Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0118
         (709 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    25   0.60 
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    25   0.60 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.80 
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    23   3.2  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   7.4  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   9.8  

>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = +3

Query: 519 ISHDNYCTICKLIMNCRNNYKFH 587
           +S  N C IC  +++C++  + H
Sbjct: 131 LSDPNQCVICHRVLSCKSALQMH 153


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +2

Query: 584 SQYRNSITCENPALYGGYPCYTRD*NRVI*NCVIRLPCYKG 706
           +QY +S TC  P  + G  C T D +    +C+    C  G
Sbjct: 1   NQYVDSYTCTCPLGFSGINCQTNDEDCTETSCMNGGTCIDG 41


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 0.80
 Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 7/57 (12%)
 Frame = -2

Query: 597 FLYCEIYNYFYNS*LICILY-------SNCHVKLK*IIYYICVPSFVIGKTLVILYY 448
           FL C  Y Y+    L+C+ Y          H+     IYY  VP F     L+ +YY
Sbjct: 96  FLLCTYYFYYAFIILLCVYYFYYAFIIFTVHLLFLLCIYYFVVPLFF----LLCIYY 148



 Score = 24.2 bits (50), Expect = 1.1
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -2

Query: 555 LICILYSNCHVKLK*IIYYICVPSFVIGKT 466
           L+CI Y  C + +   IYY C  +F+I  T
Sbjct: 282 LLCIYYFYCALIILLCIYYFC-RAFIIFPT 310



 Score = 22.6 bits (46), Expect = 3.2
 Identities = 17/58 (29%), Positives = 25/58 (43%)
 Frame = -2

Query: 615 FSHVILFLYCEIYNYFYNS*LICILYSNCHVKLK*IIYYICVPSFVIGKTLVILYYIR 442
           F+  +LFL C  Y Y     L+CI Y  C   +    ++ C  S    K+   L  +R
Sbjct: 275 FTMHLLFLLCIYYFYCALIILLCIYYF-CRAFIIFPTHFYCAFSLYPLKSTFYLNVVR 331


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +2

Query: 536 LYNMQINYEL*K*L*ISQYRNSITCENPALY 628
           LY +  NYE+     +  + N I+ +NPA +
Sbjct: 404 LYKLPPNYEIRHKFKLWNFNNQISDDNPARF 434


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +2

Query: 599 SITCENPALYGGYPCYTR 652
           S +CEN  LY G   Y R
Sbjct: 207 SQSCENATLYSGDEMYFR 224


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 455 YIIFVYLFVHNALYEVIQARYARI 384
           Y  F+Y   H+ L  +I +RY R+
Sbjct: 141 YCQFLYNCFHSTLLLMILSRYQRL 164


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,030
Number of Sequences: 336
Number of extensions: 3935
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)