Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0113
         (735 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    27   0.79 
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    27   0.79 
AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    27   0.79 
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    27   0.79 
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    25   1.8  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    24   5.6  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    24   5.6  
AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeot...    23   7.4  

>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 26.6 bits (56), Expect = 0.79
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = +3

Query: 363 VMYLMKLASAWLKCQRTPNCTQSCWSHLLC 452
           V Y   L +A   C  TPN T + WSH  C
Sbjct: 170 VEYYTVLGAACQVC--TPNATNTVWSHCQC 197


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 26.6 bits (56), Expect = 0.79
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = +3

Query: 363 VMYLMKLASAWLKCQRTPNCTQSCWSHLLC 452
           V Y   L +A   C  TPN T + WSH  C
Sbjct: 170 VEYYTVLGAACQVC--TPNATNTVWSHCQC 197


>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 26.6 bits (56), Expect = 0.79
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -3

Query: 703 LGDQLQARLQSVADLDTSPGCNQLDYHH 620
           +G  +  RL +V + + S GC+  D HH
Sbjct: 402 IGGSVFTRLTTVEEQNVSSGCSHKDLHH 429


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 26.6 bits (56), Expect = 0.79
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -3

Query: 703 LGDQLQARLQSVADLDTSPGCNQLDYHH 620
           +G  +  RL +V + + S GC+  D HH
Sbjct: 402 IGGSVFTRLTTVEEQNVSSGCSHKDLHH 429


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -2

Query: 290 SEVQPASPSFHSFHNLETLLLDKTALFDVE 201
           S+   A+ S HS   L +LLL+ T + D+E
Sbjct: 144 SKPHVATLSLHSLFELRSLLLNGTVMLDME 173


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 13/41 (31%), Positives = 18/41 (43%)
 Frame = -2

Query: 377 HQVHYVRDLHALSVPSDELGSACSKIGSSSEVQPASPSFHS 255
           +Q+H+    H +  PS E G+A        EV      FHS
Sbjct: 505 YQLHHQMSYHNMFTPSREPGTAWRCRSCGKEVTNRWHHFHS 545


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 13/41 (31%), Positives = 18/41 (43%)
 Frame = -2

Query: 377 HQVHYVRDLHALSVPSDELGSACSKIGSSSEVQPASPSFHS 255
           +Q+H+    H +  PS E G+A        EV      FHS
Sbjct: 481 YQLHHQMSYHNMFTPSREPGTAWRCRSCGKEVTNRWHHFHS 521


>AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeotic
           protein protein.
          Length = 308

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -2

Query: 329 DELGSACSKIGSS 291
           D LGSACS++ SS
Sbjct: 72  DSLGSACSQLSSS 84


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 683,065
Number of Sequences: 2352
Number of extensions: 12959
Number of successful extensions: 23
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75260343
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)