Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0111
(664 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z54216-9|CAN86906.1| 155|Caenorhabditis elegans Hypothetical pr... 42 4e-04
Z54216-8|CAA90948.1| 101|Caenorhabditis elegans Hypothetical pr... 42 4e-04
Z54216-7|CAI46586.1| 299|Caenorhabditis elegans Hypothetical pr... 42 4e-04
Z54216-6|CAB76416.2| 319|Caenorhabditis elegans Hypothetical pr... 42 4e-04
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 31 0.96
AY835433-1|AAX37360.1| 331|Caenorhabditis elegans bZIP transcri... 31 0.96
AY835432-1|AAX37359.1| 467|Caenorhabditis elegans bZIP transcri... 31 0.96
AF016440-2|AAB65905.2| 331|Caenorhabditis elegans Abnormal ever... 31 0.96
AF016440-1|ABA54419.1| 467|Caenorhabditis elegans Abnormal ever... 31 0.96
Z82268-9|CAD89738.1| 509|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical pr... 30 1.3
AL023835-17|CAD89760.1| 509|Caenorhabditis elegans Hypothetical... 30 1.3
AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical... 30 1.3
AL132862-27|CAB60564.1| 682|Caenorhabditis elegans Hypothetical... 30 1.7
Z73969-19|CAJ43440.1| 548|Caenorhabditis elegans Hypothetical p... 29 2.2
Z73969-2|CAA98233.1| 611|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z73969-1|CAA98232.1| 589|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z36238-10|CAL63999.1| 287|Caenorhabditis elegans Hypothetical p... 29 2.2
Z36238-9|CAL63998.1| 335|Caenorhabditis elegans Hypothetical pr... 29 2.2
AF443191-1|AAL60201.1| 285|Caenorhabditis elegans X-box binding... 29 2.2
AF443190-1|AAL60200.1| 287|Caenorhabditis elegans X-box binding... 29 2.2
AF039716-7|AAB96735.3| 617|Caenorhabditis elegans Sodium:neurot... 29 2.2
U97405-1|AAB53007.1| 327|Caenorhabditis elegans Hypothetical pr... 29 2.9
U42843-3|AAM75365.1| 310|Caenorhabditis elegans Skinhead protei... 29 2.9
U42843-2|AAM75366.1| 533|Caenorhabditis elegans Skinhead protei... 29 2.9
U42843-1|AAA83594.2| 623|Caenorhabditis elegans Skinhead protei... 29 2.9
Z34799-2|CAA84318.1| 692|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z82083-9|CAB04975.1| 635|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z81503-6|CAB04115.1| 635|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z50006-7|CAA90302.2| 1461|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z50004-4|CAA90293.2| 1461|Caenorhabditis elegans Hypothetical pr... 28 5.1
U29612-3|AAA68802.2| 289|Caenorhabditis elegans Hypothetical pr... 28 5.1
AL132943-3|CAB81974.1| 345|Caenorhabditis elegans Hypothetical ... 28 5.1
AB066246-1|BAC05514.1| 1461|Caenorhabditis elegans ADT-1 protein. 28 5.1
Z73898-9|CAA98066.2| 913|Caenorhabditis elegans Hypothetical pr... 28 6.8
U41508-2|AAN39665.2| 552|Caenorhabditis elegans Set (trithorax/... 27 9.0
AL032627-7|CAD56256.1| 306|Caenorhabditis elegans Hypothetical ... 27 9.0
AL032627-6|CAD56255.1| 331|Caenorhabditis elegans Hypothetical ... 27 9.0
AL032627-5|CAD45607.2| 314|Caenorhabditis elegans Hypothetical ... 27 9.0
AL032627-4|CAB54382.2| 327|Caenorhabditis elegans Hypothetical ... 27 9.0
AL032627-3|CAB54381.2| 325|Caenorhabditis elegans Hypothetical ... 27 9.0
AB081596-1|BAC19843.1| 325|Caenorhabditis elegans cyclic AMP-re... 27 9.0
AB081595-1|BAC19842.1| 306|Caenorhabditis elegans cyclic AMP-re... 27 9.0
>Z54216-9|CAN86906.1| 155|Caenorhabditis elegans Hypothetical
protein T24H10.7d protein.
