Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0116
         (690 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78417-2|CAB01692.1|  258|Caenorhabditis elegans Hypothetical pr...    49   4e-06
Z78417-1|CAB01684.1|  255|Caenorhabditis elegans Hypothetical pr...    49   4e-06
Z72508-4|CAA96637.2|  216|Caenorhabditis elegans Hypothetical pr...    42   5e-04
AC006794-3|AAK68503.2|  192|Caenorhabditis elegans Hypothetical ...    30   1.4  
AC006615-4|AAK68233.2|  602|Caenorhabditis elegans Hypothetical ...    29   2.4  
Z83231-4|CAB05752.1|  356|Caenorhabditis elegans Hypothetical pr...    29   3.1  
Z83113-3|CAB05545.1|  479|Caenorhabditis elegans Hypothetical pr...    28   5.5  
Z66524-5|CAC70104.1|  566|Caenorhabditis elegans Hypothetical pr...    28   5.5  
Z81570-1|CAB04606.1|  749|Caenorhabditis elegans Hypothetical pr...    28   7.2  
Z68342-9|CAD91630.2|  626|Caenorhabditis elegans Hypothetical pr...    28   7.2  
AY887910-1|AAX34422.1|  749|Caenorhabditis elegans anion transpo...    28   7.2  

>Z78417-2|CAB01692.1|  258|Caenorhabditis elegans Hypothetical
           protein C35C5.3b protein.
          Length = 258

 Score = 48.8 bits (111), Expect = 4e-06
 Identities = 18/54 (33%), Positives = 31/54 (57%)
 Frame = +2

Query: 398 TMNIYYCYSCGYKKVFEDYAGIIQQKYPEISVIGANYTHLVLTCIYHELLVLAK 559
           T+ I+YC SCGYK+ F+ +    ++KYP + + GAN+  ++      + L   K
Sbjct: 97  TLRIFYCVSCGYKQAFDQFTTFAKEKYPNMPIEGANFAPVLWKAYVAQALSFVK 150



 Score = 38.3 bits (85), Expect = 0.005
 Identities = 18/60 (30%), Positives = 31/60 (51%)
 Frame = +1

Query: 511 PPGFNMYLSRIIGFGKMLVIMCILSGVNIFAWLNKPQPAWWSWCLENKLYACMMMFFLAN 690
           P  +  Y+++ + F KM V++ +L G+N F       P        NK+ +CM++F L N
Sbjct: 135 PVLWKAYVAQALSFVKMAVLVLVLGGINPFERFGLGYPQILQHAHGNKMSSCMLVFMLGN 194


>Z78417-1|CAB01684.1|  255|Caenorhabditis elegans Hypothetical
           protein C35C5.3a protein.
          Length = 255

 Score = 48.8 bits (111), Expect = 4e-06
 Identities = 18/54 (33%), Positives = 31/54 (57%)
 Frame = +2

Query: 398 TMNIYYCYSCGYKKVFEDYAGIIQQKYPEISVIGANYTHLVLTCIYHELLVLAK 559
           T+ I+YC SCGYK+ F+ +    ++KYP + + GAN+  ++      + L   K
Sbjct: 94  TLRIFYCVSCGYKQAFDQFTTFAKEKYPNMPIEGANFAPVLWKAYVAQALSFVK 147



 Score = 38.3 bits (85), Expect = 0.005
 Identities = 18/60 (30%), Positives = 31/60 (51%)
 Frame = +1

Query: 511 PPGFNMYLSRIIGFGKMLVIMCILSGVNIFAWLNKPQPAWWSWCLENKLYACMMMFFLAN 690
           P  +  Y+++ + F KM V++ +L G+N F       P        NK+ +CM++F L N
Sbjct: 132 PVLWKAYVAQALSFVKMAVLVLVLGGINPFERFGLGYPQILQHAHGNKMSSCMLVFMLGN 191


>Z72508-4|CAA96637.2|  216|Caenorhabditis elegans Hypothetical
           protein F28H7.4 protein.
          Length = 216

 Score = 41.5 bits (93), Expect = 5e-04
 Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
 Frame = +2

Query: 335 THINADSDEGSISKIGTSVG-HTMNIYYCYSCGYKKVFEDYAGIIQQKYPEISVIGANYT 511
           T +N +S    +   G S     + I YC SCGYK+ F  +    ++KYP + + G N++
Sbjct: 49  TVVNENSHSQDVVDSGFSKDLPKLTILYCVSCGYKQAFNQFYEFAKEKYPGLVIEGGNFS 108


>AC006794-3|AAK68503.2|  192|Caenorhabditis elegans Hypothetical
           protein Y50D4A.2 protein.
          Length = 192

