Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0120
         (442 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   6.9  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   6.9  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    21   6.9  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    20   9.1  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    20   9.1  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -1

Query: 166 SADRFLLEGRQVKLKTVIPLRTAIST 89
           +A R  LEG +VKL+   P  T+IS+
Sbjct: 877 NAMRQELEGYKVKLEYDGPYETSISS 902


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 9/36 (25%), Positives = 16/36 (44%)
 Frame = +3

Query: 222 LYCCYFPQCSSSLKMKLVFLRIFLTQLLLIPVTNFC 329
           L+CC F   +  L   L     +   ++L+ +  FC
Sbjct: 267 LFCCAFIIFTMHLLFLLCIYYFYCALIILLCIYYFC 302


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = -1

Query: 136 QVKLKTVIPLRTAISTPPPKESFREL 59
           ++K KTV+ LR      PP      L
Sbjct: 80  EIKEKTVLSLRNTQEEEPPDPQLMRL 105


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 8/25 (32%), Positives = 9/25 (36%)
 Frame = +2

Query: 341 FNIRNASWELIGVDGPARLLNDDRW 415
           FN     W L+  D     L D  W
Sbjct: 297 FNFNPHKWLLVNFDCSTMWLKDPSW 321


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory
          receptor candidate 40 protein.
          Length = 373

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +1

Query: 7  TRSCLMSVLLFTVAIGTITL 66
          T +CL  VLL +  +G   L
Sbjct: 24 THNCLKKVLLLSQIVGVFPL 43


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,774
Number of Sequences: 336
Number of extensions: 1741
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9880622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)