Length = 155
Score = 41.9 bits (94), Expect = 4e-04
Identities = 18/29 (62%), Positives = 25/29 (86%)
Frame = +1
Query: 577 KIQLERKRQRNRVAASKCRRRKLERISKL 663
K +LERKR RNR AA+KCR++K++RI +L
Sbjct: 80 KKKLERKRARNRQAATKCRQKKMDRIKEL 108
>Z54216-8|CAA90948.1| 101|Caenorhabditis elegans Hypothetical
protein T24H10.7c protein.
Length = 101
Score = 41.9 bits (94), Expect = 4e-04
Identities = 18/29 (62%), Positives = 25/29 (86%)
Frame = +1
Query: 577 KIQLERKRQRNRVAASKCRRRKLERISKL 663
K +LERKR RNR AA+KCR++K++RI +L
Sbjct: 26 KKKLERKRARNRQAATKCRQKKMDRIKEL 54
>Z54216-7|CAI46586.1| 299|Caenorhabditis elegans Hypothetical
protein T24H10.7b protein.
Length = 299
Score = 41.9 bits (94), Expect = 4e-04
Identities = 18/29 (62%), Positives = 25/29 (86%)
Frame = +1
Query: 577 KIQLERKRQRNRVAASKCRRRKLERISKL 663
K +LERKR RNR AA+KCR++K++RI +L
Sbjct: 224 KKKLERKRARNRQAATKCRQKKMDRIKEL 252
>Z54216-6|CAB76416.2| 319|Caenorhabditis elegans Hypothetical
protein T24H10.7a protein.
Length = 319
Score = 41.9 bits (94), Expect = 4e-04
Identities = 18/29 (62%), Positives = 25/29 (86%)
Frame = +1
Query: 577 KIQLERKRQRNRVAASKCRRRKLERISKL 663
K +LERKR RNR AA+KCR++K++RI +L
Sbjct: 244 KKKLERKRARNRQAATKCRQKKMDRIKEL 272
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 30.7 bits (66), Expect = 0.96
Identities = 32/116 (27%), Positives = 47/116 (40%), Gaps = 6/116 (5%)
Frame = +2
Query: 275 VGKIDHSKRYGDNRYPYSGSACLISRSSTYGGTRNVRATFRRSARQAAPRR-----GSDA 439
V K + KR + S S+ S S+ G+R+ ++ +R +PRR +
Sbjct: 2 VEKEETKKRARSSSSSSSSSSGSSSSGSSSSGSRSSSSSSSGRSRSRSPRRRDTRPPARG 61
Query: 440 ARTSSICRFGQAAR-AIPHSHREGEPQTVPSAASTPPLSPIDMDTQERSNWRERDR 604
R+ S R G R A R P P P SP D ++RS R+R R
Sbjct: 62 GRSRSPIRRGSPPRGARADRDRPMRPSPSPPRRRRPSPSPPRRDRRDRSGSRQRRR 117
>AY835433-1|AAX37360.1| 331|Caenorhabditis elegans bZIP
transcription factor FOS-1b protein.
Length = 331
Score = 30.7 bits (66), Expect = 0.96
Identities = 10/24 (41%), Positives = 21/24 (87%)
Frame = +1
Query: 592 RKRQRNRVAASKCRRRKLERISKL 663
++RQRN+ AA++CR+R+++ + +L
Sbjct: 32 KRRQRNKEAAARCRQRRIDLMKEL 55
>AY835432-1|AAX37359.1| 467|Caenorhabditis elegans bZIP
transcription factor FOS-1a protein.
