Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0116
         (690 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    24   1.6  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          23   2.1  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      23   2.1  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    22   4.8  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     22   4.8  
AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.              22   4.8  

>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +1

Query: 565 VIMCILSGVNIFAWLNKPQPAWWSW 639
           VI  +L  + IF  +   +PAWW W
Sbjct: 10  VIAAVLLTILIF--VTSHRPAWWFW 32


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 14/51 (27%), Positives = 21/51 (41%)
 Frame = +3

Query: 447 KTMQELYNKNTQRFLSLELTIPTWF*HVSITNYWFWQNVGHHVYTQRCEYF 599
           + MQ+ YN        ++ T      ++   NY  W    H+V  QR  YF
Sbjct: 172 EVMQKAYNIAMGDTADMKKTYNNIDYYLLAANYTGWYLTKHNVPEQRLNYF 222


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 14/51 (27%), Positives = 21/51 (41%)
 Frame = +3

Query: 447 KTMQELYNKNTQRFLSLELTIPTWF*HVSITNYWFWQNVGHHVYTQRCEYF 599
           + MQ+ YN        ++ T      ++   NY  W    H+V  QR  YF
Sbjct: 172 EVMQKAYNIAMGDTADMKKTYNNIDYYLLAANYTGWYLTKHNVPEQRLNYF 222


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 11/70 (15%)
 Frame = +2

Query: 17  LLITFSLIIKKCHLKNKIKEALK-----------QWFLKFLKPISIDLYFVLFLFITKLK 163
           + +TF+ +  +C  K  I+EALK             F    +P SIDL  V   F   L+
Sbjct: 136 MTVTFANLGIQCVKKKDIEEALKIREEIRVDPFRTGFEHKRQPTSIDLNAVRLCFQVFLE 195

Query: 164 TFGRLKINIP 193
              + K N+P
Sbjct: 196 GSQKRKFNVP 205



 Score = 21.4 bits (43), Expect = 8.4
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = +2

Query: 161 KTFGRLKINIP**RGITIAKATIFTHLSTKFVRKDISMSNN 283
           K F R K +      I   + T+F++++ KF R     +NN
Sbjct: 337 KAFARKKTDYSSFGKILATEPTLFSNVTPKFPRNIDEYNNN 377


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 11/70 (15%)
 Frame = +2

Query: 17  LLITFSLIIKKCHLKNKIKEALK-----------QWFLKFLKPISIDLYFVLFLFITKLK 163
           + +TF+ +  +C  K  I+EALK             F    +P SIDL  V   F   L+
Sbjct: 136 MTVTFANLGIQCVKKKDIEEALKIREEIRVDPFRTGFEHKRQPTSIDLNAVRLCFQVFLE 195

Query: 164 TFGRLKINIP 193
              + K N+P
Sbjct: 196 GSQKRKFNVP 205


>AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.
          Length = 133

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +1

Query: 154 KIENIRPPKNKYSV 195
           KI+ I PP+ KYSV
Sbjct: 101 KIKIIAPPEKKYSV 114


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,416
Number of Sequences: 438
Number of extensions: 4722
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21073995
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)