Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0120
         (442 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL031627-16|CAA20968.1|  262|Caenorhabditis elegans Hypothetical...    28   2.6  
AF106575-5|AAC78171.1|  421|Caenorhabditis elegans Hypothetical ...    27   6.0  

>AL031627-16|CAA20968.1|  262|Caenorhabditis elegans Hypothetical
           protein Y102A5C.27 protein.
          Length = 262

 Score = 28.3 bits (60), Expect = 2.6
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 293 DTIITNPGDEFLCVGDFNIRNASWEL 370
           D +  N   EF  V +FN+  ASW++
Sbjct: 207 DIVAVNADGEFSVVANFNVNQASWDV 232


>AF106575-5|AAC78171.1|  421|Caenorhabditis elegans Hypothetical
           protein K04F1.12 protein.
          Length = 421

 Score = 27.1 bits (57), Expect = 6.0
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = -3

Query: 116 NSSTHSNKYPATQRIISRVIVPIATVNN 33
           NS   +  +P  QR+ SRV VPI   NN
Sbjct: 341 NSELTNVSFPEIQRVESRVYVPIVFNNN 368


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,086,037
Number of Sequences: 27780
Number of extensions: 161788
Number of successful extensions: 412
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 406
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 412
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 756625558
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)