Length = 467
Score = 30.7 bits (66), Expect = 0.96
Identities = 10/24 (41%), Positives = 21/24 (87%)
Frame = +1
Query: 592 RKRQRNRVAASKCRRRKLERISKL 663
++RQRN+ AA++CR+R+++ + +L
Sbjct: 168 KRRQRNKEAAARCRQRRIDLMKEL 191
>AF016440-2|AAB65905.2| 331|Caenorhabditis elegans Abnormal
eversion of vulva protein5, isoform a protein.
Length = 331
Score = 30.7 bits (66), Expect = 0.96
Identities = 10/24 (41%), Positives = 21/24 (87%)
Frame = +1
Query: 592 RKRQRNRVAASKCRRRKLERISKL 663
++RQRN+ AA++CR+R+++ + +L
Sbjct: 32 KRRQRNKEAAARCRQRRIDLMKEL 55
>AF016440-1|ABA54419.1| 467|Caenorhabditis elegans Abnormal
eversion of vulva protein5, isoform b protein.
Length = 467
Score = 30.7 bits (66), Expect = 0.96
Identities = 10/24 (41%), Positives = 21/24 (87%)
Frame = +1
Query: 592 RKRQRNRVAASKCRRRKLERISKL 663
++RQRN+ AA++CR+R+++ + +L
Sbjct: 168 KRRQRNKEAAARCRQRRIDLMKEL 191
>Z82268-9|CAD89738.1| 509|Caenorhabditis elegans Hypothetical
protein Y37A1B.1b protein.
Length = 509
Score = 30.3 bits (65), Expect = 1.3
Identities = 33/108 (30%), Positives = 46/108 (42%), Gaps = 4/108 (3%)
Frame = +2
Query: 293 SKRYGDNRYPYSGSACLISRSSTYGGTRNVRATFRRS--ARQAAP--RRGSDAARTSSIC 460
S+R+G P SG++ R+ GG R + RS AR+ +P RR S RTSS
Sbjct: 190 SQRWG--AAPASGTS---DRADRNGGARGNDSPLHRSSAARRHSPPPRRASPPRRTSSPK 244
Query: 461 RFGQAARAIPHSHREGEPQTVPSAASTPPLSPIDMDTQERSNWRERDR 604
R + AR I S E + P + N R+R+R
Sbjct: 245 RDARPAREIRDSREPREVRRSPPPRRAASPRKASSPSAPAKNDRKRER 292
>Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical
protein Y37A1B.1a protein.
Length = 1222
Score = 30.3 bits (65), Expect = 1.3
Identities = 33/108 (30%), Positives = 46/108 (42%), Gaps = 4/108 (3%)
Frame = +2
Query: 293 SKRYGDNRYPYSGSACLISRSSTYGGTRNVRATFRRS--ARQAAP--RRGSDAARTSSIC 460
S+R+G P SG++ R+ GG R + RS AR+ +P RR S RTSS
Sbjct: 190 SQRWG--AAPASGTS---DRADRNGGARGNDSPLHRSSAARRHSPPPRRASPPRRTSSPK 244
Query: 461 RFGQAARAIPHSHREGEPQTVPSAASTPPLSPIDMDTQERSNWRERDR 604
R + AR I S E + P + N R+R+R
Sbjct: 245 RDARPAREIRDSREPREVRRSPPPRRAASPRKASSPSAPAKNDRKRER 292
>AL023835-17|CAD89760.1| 509|Caenorhabditis elegans Hypothetical
protein Y37A1B.1b protein.
Length = 509
Score = 30.3 bits (65), Expect = 1.3
Identities = 33/108 (30%), Positives = 46/108 (42%), Gaps = 4/108 (3%)
Frame = +2
Query: 293 SKRYGDNRYPYSGSACLISRSSTYGGTRNVRATFRRS--ARQAAP--RRGSDAARTSSIC 460
S+R+G P SG++ R+ GG R + RS AR+ +P RR S RTSS
Sbjct: 190 SQRWG--AAPASGTS---DRADRNGGARGNDSPLHRSSAARRHSPPPRRASPPRRTSSPK 244
Query: 461 RFGQAARAIPHSHREGEPQTVPSAASTPPLSPIDMDTQERSNWRERDR 604
R + AR I S E + P + N R+R+R
Sbjct: 245 RDARPAREIRDSREPREVRRSPPPRRAASPRKASSPSAPAKNDRKRER 292
>AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical
protein Y37A1B.1a protein.
