Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0115
         (771 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    22   4.7  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    22   6.2  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   6.2  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   8.2  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   8.2  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     21   8.2  

>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = -2

Query: 224 HHVPHISHRSRSFEAS 177
           HH PH++H    + A+
Sbjct: 40  HHSPHLNHAMHPYHAN 55


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -1

Query: 735 FVHRHSFVQYTLDFTMF 685
           F+H  + VQ TLD T++
Sbjct: 60  FIHIKAVVQITLDATLY 76


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -1

Query: 735 FVHRHSFVQYTLDFTMF 685
           F+H  + VQ TLD T++
Sbjct: 60  FIHIKAVVQITLDATLY 76


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 10/35 (28%), Positives = 20/35 (57%)
 Frame = +3

Query: 528 DEKEHGIFKRSGNDLILRMNIELVEALCGFQKVIR 632
           D+KE  +FK +   L+L  +I +  +  G+ + +R
Sbjct: 123 DQKERNLFKNAYFQLVL--SISVYSSSVGYTQYVR 155


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 11/58 (18%), Positives = 25/58 (43%)
 Frame = -1

Query: 492 FLITFSTKHNLLPINHTFIHMNFKNFTITYYFTSLTDFATVFRIYNLFLSTAFAAYCL 319
           F++ F     ++P+ H     N +   + +       F  V+ +YN+F +     +C+
Sbjct: 35  FVVIFGQFFGIMPL-HGVSRKNVQEIRLEW-----KSFRFVYAVYNIFGAFVMGLFCI 86


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -2

Query: 227 YHHVPHISH 201
           Y+H PH+SH
Sbjct: 105 YNHSPHLSH 113


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,489
Number of Sequences: 336
Number of extensions: 4246
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20753800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)