Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0117
         (687 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1626 + 34863691-34863762,34863895-34863939,34864047-348641...    99   3e-21
07_03_0815 + 21707061-21707112,21707394-21708286,21709289-217094...    31   1.1  

>04_04_1626 +
           34863691-34863762,34863895-34863939,34864047-34864113,
           34864234-34864310,34864570-34864605,34864687-34864742,
           34864816-34864915,34864995-34865090,34865167-34865256,
           34865466-34865517,34866101-34866156
          Length = 248

 Score = 99.1 bits (236), Expect = 3e-21
 Identities = 43/86 (50%), Positives = 68/86 (79%)
 Frame = +3

Query: 255 LVSGSDYMKISEQMGGEDVVSNFNYVFSENGLVHHKNGKKLSSESIVNHLGEQKLQEVIN 434
           +V GSD +KISEQ+G + V ++++Y FSENGLV HKNG+ + ++S+ + LG+ +L+E IN
Sbjct: 45  VVGGSDLVKISEQLG-KSVTTDYDYCFSENGLVAHKNGELIGTQSLKSFLGDDQLKEFIN 103

Query: 435 FAMGYMSNIKLPVKRGNFIEFRSSIL 512
           F + Y++++ +P+KRG FIEFRS +L
Sbjct: 104 FTLHYIADLDIPIKRGTFIEFRSGML 129



 Score = 73.7 bits (173), Expect = 1e-13
 Identities = 30/58 (51%), Positives = 41/58 (70%)
 Frame = +2

Query: 509 LNICPVGRSCNQIERDQFSEYDSKHKVRHQFVEALQSKFKDSGLKFALGGQISIDVFP 682
           LN+ P+GR+C+Q ERD+F +YD  H +R + V  L+ KF    L F++GGQIS DVFP
Sbjct: 129 LNVSPIGRNCSQEERDEFEKYDKVHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFP 186



 Score = 38.7 bits (86), Expect = 0.004
 Identities = 19/37 (51%), Positives = 26/37 (70%)
 Frame = +1

Query: 145 VLYLFDVDGTLTKPRQKITEEFRRFILDEVKSKVDVG 255
           VL LFDVDGTLT PR+ +T E  +F + +++  V VG
Sbjct: 9   VLALFDVDGTLTAPRKVVTPEMLQF-MKQLREHVTVG 44


>07_03_0815 +
           21707061-21707112,21707394-21708286,21709289-21709459,
           21709880-21710143,21710404-21710421
          Length = 465

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
 Frame = -3

Query: 514 IKILDRNSMKLPLLTGNLMLD-M*PMAKFIT-SCSFCSPKWLTMLS 383
           +++   N M L  + G L L+ + P  KF+T SC FCS  WL  ++
Sbjct: 194 LRLKHLNWMNLSAVRGLLRLNAVVPRLKFLTVSCCFCSSTWLVAMA 239


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,869,547
Number of Sequences: 37544
Number of extensions: 350703
Number of successful extensions: 750
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 749
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1744894544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)