Length = 1222
Score = 30.3 bits (65), Expect = 1.3
Identities = 33/108 (30%), Positives = 46/108 (42%), Gaps = 4/108 (3%)
Frame = +2
Query: 293 SKRYGDNRYPYSGSACLISRSSTYGGTRNVRATFRRS--ARQAAP--RRGSDAARTSSIC 460
S+R+G P SG++ R+ GG R + RS AR+ +P RR S RTSS
Sbjct: 190 SQRWG--AAPASGTS---DRADRNGGARGNDSPLHRSSAARRHSPPPRRASPPRRTSSPK 244
Query: 461 RFGQAARAIPHSHREGEPQTVPSAASTPPLSPIDMDTQERSNWRERDR 604
R + AR I S E + P + N R+R+R
Sbjct: 245 RDARPAREIRDSREPREVRRSPPPRRAASPRKASSPSAPAKNDRKRER 292
>AL132862-27|CAB60564.1| 682|Caenorhabditis elegans Hypothetical
protein Y73F8A.35 protein.
Length = 682
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 381 YARPFVEALDKLHHGEAVT 437
Y RPF AL++ HHGE +T
Sbjct: 314 YMRPFQNALERPHHGEFIT 332
>Z73969-19|CAJ43440.1| 548|Caenorhabditis elegans Hypothetical
protein C12D8.1c protein.
Length = 548
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/70 (24%), Positives = 30/70 (42%)
Frame = +2
Query: 404 ARQAAPRRGSDAARTSSICRFGQAARAIPHSHREGEPQTVPSAASTPPLSPIDMDTQERS 583
A+Q A + A + Q A P ++ +P T +A +TP + P+ + +
Sbjct: 406 AQQTAAPAAAPYAAAGIVQPQQQVAYQQPQVVQQVQPATTVAATTTPTVDPVTGEQDYSA 465
Query: 584 NWRERDRGIG 613
W E + IG
Sbjct: 466 QWMEYYKSIG 475
>Z73969-2|CAA98233.1| 611|Caenorhabditis elegans Hypothetical
protein C12D8.1b protein.
Length = 611
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/70 (24%), Positives = 30/70 (42%)
Frame = +2
Query: 404 ARQAAPRRGSDAARTSSICRFGQAARAIPHSHREGEPQTVPSAASTPPLSPIDMDTQERS 583
A+Q A + A + Q A P ++ +P T +A +TP + P+ + +
Sbjct: 469 AQQTAAPAAAPYAAAGIVQPQQQVAYQQPQVVQQVQPATTVAATTTPTVDPVTGEQDYSA 528
Query: 584 NWRERDRGIG 613
W E + IG
Sbjct: 529 QWMEYYKSIG 538
>Z73969-1|CAA98232.1| 589|Caenorhabditis elegans Hypothetical
protein C12D8.1a protein.
Length = 589
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/70 (24%), Positives = 30/70 (42%)
Frame = +2
Query: 404 ARQAAPRRGSDAARTSSICRFGQAARAIPHSHREGEPQTVPSAASTPPLSPIDMDTQERS 583
A+Q A + A + Q A P ++ +P T +A +TP + P+ + +
Sbjct: 447 AQQTAAPAAAPYAAAGIVQPQQQVAYQQPQVVQQVQPATTVAATTTPTVDPVTGEQDYSA 506
Query: 584 NWRERDRGIG 613
W E + IG
Sbjct: 507 QWMEYYKSIG 516
>Z36238-10|CAL63999.1| 287|Caenorhabditis elegans Hypothetical
protein R74.3b protein.
