Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0112
         (664 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7RDT9 Cluster: Putative uncharacterized protein PY0533...    34   3.5  
UniRef50_Q2UEJ9 Cluster: Predicted protein; n=1; Aspergillus ory...    33   6.1  
UniRef50_UPI0000E460B8 Cluster: PREDICTED: similar to Lipoma HMG...    33   8.1  

>UniRef50_Q7RDT9 Cluster: Putative uncharacterized protein PY05331;
           n=1; Plasmodium yoelii yoelii|Rep: Putative
           uncharacterized protein PY05331 - Plasmodium yoelii
           yoelii
          Length = 145

 Score = 33.9 bits (74), Expect = 3.5
 Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
 Frame = -1

Query: 586 NIKGYIST*SNSAGLFKMGGYKTFRNRVTYILAEKKNEVFS--FVTESTREGTLMKFECT 413
           NIK Y  T SN   +FK      F  +V YI  + KNE  S  +  +   E  L+ +  +
Sbjct: 65  NIKNYEQTYSNFLRIFKGENNTNFIKKVIYIDGKNKNEKESEIYKQDKNNENNLLIYNIS 124

Query: 412 QCNSTNDNLFNV 377
              ++  NL N+
Sbjct: 125 DNKTSYKNLLNL 136


>UniRef50_Q2UEJ9 Cluster: Predicted protein; n=1; Aspergillus
           oryzae|Rep: Predicted protein - Aspergillus oryzae
          Length = 373

 Score = 33.1 bits (72), Expect = 6.1
 Identities = 21/70 (30%), Positives = 32/70 (45%)
 Frame = -1

Query: 577 GYIST*SNSAGLFKMGGYKTFRNRVTYILAEKKNEVFSFVTESTREGTLMKFECTQCNST 398
           G+ S   +   L    GYKT+ N+ T++L EK  E    V E       +    +QCN+ 
Sbjct: 92  GFWSKVGSKCYLLNGNGYKTYHNKGTFLLFEKTTEDPGSVDECKDR---VDSATSQCNAE 148

Query: 397 NDNLFNVGSK 368
            D +   GS+
Sbjct: 149 KDKIKQQGSQ 158


>UniRef50_UPI0000E460B8 Cluster: PREDICTED: similar to Lipoma HMGIC
           fusion partner-like 3 protein; n=1; Strongylocentrotus
           purpuratus|Rep: PREDICTED: similar to Lipoma HMGIC
           fusion partner-like 3 protein - Strongylocentrotus
           purpuratus
          Length = 341

 Score = 32.7 bits (71), Expect = 8.1
 Identities = 16/34 (47%), Positives = 20/34 (58%)
 Frame = -3

Query: 377 WIQSTTYNIALIVDLITFSQTKKCLLNWKGFLAI 276
           W Q + Y  AL  D I+++ TK C L W  FLAI
Sbjct: 163 WSQHSAYK-ALCQDTISYTDTKGCELRWVFFLAI 195


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 592,160,784
Number of Sequences: 1657284
Number of extensions: 10935116
Number of successful extensions: 21443
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21439
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50413227838
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)