEAYRVC-SADQSY 684
GRCYK+ +T+S+A C AD Y
Sbjct: 33 GRCYKLVTQQLTYSDARGFCHQADPGY 59
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,555,199
Number of Sequences: 27780
Number of extensions: 358002
Number of successful extensions: 925
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 870
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 925
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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