Length = 287
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 520 GAERGQHAAAITHRHGH-SGKIQLERKRQRNRVAASKCRRRKLERISKL 663
G + G R H S + +++R++ +NRVAA R +K ER +K+
Sbjct: 41 GDDMGPSGPRKRERLNHLSQEEKMDRRKLKNRVAAQNARDKKKERSAKI 89
>Z36238-9|CAL63998.1| 335|Caenorhabditis elegans Hypothetical
protein R74.3a protein.
Length = 335
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 520 GAERGQHAAAITHRHGH-SGKIQLERKRQRNRVAASKCRRRKLERISKL 663
G + G R H S + +++R++ +NRVAA R +K ER +K+
Sbjct: 41 GDDMGPSGPRKRERLNHLSQEEKMDRRKLKNRVAAQNARDKKKERSAKI 89
>AF443191-1|AAL60201.1| 285|Caenorhabditis elegans X-box binding
protein processedisoform protein.
Length = 285
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 520 GAERGQHAAAITHRHGH-SGKIQLERKRQRNRVAASKCRRRKLERISKL 663
G + G R H S + +++R++ +NRVAA R +K ER +K+
Sbjct: 41 GDDMGPSGPRKRERLNHLSQEEKMDRRKLKNRVAAQNARDKKKERSAKI 89
>AF443190-1|AAL60200.1| 287|Caenorhabditis elegans X-box binding
protein unprocessedisoform protein.
Length = 287
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 520 GAERGQHAAAITHRHGH-SGKIQLERKRQRNRVAASKCRRRKLERISKL 663
G + G R H S + +++R++ +NRVAA R +K ER +K+
Sbjct: 41 GDDMGPSGPRKRERLNHLSQEEKMDRRKLKNRVAAQNARDKKKERSAKI 89
>AF039716-7|AAB96735.3| 617|Caenorhabditis elegans
Sodium:neurotransmitter symporterfamily protein 1
protein.
Length = 617
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +2
Query: 425 RGSDAARTSSICRFGQAARAIPHSHREGEPQTVPSAASTPP 547
+G D A+T R AAR H HR+ + Q +P S P
Sbjct: 560 KGKDHAKTCKRIRTVFAARLQNHHHRDEKAQPIPRYTSNAP 600
>U97405-1|AAB53007.1| 327|Caenorhabditis elegans Hypothetical
protein T09B4.5a protein.
Length = 327
Score = 29.1 bits (62), Expect = 2.9
Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = +2
Query: 332 SACLISRSSTYGGTRNVRATFRRSARQAAPRRGSDAART-SSICRFGQAARAIPHSHREG 508
SA S+S T NV+ T RSA ++A RG A++T + + +A A S G
Sbjct: 37 SARKASKSPARARTSNVKKTPSRSASKSA-TRGRTASKTPKTPSKTPSSASARSRSRSRG 95
Query: 509 EPQTVPS-AASTPPLS 553
P +ASTP S
Sbjct: 96 RPTNASRLSASTPSAS 111
>U42843-3|AAM75365.1| 310|Caenorhabditis elegans Skinhead protein
1, isoform b protein.
Length = 310
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +1
Query: 592 RKRQRNRVAASKCRRRKLERISKL 663
R+R +N+VAA CR+R+ +R K+
Sbjct: 283 RRRGKNKVAARTCRQRRTDRHDKM 306
>U42843-2|AAM75366.1| 533|Caenorhabditis elegans Skinhead protein
1, isoform c protein.
Length = 533
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +1
Query: 592 RKRQRNRVAASKCRRRKLERISKL 663
R+R +N+VAA CR+R+ +R K+
Sbjct: 506 RRRGKNKVAARTCRQRRTDRHDKM 529
>U42843-1|AAA83594.2| 623|Caenorhabditis elegans Skinhead protein
1, isoform a protein.
Length = 623
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +1
Query: 592 RKRQRNRVAASKCRRRKLERISKL 663
R+R +N+VAA CR+R+ +R K+
Sbjct: 596 RRRGKNKVAARTCRQRRTDRHDKM 619
>Z34799-2|CAA84318.1| 692|Caenorhabditis elegans Hypothetical
protein F34D10.4 protein.
