Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0117
         (687 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    24   1.0  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   7.2  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   7.2  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 12/32 (37%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = +2

Query: 494 IPIKYLNICPVGRSCNQIERD-QFSEYDSKHK 586
           +P+K ++I P+G    ++ERD  FS +  KH+
Sbjct: 58  VPVKKISIPPLGEIL-ELERDANFSLFIPKHR 88


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -1

Query: 201 CNFLARFCQRSVNIEQIQNFLL 136
           CNF  +FC R     Q  N LL
Sbjct: 542 CNFYRKFCARYSAATQDLNKLL 563


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = +3

Query: 582 TKLGTNLLKHFKASS 626
           TK+  NLLKH+++++
Sbjct: 124 TKIEINLLKHYQSTT 138


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,560
Number of Sequences: 336
Number of extensions: 3498
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)