Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0116
         (690 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    21   7.2  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   7.2  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   7.2  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   9.5  

>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/31 (29%), Positives = 14/31 (45%)
 Frame = -3

Query: 202 SLLRNIYF*AAECFQFCNEQKQNEIQIYTYW 110
           S   ++ F   + F    + K N  +IY YW
Sbjct: 294 SFASDLLFILIQLFNSLRQMKNNLERIYFYW 324


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/31 (29%), Positives = 14/31 (45%)
 Frame = -3

Query: 202 SLLRNIYF*AAECFQFCNEQKQNEIQIYTYW 110
           S   ++ F   + F    + K N  +IY YW
Sbjct: 294 SFASDLLFILIQLFNSLRQMKNNLERIYFYW 324


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/31 (29%), Positives = 14/31 (45%)
 Frame = -3

Query: 202 SLLRNIYF*AAECFQFCNEQKQNEIQIYTYW 110
           S   ++ F   + F    + K N  +IY YW
Sbjct: 294 SFASDLLFILIQLFNSLRQMKNNLERIYFYW 324


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = -1

Query: 645 KAPTPPSRLWFVQPSKNIHTAEYTHDDQHFAK 550
           KA  PPS   ++ P      A +  +   FAK
Sbjct: 100 KAEVPPSNPIYIHPESPNFGAHWMKESISFAK 131


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,663
Number of Sequences: 336
Number of extensions: 4224
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)