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -3

Query: 502 SSNDRNLWVFLLYNSCIVFKYLFVATRITVIDIHCMPDT 386
           S N RNL +  +    + F  LF+   ++ I  +C+PDT
Sbjct: 99  SENSRNLKIDTVVKVFMQFSALFLLRHVSAITAYCIPDT 137


>AC006615-4|AAK68233.2|  602|Caenorhabditis elegans Hypothetical
           protein C36B7.6 protein.
          Length = 602

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +1

Query: 565 VIMCILSGVNIFAWLNKPQPAWWSWCLENKLYACMMMF 678
           V+  +L G  +++ +   Q  W+SW L N LY  ++MF
Sbjct: 452 VLFPLLVGYAVYSIIYVEQRGWYSWVL-NMLYGYLLMF 488


>Z83231-4|CAB05752.1|  356|Caenorhabditis elegans Hypothetical
           protein F57G9.4 protein.
          Length = 356

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
 Frame = +3

Query: 417 VILVATKRYLKTMQ-ELYNKNTQRFLSLELTIPTWF*HVSITNYWFWQNVG 566
           V+ +A +R + ++  E Y  NTQ F+ L LT+ + F  +S +    +Q VG
Sbjct: 138 VLAIAVERVVASVLIENYESNTQLFIPLFLTVISQFLSISTSLALLFQKVG 188


>Z83113-3|CAB05545.1|  479|Caenorhabditis elegans Hypothetical
           protein K08H10.6 protein.
          Length = 479

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
 Frame = +2

Query: 239 LSTKFVRKDISMSNNMFYLNAMLLVCTLLFTLTHINADSDEGSISKIGTSVGHT-MNIYY 415
           L T +V   ++    +F++  +  V  +L  +T  + DS    +S    S G + + +YY
Sbjct: 183 LGTPYVLGTVTQWKYIFFIETIPCVLHILVNITTFH-DSPTYLLSIGKISEGESAIKVYY 241

Query: 416 CYSCGYKKVFED 451
             +C  KK+ ED
Sbjct: 242 GETCHIKKIMED 253


>Z66524-5|CAC70104.1|  566|Caenorhabditis elegans Hypothetical
           protein T13H5.8 protein.
          Length = 566

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
 Frame = +1

Query: 535 SRIIGFGKMLVIMCILSGVNIFAWLNKPQPAWWSWCLE---NKLYACMMMFFL 684
           S+ + +  +L++  ++ G  I++ L  P  +W SW LE   N +YA   +F L
Sbjct: 399 SQAMKYLSILLVPLVIGGA-IYSLLYVPHKSWRSWILETSANGVYAFGFLFML 450


>Z81570-1|CAB04606.1|  749|Caenorhabditis elegans Hypothetical
           protein K12G11.1 protein.
          Length = 749

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
 Frame = +2

Query: 47  KCHLKNKIKEALKQWFLKFLKPISIDLYFVLFLF--ITKLKTFGRLK 181
           K HL+N++K+  K++  +F +P +      LF+F  I  LK F   K
Sbjct: 59  KPHLENELKKQAKKFVRRFYEPFTSFFALKLFIFDLIPILKWFPEYK 105


>Z68342-9|CAD91630.2|  626|Caenorhabditis elegans Hypothetical
           protein F38E11.12 protein.
          Length = 626

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 20/76 (26%), Positives = 35/76 (46%)
 Frame = -1

Query: 405 FIVCPTLVPILLMLPSSLSALI*VSVNNKVQTSNIAFR*NILFDILISFLTNLVDKWVKI 226
           F+VC  L  I+++   +   +    +  K+   NIAF    LFDI++  + +  +  V I
Sbjct: 68  FVVCGCLYNIIVLSVLAFENIRYAYIE-KILPINIAFDTVFLFDIILRSMLSFYEDGVLI 126

Query: 225 VAFAMVIPLYYGIFIF 178
            +F+     Y   F F
Sbjct: 127 TSFSETWRHYVHSFYF 142


>AY887910-1|AAX34422.1|  749|Caenorhabditis elegans anion
           transporter SULP-4 protein.
          Length = 749

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
 Frame = +2

Query: 47  KCHLKNKIKEALKQWFLKFLKPISIDLYFVLFLF--ITKLKTFGRLK 181
           K HL+N++K+  K++  +F +P +      LF+F  I  LK F   K
Sbjct: 59  KPHLENELKKQAKKFVRRFYEPFTSFFALKLFIFDLIPILKWFPEYK 105


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,365,283
Number of Sequences: 27780
Number of extensions: 361539
Number of successful extensions: 960
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 929
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 960
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)