Length = 692
Score = 28.7 bits (61), Expect = 3.9
Identities = 16/60 (26%), Positives = 25/60 (41%)
Frame = +2
Query: 398 RSARQAAPRRGSDAARTSSICRFGQAARAIPHSHREGEPQTVPSAASTPPLSPIDMDTQE 577
R+ R S A SS R ++ R P T+P STP P+D++ ++
Sbjct: 377 RATASVGARAPSRAPAPSSTSRETRSTRRSPSKGPSAPAYTLPFGGSTPNHEPMDLELED 436
>Z82083-9|CAB04975.1| 635|Caenorhabditis elegans Hypothetical
protein ZK1010.9 protein.
Length = 635
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 142 PLSGPVENLKRPLTLDVGRGGKRSRI 219
P GPV+ K+P T+D GR R+++
Sbjct: 34 PTKGPVQPQKKPTTVDNGRRAYRNQV 59
>Z81503-6|CAB04115.1| 635|Caenorhabditis elegans Hypothetical
protein ZK1010.9 protein.
Length = 635
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 142 PLSGPVENLKRPLTLDVGRGGKRSRI 219
P GPV+ K+P T+D GR R+++
Sbjct: 34 PTKGPVQPQKKPTTVDNGRRAYRNQV 59
>Z50006-7|CAA90302.2| 1461|Caenorhabditis elegans Hypothetical
protein C02B4.1 protein.
Length = 1461
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +3
Query: 99 FRPQHGDHLL*RAISSQRPCGKP*KAPNLGCWAGWETFTNRCTRS 233
FRP D + + +RPC N GCW W+ +++ C++S
Sbjct: 782 FRPCLTDQCSSKHLQEERPCD------NEGCWTNWDEWSS-CSQS 819
>Z50004-4|CAA90293.2| 1461|Caenorhabditis elegans Hypothetical
protein C02B4.1 protein.
Length = 1461
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +3
Query: 99 FRPQHGDHLL*RAISSQRPCGKP*KAPNLGCWAGWETFTNRCTRS 233
FRP D + + +RPC N GCW W+ +++ C++S
Sbjct: 782 FRPCLTDQCSSKHLQEERPCD------NEGCWTNWDEWSS-CSQS 819
>U29612-3|AAA68802.2| 289|Caenorhabditis elegans Hypothetical
protein C09B8.4 protein.
Length = 289
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +2
Query: 332 SACLISRSSTYGGTRNV 382
S CL S SSTYGG RN+
Sbjct: 7 SHCLKSSSSTYGGIRNI 23
>AL132943-3|CAB81974.1| 345|Caenorhabditis elegans Hypothetical
protein Y116F11B.6 protein.
Length = 345
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +1
Query: 571 SGKIQLERKRQRNRVAASKCRRRKLERISK 660
SGK + KR+RNR+AA+K RR + E + K
Sbjct: 131 SGKAKT--KRERNRIAAAKSRRLEKELMRK 158
>AB066246-1|BAC05514.1| 1461|Caenorhabditis elegans ADT-1 protein.
Length = 1461
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +3
Query: 99 FRPQHGDHLL*RAISSQRPCGKP*KAPNLGCWAGWETFTNRCTRS 233
FRP D + + +RPC N GCW W+ +++ C++S
Sbjct: 782 FRPCLTDQCSSKHLQEERPCD------NEGCWTNWDEWSS-CSQS 819
>Z73898-9|CAA98066.2| 913|Caenorhabditis elegans Hypothetical
protein ZK822.1 protein.
Length = 913
Score = 27.9 bits (59), Expect = 6.8
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 5/40 (12%)
Frame = +2
Query: 509 EPQT-VPSAASTPPLS----PIDMDTQERSNWRERDRGIG 613
EPQT +P ++PP S P E+ W ER +GIG
Sbjct: 872 EPQTSIPRITTSPPESRIPTPSSRHGNEKRGWLERLKGIG 911
>U41508-2|AAN39665.2| 552|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 20,
isoform b protein.
