Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0118
         (709 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK124803-1|BAC85953.1|  180|Homo sapiens protein ( Homo sapiens ...    33   1.3  
AK126213-1|BAC86488.1|  262|Homo sapiens protein ( Homo sapiens ...    30   7.1  

>AK124803-1|BAC85953.1|  180|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42813 fis, clone BRCAN2012355. ).
          Length = 180

 Score = 32.7 bits (71), Expect = 1.3
 Identities = 21/73 (28%), Positives = 36/73 (49%)
 Frame = -2

Query: 612 SHVILFLYCEIYNYFYNS*LICILYSNCHVKLK*IIYYICVPSFVIGKTLVILYYIRISI 433
           +H+ + +Y  IY Y Y    IC+ + N +V +  +  Y C+  ++   TL +  Y    +
Sbjct: 89  AHIHMCVYTYIYVYIYTHIHICV-HINMYVSIY-VYIYTCIQIYIYMYTLYVCTY--TYM 144

Query: 432 CT*RFI*SHTSAL 394
           CT   I  HTS +
Sbjct: 145 CTYIHICIHTSII 157


>AK126213-1|BAC86488.1|  262|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44225 fis, clone THYMU3006168. ).
          Length = 262

 Score = 30.3 bits (65), Expect = 7.1
 Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
 Frame = -2

Query: 672 YITRFQSLV*HGYPPYNAGFSHVILFLYCEIYNYFYNS*LICI-LYSNCHVKLK*IIYYI 496
           Y+  +  +  H Y   +A ++++ +F+Y  ++ Y Y+   ICI +Y + H        Y 
Sbjct: 88  YVYSYARVCIHMYIHIHA-YAYICIFIYTHMHTYVYSYARICIHMYIHIHA-------YA 139

Query: 495 CVPSFVIGKTLVILY-YIRISI 433
           C+  F+       +Y Y RI I
Sbjct: 140 CICMFMYAHMRAYVYSYTRICI 161


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,902,851
Number of Sequences: 237096
Number of extensions: 1899982
Number of successful extensions: 6078
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5941
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6076
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8231208258
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)