Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0112
         (664 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.)              34   0.090
SB_15833| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.63 
SB_26353| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=1.9e-18)        30   1.5  
SB_36687| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.5  
SB_8952| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   5.9  

>SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2672

 Score = 34.3 bits (75), Expect = 0.090
 Identities = 14/33 (42%), Positives = 23/33 (69%)
 Frame = -3

Query: 161  HTRVLSLETGGDVQISFNNFKNFLCQTVNILKQ 63
            HTRV+S+E GGD++  F  F N L +  +++K+
Sbjct: 2526 HTRVISMEKGGDMRAVFTRFCNGLNKVESLIKE 2558


>SB_15833| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 775

 Score = 31.5 bits (68), Expect = 0.63
 Identities = 13/33 (39%), Positives = 22/33 (66%)
 Frame = -3

Query: 161 HTRVLSLETGGDVQISFNNFKNFLCQTVNILKQ 63
           HTRV+S++ GGD++  F+ F   L Q   ++K+
Sbjct: 266 HTRVISMQQGGDMRSVFDRFCRGLNQVEGLIKK 298


>SB_26353| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=1.9e-18)
          Length = 138

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 12/34 (35%), Positives = 23/34 (67%)
 Frame = -3

Query: 161 HTRVLSLETGGDVQISFNNFKNFLCQTVNILKQF 60
           H RV+S+ETGGD++ ++  F   L +  + +++F
Sbjct: 68  HLRVISMETGGDLERTYERFYRGLKELESRIQKF 101


>SB_36687| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1115

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 12/32 (37%), Positives = 22/32 (68%)
 Frame = -3

Query: 161 HTRVLSLETGGDVQISFNNFKNFLCQTVNILK 66
           HTRV+S++ GG+++  F  F N L +  +++K
Sbjct: 574 HTRVISMQKGGNMKEVFARFCNGLNKVESLIK 605



 Score = 28.3 bits (60), Expect = 5.9
 Identities = 12/32 (37%), Positives = 22/32 (68%)
 Frame = -3

Query: 161  HTRVLSLETGGDVQISFNNFKNFLCQTVNILK 66
            HTRV+S++ GG+++  F+ F N L +  + +K
Sbjct: 971  HTRVISMQQGGNMREVFHRFCNGLKKIEDAMK 1002



 Score = 27.9 bits (59), Expect = 7.8
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = -3

Query: 161 HTRVLSLETGGDVQISFNNFKNFLCQTVNILK 66
           HTRV+S++ GG+++  F  F N L +    +K
Sbjct: 205 HTRVISMQKGGNMKEVFTRFCNGLNKVEKAIK 236


>SB_8952| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 189

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +2

Query: 116 KSGHRLPFRVKEHVYDCSIRGQLRMGLFKSHDT 214
           +SG +       H  DC +R QLR GLF  HD+
Sbjct: 71  RSGEQAVNHFPGHYDDCHVRHQLRAGLF-GHDS 102


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,444,675
Number of Sequences: 59808
Number of extensions: 346737
Number of successful extensions: 620
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 537
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 620
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1705624125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)