Length = 552
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = +1
Query: 532 GQHAAAITHRHGHSGKIQLERKRQRNRVAASKCRRRKLERI 654
G+ +A+ R +SG+ LE KR+R+ + + R+K+E+I
Sbjct: 153 GELQSALIGR-ANSGRCYLEEKRKRSTLQRRREARKKIEKI 192
>AL032627-7|CAD56256.1| 306|Caenorhabditis elegans Hypothetical
protein Y41C4A.4e protein.
Length = 306
Score = 27.5 bits (58), Expect = 9.0
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 4/34 (11%)
Frame = +1
Query: 574 GKIQLERKRQ----RNRVAASKCRRRKLERISKL 663
G+ + RKRQ +NR AA +CRR+K E + L
Sbjct: 240 GEDESNRKRQVRLLKNREAAKECRRKKKEYVKCL 273
>AL032627-6|CAD56255.1| 331|Caenorhabditis elegans Hypothetical
protein Y41C4A.4d protein.
Length = 331
Score = 27.5 bits (58), Expect = 9.0
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 4/34 (11%)
Frame = +1
Query: 574 GKIQLERKRQ----RNRVAASKCRRRKLERISKL 663
G+ + RKRQ +NR AA +CRR+K E + L
Sbjct: 265 GEDESNRKRQVRLLKNREAAKECRRKKKEYVKCL 298
>AL032627-5|CAD45607.2| 314|Caenorhabditis elegans Hypothetical
protein Y41C4A.4c protein.
Length = 314
Score = 27.5 bits (58), Expect = 9.0
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 4/34 (11%)
Frame = +1
Query: 574 GKIQLERKRQ----RNRVAASKCRRRKLERISKL 663
G+ + RKRQ +NR AA +CRR+K E + L
Sbjct: 248 GEDESNRKRQVRLLKNREAAKECRRKKKEYVKCL 281
>AL032627-4|CAB54382.2| 327|Caenorhabditis elegans Hypothetical
protein Y41C4A.4b protein.
Length = 327
Score = 27.5 bits (58), Expect = 9.0
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 4/34 (11%)
Frame = +1
Query: 574 GKIQLERKRQ----RNRVAASKCRRRKLERISKL 663
G+ + RKRQ +NR AA +CRR+K E + L
Sbjct: 261 GEDESNRKRQVRLLKNREAAKECRRKKKEYVKCL 294
>AL032627-3|CAB54381.2| 325|Caenorhabditis elegans Hypothetical
protein Y41C4A.4a protein.
Length = 325
Score = 27.5 bits (58), Expect = 9.0
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 4/34 (11%)
Frame = +1
Query: 574 GKIQLERKRQ----RNRVAASKCRRRKLERISKL 663
G+ + RKRQ +NR AA +CRR+K E + L
Sbjct: 259 GEDESNRKRQVRLLKNREAAKECRRKKKEYVKCL 292
>AB081596-1|BAC19843.1| 325|Caenorhabditis elegans cyclic
AMP-response element bindingprotein 1 gamma 2 protein.
Length = 325
Score = 27.5 bits (58), Expect = 9.0
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 4/34 (11%)
Frame = +1
Query: 574 GKIQLERKRQ----RNRVAASKCRRRKLERISKL 663
G+ + RKRQ +NR AA +CRR+K E + L
Sbjct: 259 GEDESNRKRQVRLLKNREAAKECRRKKKEYVKCL 292
>AB081595-1|BAC19842.1| 306|Caenorhabditis elegans cyclic
AMP-response element bindingprotein 1 beta protein.
Length = 306
Score = 27.5 bits (58), Expect = 9.0
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 4/34 (11%)
Frame = +1
Query: 574 GKIQLERKRQ----RNRVAASKCRRRKLERISKL 663
G+ + RKRQ +NR AA +CRR+K E + L
Sbjct: 240 GEDESNRKRQVRLLKNREAAKECRRKKKEYVKCL 273
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,482,254
Number of Sequences: 27780
Number of extensions: 364327
Number of successful extensions: 1144
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 1090
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1144
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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